For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_0450c (-)

annotation: ABC transporter
coordinates: 453419 - 454726
length: 435

TDAHLRAPGTGQTVFGQFRSFDRPSQILMVNQFAINVGFYMLMPYLAGYLAGPLGLAAWMVGLVLGVRNF
SQQGMFLVGGTLADRFGYKPLIVAGCFLRTAGFAMLAFVGTLPAILIASAATGFAGALFNPAVRAYLAAD
SGERRVEAFAVFNVFYQAGILFGPIVGLALTAWDFRITCAVAAAVFAFLTVIQLMALPPNRAESERNADR
APVLTSWRSVVSNKAFLLFSGAMIGSYVLTFQVYLALPLQAALLTDDKKSETALVTSIFVVSGLVAIAGQ
VRLTGWLSARFGPSRSLVLGMLVIGTAFVPLALLPTAASAGQLAAIAALLFSAALLAVGTIATFPFEMDT
VVRLADNRLVATHYGLYNTIVGIGILAGNLLTGSVFGYSQQHGVPSLLWVSLEVVALVCAAALLALRRAG
LLDPGRASGVGGDR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_0450c--100% (435)ABC transporter
M. abscessus ATCC 19977MAB_1274-0.096.44% (421) ABC transporter permease
M. abscessus ATCC 19977MAB_4615-3e-1227.86% (402) major facilitator transporter

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0872-1e-13658.90% (399) integral membrane transport protein
M. gilvum PYR-GCKMflv_0900-1e-14563.17% (410) major facilitator transporter
M. tuberculosis H37RvRv0849-1e-13658.90% (399) integral membrane transport protein
M. leprae Br4923MLBr_01562-6e-0728.03% (132) putative transmembrane efflux protein
M. marinum MMMAR_4767-1e-14162.69% (402) integral membrane transport protein
M. avium 104MAV_3974-8e-0721.00% (319) permease of the major facilitator superfamily protein
M. smegmatis MC2 155MSMEG_6390-5e-0926.03% (388) transporter, major facilitator family protein
M. thermoresistible (build 8)TH_1753-2e-0926.14% (394) major facilitator superfamily protein MFS_1, putative
M. ulcerans Agy99MUL_0338-1e-13961.94% (402) integral membrane transport protein
M. vanbaalenii PYR-1Mvan_5855-1e-14464.23% (411) major facilitator superfamily transporter

CLUSTAL 2.0.9 multiple sequence alignment


Mb0872|M.bovis_AF2122/97            ------------MGARAIFRGFNRPSRVLMINQFGINIG-----------
Rv0849|M.tuberculosis_H37Rv         ------------MGARAIFRGFNRPSRVLMINQFGINIG-----------
MMAR_4767|M.marinum_M               ------------MGFLAQFRSFNRPSRVLMINQFGINVG-----------
MUL_0338|M.ulcerans_Agy99           ------------MGFLAQFRSFNRPSRVLMINQFGINVG-----------
Mflv_0900|M.gilvum_PYR-GCK          ------------MTLLSGFGSFGWPSRMLMINQFGINLG-----------
Mvan_5855|M.vanbaalenii_PYR-1       ------------MNLVSGFRSFGWPSRMLMINQFGINLG-----------
MAB_0450c|M.abscessus_ATCC_199      MTDAHLRAPGTGQTVFGQFRSFDRPSQILMVNQFAINVG-----------
TH_1753|M.thermoresistible__bu      --------VSTSPATTTTAATDPAPPRGALGLMFDPVFGGLFWG------
MSMEG_6390|M.smegmatis_MC2_155      ------------MRRYLAATFSALTIRDYRRYALGQTIS-----------
MAV_3974|M.avium_104                --------------------------------MVALGYG-----------
MLBr_01562|M.leprae_Br4923          ---MVTLYDHERAVHNWTAARSDRPAPSRLTQQVEPASERTSKYPTLLPS
                                                                     .                

