For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVTVIGAGLTLFAVPVQIYALTQSSAYVGLTGVFGLVPLVVFGLWGGALADRMDRRTLLIITATGLAASS VLLWLQAALSVDNVWVVLCLLSVQQGFFAVNSPTRAAAIPRMLPLEQLPAANALNMTVQQFGFIAGPLLA GVLLKWVDLSTLYLIDAIACVAPIWATVRLHTMPPTGASKDLRANGSGLQDVLDGFRYLAGHKIVLMSFV VDLVAMIFGMPRILFPQIAHEGFGDPADGGTVIALLSAAISVGAVIGGVFSGWFQRIDRQGLAVVVSIVV WGLAMVGFGLTAHAPLLWLALLFLVIGGIADMVSAAFRTTILQSVATDDVRGRLQGVFTVVVAGGPRVAD FAHGAAAAAVGTTAAAAGGGALVVVGVIVAALLVPVFVRFRTSTEAQLDPQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_0940 | - | - | 100% (401) | hypothetical protein MAB_0940 |
| M. abscessus ATCC 19977 | MAB_0880 | - | 2e-24 | 25.00% (392) | hypothetical protein MAB_0880 |
| M. abscessus ATCC 19977 | MAB_2780c | - | 2e-19 | 25.13% (398) | putative transporter |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_5163 | - | 5e-17 | 26.06% (353) | protein of unknown function DUF894, DitE |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_4182 | - | 5e-11 | 22.97% (370) | hypothetical protein MMAR_4182 |
| M. avium 104 | MAV_1406 | - | 3e-09 | 23.00% (400) | transporter, major facilitator family protein |
| M. smegmatis MC2 155 | MSMEG_5674 | - | 1e-162 | 72.43% (399) | membrane transport protein |
| M. thermoresistible (build 8) | TH_1986 | - | 1e-20 | 27.27% (352) | tetracycline-resistance determinant TetV |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5800 | - | 1e-19 | 26.58% (365) | major facilitator superfamily transporter |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_0940|M.abscessus_ATCC_1997 -----------------------------------MVTVIGAGLTLFAVP
MSMEG_5674|M.smegmatis_MC2_155 ------------MRRFFADTTPLRSPDFRRLWLAGIPTVIGANLTIFAVP
MMAR_4182|M.marinum_M -------------------MRNSSRGPAFLILFATLAACAGNGISIVAFP
MAV_1406|M.avium_104 -----------------------------MILFATLLATAGTGISIVAFP
Mflv_5163|M.gilvum_PYR-GCK ----------MTSPVSTSTWAPLQSPVFRALWIAQFVSNLGTWMQTVGAQ
Mvan_5800|M.vanbaalenii_PYR-1 ----MTAEATAARLPARNALGLMFDPVFGALFWGKIFAVVAVWTHGIVAA
TH_1986|M.thermoresistible__bu VSTQYDIEPSAGTSGGWRVLAPFRIREYRLLITAVAITIFAEGMWAVVMA
: . .
MAB_0940|M.abscessus_ATCC_1997 VQIYALTQSSAYVGLTGVFGLVPLVVFGLWGGALADRMD--RRTLLIITA
MSMEG_5674|M.smegmatis_MC2_155 VQLYALTQNSAYVGLAGLFALVPLVVFGLWGGAWADAMD--RRLLLIIAS
MMAR_4182|M.marinum_M WLVLEREGSAGQASIVAGAITLPLLFSTLVAGTAVDYFG--RRPVSMVSD
MAV_1406|M.avium_104 WLALQHRHSATDASIVAAAMTLPLVLATLIAGTAVDFFG--RRRVSLVCD
Mflv_5163|M.gilvum_PYR-GCK WMLVDDPAAAVLVPLVQTATTLPVMLLALPSGVLADLVD--RRRLLIATQ