Mb0872|M.bovis_AF2122/97            ----------FYMLMPYLADYLAGPLGLAAWAVGLVMGVRNFSQQG----
Rv0849|M.tuberculosis_H37Rv         ----------FYMLMPYLADYLAGPLGLAAWAVGLVMGVRNFSQQG----
MMAR_4767|M.marinum_M               ----------FYMLMPYLADYLAGPLGLAAWAVGLVMGVRNFSQQG----
MUL_0338|M.ulcerans_Agy99           ----------FYMLMPYLADYLAGPLGLAAWAVGLVMGVRNFSQQG----
Mflv_0900|M.gilvum_PYR-GCK          ----------FYMLMPYLAGYLAGPLGLAAWAIGLVLGVRNFSQQG----
Mvan_5855|M.vanbaalenii_PYR-1       ----------FYMLMPYLAGYLAGPLGLAAWAIGLVLGVRNFSQQG----
MAB_0450c|M.abscessus_ATCC_199      ----------FYMLMPYLAGYLAGPLGLAAWMVGLVLGVRNFSQQG----
TH_1753|M.thermoresistible__bu      --------KILSVVAVWTHGIVAAITMFNATGSAVMVGLVGVAQFGPQL-
MSMEG_6390|M.smegmatis_MC2_155      ------------VSGTWMQKLTQAWLVLELTDSPLLLGVTVAGQQLPTL-
MAV_3974|M.avium_104                ------------VISPALPTFAR-SFGVSIKAVTFLVTVFSLSRLC----
MLBr_01562|M.leprae_Br4923          GRFPSGRFIAAVIVIGGMQLLATMDSTVAIVALPKIQNELSLSDAGRSWG
                                                :              .       :      .       

Mb0872|M.bovis_AF2122/97            ----------MFFVGGTLADRFGYKPLIIA---GCLIRTGGFALLVVAQS
Rv0849|M.tuberculosis_H37Rv         ----------MFFVGGTLADRFGYKPLIIA---GCLIRTGGFALLVVAQS
MMAR_4767|M.marinum_M               ----------MFFVGGTLADRFGYKPLIVA---GCLIRTGGFALLVVAQS
MUL_0338|M.ulcerans_Agy99           ----------MFFVGGTLADRFGYKPLIVA---GCLIRTGGFALLVVAQS
Mflv_0900|M.gilvum_PYR-GCK          ----------MFIIGGTLADRLGFKPLIVS---GCVLRTAGFGLLVFADS
Mvan_5855|M.vanbaalenii_PYR-1       ----------MFIIGGTLADRLGYKPLIVA---GCVLRTVGFGLLVLADS
MAB_0450c|M.abscessus_ATCC_199      ----------MFLVGGTLADRFGYKPLIVA---GCFLRTAGFAMLAFVGT
TH_1753|M.thermoresistible__bu      ---------ILTPISGKWADVGNQARQILL---GRLLCTAGSGLIAAWLF
MSMEG_6390|M.smegmatis_MC2_155      ---------LFTTLAGVLADRYSKRTILLWTALGGMLPALVLGVLVWIDV
MAV_3974|M.avium_104                ----------FAPISGLLTERLGERRIYIG---GLLIVAVSTAACAFSQA
MLBr_01562|M.leprae_Br4923          ITAYVLTFGGLMLLGGRLGDTIGRKRTFIV---GVALFTISSVLCAVAWD
                                              :  :.*   :  .     :    *  : :      .    

Mb0872|M.bovis_AF2122/97            LP----------SVLIAAAATGFAGALFNPAVRGYLAAEAGER-KIEAFA
Rv0849|M.tuberculosis_H37Rv         LP----------SVLIAAAATGFAGALFNPAVRGYLAAEAGER-KIEAFA
MMAR_4767|M.marinum_M               LP----------SVLIASAATGFAGALFNPAVRAYVAADSGDR-KLEAFA
MUL_0338|M.ulcerans_Agy99           LP----------SVLIAAAATGFAGALFNPAVRAYVAADSGDR-KLEAFA
Mflv_0900|M.gilvum_PYR-GCK          LP----------AVLVASAATGFAGALFNPAVRAYLAADAGPR-RLEAFA
Mvan_5855|M.vanbaalenii_PYR-1       LP----------AVLIASAATGFAGALFNPAVRAYLAVDAGPR-RLEAFA
MAB_0450c|M.abscessus_ATCC_199      LP----------AILIASAATGFAGALFNPAVRAYLAADSGER-RVEAFA
TH_1753|M.thermoresistible__bu      LSPHMQGVAVAVPILIGTTLVGFGFVVGGPAMQSIVPSLIRPG-ELSTAM
MSMEG_6390|M.smegmatis_MC2_155      VN--------IWIVLAAAVAQGFADAVDKPARLTFVNDIATPE-TLANAV
MAV_3974|M.avium_104                YW----------QLMLCRVFSGVGSTMFYVSALGLMIHISPAD-ARGRIA
MLBr_01562|M.leprae_Br4923          EV----------TLVIARLLQGIGSAIASPTGLALVATTFSKGSARNTAT
                                                 ::      *.. .:   :    :              