Mvan_5800|M.vanbaalenii_PYR-1 IVMYDATRSALMVGMVGVVQFAPQLILSPTSGKWADTGNPARQILLGRVL
TH_1986|M.thermoresistible__bu LQVIAIDNDPASLSLVATCMGVGLVAFVLVGGITADRIN--QRTIIIAVE
. :. : .* .* . :: :
MAB_0940|M.abscessus_ATCC_1997 TGLAASSVLLWLQAALSVDNVWVVLCLLS---VQQGFFAVNSPTRAAAIP
MSMEG_5674|M.smegmatis_MC2_155 VGLAVSSVLLWAQAALALNNVWLVLSMLS---VQQAFYAINSPTRSAAIP
MMAR_4182|M.marinum_M A-LSGSAVAIVPLIAWAFGDDAVSVAVLA---ALGACSATFDPAGITARQ
MAV_1406|M.avium_104 W-LSGAAVTAVPLTAWIFGAAAIDVAELA---VLAFCAAAFDPAGMTARQ
Mflv_5163|M.gilvum_PYR-GCK GAMAAGVGLLATLTGAGLTTPTVLLTLLF---VIGCGQALTAPAWQAIQP
Mvan_5800|M.vanbaalenii_PYR-1 CVAGSGSIAAWMFVQPGLTGLAAAVPVLLGTTLVGFGFVVGGPAMQSIVP
TH_1986|M.thermoresistible__bu AVNAVTVAVVAMLGLTGQLRIWHLAVAAA---VLGIAAAFFFPAYSALLP
. . *: :
MAB_0940|M.abscessus_ATCC_1997 RMLPLEQLPAANALN------MTVQQFGFIAGPLLAGVLLKWVDLSTLYL
MSMEG_5674|M.smegmatis_MC2_155 RMVPGEQLPAANSLN------MTVMQFGAIVGPLMAGLLLNWVDLSTLYL
MMAR_4182|M.marinum_M SMLPEAAARAGWSLDRINSSYEAILNLAFVVGPGIGGLMIATVGGITTMW
MAV_1406|M.avium_104 SMLPEAAARAGWSLDRTNSSYEAMLNLAFIVGPGLGGLLIATLGGINTMW
Mflv_5163|M.gilvum_PYR-GCK DLVPSDQIPAAAALG------SMSMNGARAIGPAIAGALVSLTGPTIVFA
Mvan_5800|M.vanbaalenii_PYR-1 NLIRAGELPTAMALN------SIPMTIGRIIGPAAGAYLAAHIGPATAFA
TH_1986|M.thermoresistible__bu RILPPEQLLAANGVEG-----VVRPVFQRAVGPAVAGMLVGATFPSLGSA
:: :. .: ** .. :
MAB_0940|M.abscessus_ATCC_1997 IDAIACVAPIWATVRLHTMPPTGASKDLRANGSGLQDVLDGFRYLAGHKI
MSMEG_5674|M.smegmatis_MC2_155 IDAITCLAPIWATFRLTPMPVGNAER--GSARWGFGAVLEGFRYLAGNRV
MMAR_4182|M.marinum_M ITAGAFGLSLLAIGALRLEGAGRPHHETRPDG-LVSGVTQGLRFVWNLRV
MAV_1406|M.avium_104 VTAGCFALSFLAIGALRLEGAGKPPRATRPVG-LVTGIAEGVRFVWNLRV
Mflv_5163|M.gilvum_PYR-GCK LNAVSFVGIVLVLMWWRRP----PVRSDYPPERALAALSAGGRYIRSSPI
Mvan_5800|M.vanbaalenii_PYR-1 VSTVLHLVFAFFLLAVRFP-----APPERRAGTDYRVRVAVRYVLRDRPL
TH_1986|M.thermoresistible__bu VVATLFGVGLVLLVATRPP--ASPSVPGEHRSRVLRDLRDGFMFMVATPW
: : :
MAB_0940|M.abscessus_ATCC_1997 VLMSFVVDL--VAMIFGMPRILFPQIAHEGFG-DPADGGTVIALLSAAIS
MSMEG_5674|M.smegmatis_MC2_155 VLMSFVVDL--IAMIFGMPRALFPQMAHESFG-GPVEGGTVMALLAAAMS
MMAR_4182|M.marinum_M LRALALIDLTVTALYLPMESVLFPTYFSDRQ--QPAQLGSVLVALSLGSL
MAV_1406|M.avium_104 LRTLGLIDLAVTALYLPMESVLFPKYFADQH--QPAQLGWALMALALGGV
Mflv_5163|M.gilvum_PYR-GCK VRRILLRTVLFIAPGSAVWGLLPVIARDQLGL-GSAGYGALLGALGVGAV
Mvan_5800|M.vanbaalenii_PYR-1 LLALVAVTT--VGIVSDPSITLTPSMADELGG-GASLVGTLSAVFGVGAA
TH_1986|M.thermoresistible__bu LLWTLLFASVFVLVVLGPIEVLLPFIAQERFTDGARMYGFVLAAFGVGSA
: * : . * :. .