Mb0872|M.bovis_AF2122/97            MFN-VFYQSGILLGPLVG-LVLLALDFRITVLAAAGVFGLLTVAQLVALP
Rv0849|M.tuberculosis_H37Rv         MFN-VFYQSGILLGPLVG-LVLLALDFRITVLAAAGVFGLLTVAQLVALP
MMAR_4767|M.marinum_M               MFN-IFYQAGILLGPLVG-LALLTLDFRMTVLGASAVFAVLTAAQLMALP
MUL_0338|M.ulcerans_Agy99           TFN-IFYQAGILLGPLVG-LALLTLDFRMTVLGASAVFAVLTAAQLMALP
Mflv_0900|M.gilvum_PYR-GCK          LFN-VFYQAGILAGPLVG-LALMFVDFKITAAAAALVFAVLTVAQLFALP
Mvan_5855|M.vanbaalenii_PYR-1       LFN-VFYQGGILAGPLVG-LALMFVDFRATAAAAAMVFAVLTVAQLFALP
MAB_0450c|M.abscessus_ATCC_199      VFN-VFYQAGILFGPIVG-LALTAWDFRITCAVAAAVFAFLTVIQLMALP
TH_1753|M.thermoresistible__bu      ALNSLPMTVGRIAGPAVG-AYIAASFGAPTAFAVSCVLHLLFALILVALP
MSMEG_6390|M.smegmatis_MC2_155      TLNSIIQNSGKIAGPAVAGVLISAVGVSASFFLNAASYLPVVIALLLIRP
MAV_3974|M.avium_104                GLFTTSFMVGAVGGPAVG-GLAAGWGLTAPFVVYGVAMLGVALVLFLGLR
MLBr_01562|M.leprae_Br4923          AVFAAMTAIGSVMGLVVG-GALTEVSWRLAFLVNVPIGLVMIYLARTALH
                                     .       * : *  *.           .          :         

Mb0872|M.bovis_AF2122/97            QHRADSER--EKTSILQDWRVVVRNRPFLT------------LAAAMTGC
Rv0849|M.tuberculosis_H37Rv         QHRADSER--EKTSILQDWRVVVRNRPFLT------------LAAAMTGC
MMAR_4767|M.marinum_M               QHLADPGT--KNESILQGWKAIVRNRSFLG------------FAAAMTGA
MUL_0338|M.ulcerans_Agy99           QHLADPDT--KNESILQGWKAIVCNRSFLG------------FAAAMTGA
Mflv_0900|M.gilvum_PYR-GCK          QRAVAPTP--EKTSVLQDWRAVAANRSFLL------------FAAAMIGS
Mvan_5855|M.vanbaalenii_PYR-1       QRTAAPAE--AKTSVLDDWRVVAANRSFLL------------FAAAMIGS
MAB_0450c|M.abscessus_ATCC_199      PNRAESERNADRAPVLTSWRSVVSNKAFLL------------FSGAMIGS
TH_1753|M.thermoresistible__bu      FPAQTPQPAGTDYRVRTALRHVWRDRPLLL------------ALLAVT--
MSMEG_6390|M.smegmatis_MC2_155      HAPVITGNVSAKGHLGETLRYVSARPHIAA------------ALVLMAVS
MAV_3974|M.avium_104                NSALAAPP--PPTRSTVTMREALRVRAYQS------------ALLSNFAT
MLBr_01562|M.leprae_Br4923          ETHKERMKLDAAGAILATLACTAAVFAFSMGPEKGWISLTTIGSGLVALV
                                                                                      