MAB_0940|M.abscessus_ATCC_1997 VGAVIGGVFSGWFQRIDRQGLAVVVSIVVWGLAMVGFGLT---AH---AP
MSMEG_5674|M.smegmatis_MC2_155 AGAVLGGVFSGWLPRVRRQGLAVVVAIVVWGVAMVGFGIAGGLAHGTAGL
MMAR_4182|M.marinum_M VGALGYGMLSNYVSRR----TIMLTAVLTLGAATTGIALL---------P
MAV_1406|M.avium_104 AGALGYAVLSARLRRR----TAVLTATLTFGATTAGIAVL---------P
Mflv_5163|M.gilvum_PYR-GCK LGAFALSRLRARFGQN----KLLIAGAAGFGMATAVLALVHN--------
Mvan_5800|M.vanbaalenii_PYR-1 VGMTALALLRGRIGSA----VVSSIGMAALAAGSAILAVA---------M
TH_1986|M.thermoresistible__bu VGALTVSSRQ--MPRR-----YLTVMMLMWALGSVPLLVIG------FTW
* . . . . : :
MAB_0940|M.abscessus_ATCC_1997 LLWLALLFLVIGGIADMVSAAFRTTILQSVATDDVRGRLQGVFTVVVAGG
MSMEG_5674|M.smegmatis_MC2_155 VLWIALAFLAVGGAADMVSAAFRSTILQQAASDDLRGRLQGVFTVVVAGG
MMAR_4182|M.marinum_M PLPVILVLCALIGVVYGPIQPIYNYVMQTRAPHYLRGRVVGVMTSLAYAA
MAV_1406|M.avium_104 PLPVILGLCAVTGVVYGPIQPIYNFVMQTRAPHHLRGRVVGVMAGLTYAA
Mflv_5163|M.gilvum_PYR-GCK -VALVAAALVVGGAAWLLTLSTLNASMQLSLPSWVRARGLSVYQLIFMGG
Mvan_5800|M.vanbaalenii_PYR-1 EPWVALTGFAVSGFGFGCAMTGLSTVVQERAPEELRGRIMALWLVGFLGS
TH_1986|M.thermoresistible__bu SFLLMSAASFAIGVTDGAGMVIWGTLLQRRVPRELLGRVSSLDFFVSLVF
: * :* . : .* .:
MAB_0940|M.abscessus_ATCC_1997 PRVADFAHGAAAAAVGTTAAAAGGGALVVVG-------------------
MSMEG_5674|M.smegmatis_MC2_155 PRLADTLHGAAAAAVGTTVAAAGGGVLVVVG-------------------
MMAR_4182|M.marinum_M GPLGLLLAGPVADAAGLKVAFFALALPIAIT-------------------
MAV_1406|M.avium_104 GPLGLLVAGPLADAAGLKATFLTLAVPILAI-------------------
Mflv_5163|M.gilvum_PYR-GCK QAVGSLLWGLLAGGTSSVISLLVSAGLLIFCGLSLWWWPLHAGTGNLDLT
Mvan_5800|M.vanbaalenii_PYR-1 RPIAAAVLGGTADVLSVYAAFAVAAALSLAV-------------------
TH_1986|M.thermoresistible__bu MPVSFAIAGPLSKVVSMQTIFLVAGLAPLLFA------------------
:. * : . .
MAB_0940|M.abscessus_ATCC_1997 -----------------------------------VIVAALLVPVFVRFR
MSMEG_5674|M.smegmatis_MC2_155 -----------------------------------VVIAALAVPAFVRYR
MMAR_4182|M.marinum_M -----------------------------------GLMCIRLPSLRELDH
MAV_1406|M.avium_104 -----------------------------------GVVACGLPSLRELDR
Mflv_5163|M.gilvum_PYR-GCK PSSHWPEPTLLFEPEPLDGPVLVITAYRVLPENEEPFMSAMARLGRSRQR
Mvan_5800|M.vanbaalenii_PYR-1 -----------------------------------TLLCRPAKLVGPIPD
TH_1986|M.thermoresistible__bu -----------------------------------VVAMTAARMPRDELE
.
MAB_0940|M.abscessus_ATCC_1997 T-------STEAQLDPQ---------------------------------
MSMEG_5674|M.smegmatis_MC2_155 VTVAEPRVSRDVESDSV---------------------------------
MMAR_4182|M.marinum_M AP------TQDISETSLL--------------------------------
MAV_1406|M.avium_104 AP------QFADDPGA----------------------------------
Mflv_5163|M.gilvum_PYR-GCK TGASMWQLFRSIEQESTFVETFIVRSWGEHMHQHYTRLTGQDQLIEQDVE
Mvan_5800|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_1986|M.thermoresistible__bu HPLN----------------------------------------------
MAB_0940|M.abscessus_ATCC_1997 -------------------
MSMEG_5674|M.smegmatis_MC2_155 -------------------
MMAR_4182|M.marinum_M -------------------
MAV_1406|M.avium_104 -------------------
Mflv_5163|M.gilvum_PYR-GCK RYTEGEAVAEHYLAVRDAR
Mvan_5800|M.vanbaalenii_PYR-1 -------------------
TH_1986|M.thermoresistible__bu -------------------