Mb0872|M.bovis_AF2122/97            YALSFQIYLALPMQASILMP--RNQYLLIAAMFAVSG-------------
Rv0849|M.tuberculosis_H37Rv         YALSFQIYLALPMQASILMP--RNQYLLIAAMFAVSG-------------
MMAR_4767|M.marinum_M               YVLSFQVYLALPMQASLLAP--GHQSVLVAAMFAVSG-------------
MUL_0338|M.ulcerans_Agy99           YVLSFQVYLALPIQASLLAP--GHQSVLLAAMFAVSG-------------
Mflv_0900|M.gilvum_PYR-GCK          YVLSFQVYLAMPLQARYLFP--QNDSVVTAMIFVVSG-------------
Mvan_5855|M.vanbaalenii_PYR-1       YVLSFQVYLALPLQARDLFP--GSDSVVTAMIFVVSG-------------
MAB_0450c|M.abscessus_ATCC_199      YVLTFQVYLALPLQAALLTDDKKSETALVTSIFVVSG-------------
TH_1753|M.thermoresistible__bu      -TVGFASDPSITLAPSLADN-LGGGSELVGALSAAFG-------------
MSMEG_6390|M.smegmatis_MC2_155      GLLAFNWNVLLPTLARDTFG---GDARVVGFAFTSMG-------------
MAV_3974|M.avium_104                GWSAFG--LRMALVPLFVSDVMGRGIGTIGVVLAAFA-------------
MLBr_01562|M.leprae_Br4923          AAIAFAVVERTAENPVVPFDLFRDRNRLVTFIAIFLAGGVIFSLTVSIGL
                                        *      .  .                     .             

Mb0872|M.bovis_AF2122/97            --------------------LVAVGGQLRITRWFAVRWGAERSLVVGATI
Rv0849|M.tuberculosis_H37Rv         --------------------LVAVGGQLRITRWFAVRWGAERSLVVGATI
MMAR_4767|M.marinum_M               --------------------LIAIAGQLRITRWFAAHWRVSRSLVVGAAI
MUL_0338|M.ulcerans_Agy99           --------------------LIAIAGQLRITRWVAAHWRVSRSLVVGAAI
Mflv_0900|M.gilvum_PYR-GCK          --------------------VVAVLGQMRITRWFGRRWGSGRSLAIGMLI
Mvan_5855|M.vanbaalenii_PYR-1       --------------------LVAVMGQMRITRWFAKRWGAGRSLMIGMLI
MAB_0450c|M.abscessus_ATCC_199      --------------------LVAIAGQVRLTGWLSARFGPSRSLVLGMLV
TH_1753|M.thermoresistible__bu      --------------------IGAAAGMATLA-LLRGRLASARVSVIGLWL
MSMEG_6390|M.smegmatis_MC2_155      --------------------VGAVFGGLALAGVLRG---TSKWLILNGCV
MAV_3974|M.avium_104                --------------------GGNAL-AVVPSGYLSDRMGRRTLLIVGLVT
MLBr_01562|M.leprae_Br4923          YIQDILGYSALRAGIGFIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGWL
                                                                  :  .            .   

Mb0872|M.bovis_AF2122/97            LAASFIP-----VAVIPNGQRFGVAVAVMALVLSASLLAVASAALFPFEM
Rv0849|M.tuberculosis_H37Rv         LAASFIP-----VAVIPNGQRFGVAVAVMALVLSASLLAVASAALFPFEM
MMAR_4767|M.marinum_M               LAIAFVP-----LAMVPNAQRFGTGAAVAALLVSASLLAVASAALFPFEM
MUL_0338|M.ulcerans_Agy99           LAMAFVP-----LAMVPNAQRFGTGAAVAALLVSASLLAVASAALFPFEM
Mflv_0900|M.gilvum_PYR-GCK          LALSFLP-----LIALPDDERAGRVAAATALLIATAVLAVGSAAVFPFEM
Mvan_5855|M.vanbaalenii_PYR-1       LAVSFVP-----LMALPDDTRAGRVAAATALLGATAVLAVGSAAVFPFEM
MAB_0450c|M.abscessus_ATCC_199      IGTAFVP-----LALLPTAASAGQLAAIAALLFSAALLAVGTIATFPFEM
TH_1753|M.thermoresistible__bu      LGAGSLV-----LALSTVTAVALAGFVVAGVGFGWAMTGLSTVVQERAPD
MSMEG_6390|M.smegmatis_MC2_155      LGAALAL-----TGLMPTVTIAYALLFVVGAASVTFRSTATTLLQLYSDP
MAV_3974|M.avium_104                SGAATVW-----LGFVASLPVFLVAAGVVGVVTGIYMSPLQAAVADILGN
MLBr_01562|M.leprae_Br4923          LMVAMLYGWAFMNRGVPYFPNLLAPIVVGGIGIGMAVVPLTLSAIAGVGF
                                       .            .            .                    

Mb0872|M.bovis_AF2122/97            RAVVAL-SGDRLVATHYGFYSTIVGVGVLVG------------NLAIGSL
Rv0849|M.tuberculosis_H37Rv         RAVVAL-SGDRLVATHYGFYSTIVGVGVLVG------------NLAIGSL
MMAR_4767|M.marinum_M               RTVVVL-AEDKLVATHYGFYSTIVGVGILVG------------NLVVGSL
MUL_0338|M.ulcerans_Agy99           RTVVVL-AEDKLVATNYGFYSTIVGVGILVG------------NLAVGSL
Mflv_0900|M.gilvum_PYR-GCK          DTVVSL-ADNRLVGTHYGFYNTIVGVGILVG------------NLATGSL
Mvan_5855|M.vanbaalenii_PYR-1       DTVVSL-AGNRLVGTHYGFYNTIVGVGILVG------------NLATGYL
MAB_0450c|M.abscessus_ATCC_199      DTVVRL-ADNRLVATHYGLYNTIVGIGILAG------------NLLTGSV
TH_1753|M.thermoresistible__bu      ELRGRI-MALWLVGFLGSRPIAAAVLGGTAD------------TISVAAA
MSMEG_6390|M.smegmatis_MC2_155      GVRGRI-ISLLVLATNGTTPVGGPMIGWICT------------HANPRVA
MAV_3974|M.avium_104                EARAGLPVATVQMMSDLGAIVGSMAVGWAAE------------QIGYGWG
MLBr_01562|M.leprae_Br4923          DRIGPVSAIALMLQSLGGPLVLAVIQAVITSRTLYLGGTTGPVKFMNDAQ
                                         :      :             .                       

Mb0872|M.bovis_AF2122/97            MSAARRLNTDEIVWGGLILVGIVAVAGLRRLDTFT-SGSQNMTGRWAAPR
Rv0849|M.tuberculosis_H37Rv         MSAARRLNTDEIVWGGLILVGIVAVAGLRRLDTFT-SGSQNMTGRWAAPR
MMAR_4767|M.marinum_M               MSVAHRFGADEIVWGGLILIGLATVAGLYQLDRQA-TRADRLSRRHPPAQ
MUL_0338|M.ulcerans_Agy99           MSVAHRFGADEIVWGGLILIGLATVAGLYQLDRQA-TRAERLSRRHPPAQ
Mflv_0900|M.gilvum_PYR-GCK          MQLARELGRPEFLWVLLTVIGMLSAAALYRLDQRGRLGSTPKAVDDATPR
Mvan_5855|M.vanbaalenii_PYR-1       MQAAKRVGAPELLWVLLCAIGAVSALALYRLDRRGLLQPAKSTPDRAVAR
MAB_0450c|M.abscessus_ATCC_199      FGYSQQHGVPSLLWVSLEVVALVCAAALLALRRAGLLDPGRASGVGGDR-
TH_1753|M.thermoresistible__bu      FALAALSVAVIAVLCRPATLGRPAPFEPVPVGGGS-TGADRARSNMVVTN
MSMEG_6390|M.smegmatis_MC2_155      CLVGGLGTVAAALAHWAYLRKAGTRKDPIPL-------------------
MAV_3974|M.avium_104                FFISGVVLLIAAVGWVMAPETRTATELEADLMAASRTSSRCEQQL-----
MLBr_01562|M.leprae_Br4923          LRALDHGYTYGLLWVAGAVVIVGVAALFIGYTPEQVAYAQEVKEAVDAGE
                                                :                                     

Mb0872|M.bovis_AF2122/97            ------
Rv0849|M.tuberculosis_H37Rv         ------
MMAR_4767|M.marinum_M               LCQQAA
MUL_0338|M.ulcerans_Agy99           LCQQAA
Mflv_0900|M.gilvum_PYR-GCK          ------
Mvan_5855|M.vanbaalenii_PYR-1       ------
MAB_0450c|M.abscessus_ATCC_199      ------
TH_1753|M.thermoresistible__bu      PAEL--
MSMEG_6390|M.smegmatis_MC2_155      ------
MAV_3974|M.avium_104                ------
MLBr_01562|M.leprae_Br4923          L-----