For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4138 | - | - | 100% (328) | putative acyl-CoA dehydrogenase |
| M. thermoresistible (build 8) | TH_3023 | - | e-144 | 79.43% (316) | PUTATIVE putative acyl-CoA dehydrogenase |
| M. thermoresistible (build 8) | TH_2022 | - | 7e-21 | 28.52% (270) | putative acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3594 | fadE33 | 3e-18 | 29.69% (293) | acyl-CoA dehydrogenase FADE33 |
| M. gilvum PYR-GCK | Mflv_2434 | - | 4e-18 | 30.15% (272) | acyl-CoA dehydrogenase domain-containing protein |
| M. tuberculosis H37Rv | Rv3564 | fadE33 | 3e-18 | 29.69% (293) | acyl-CoA dehydrogenase FADE33 |
| M. leprae Br4923 | MLBr_00737 | fadE25 | 1e-05 | 27.93% (111) | putative acyl-CoA dehydrogenase |
| M. abscessus ATCC 19977 | MAB_0593c | - | 2e-16 | 34.91% (169) | acyl-CoA dehydrogenase FadE |
| M. marinum M | MMAR_4749 | - | 2e-18 | 38.12% (160) | acyl-CoA dehydrogenase |
| M. avium 104 | MAV_1823 | - | 1e-144 | 78.37% (319) | putative acyl-CoA dehydrogenase |
| M. smegmatis MC2 155 | MSMEG_4845 | - | 9e-20 | 27.78% (270) | putative acyl-CoA dehydrogenase |
| M. ulcerans Agy99 | MUL_4129 | fadE33 | 3e-16 | 30.10% (299) | acyl-CoA dehydrogenase FadE33 |
| M. vanbaalenii PYR-1 | Mvan_4218 | - | 1e-20 | 30.00% (270) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3594|M.bovis_AF2122/97 -------MTPP--EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESL
Rv3564|M.tuberculosis_H37Rv -------MTPP--EERQMLRETVASLVAKHAGPAAVRAAMASDRGYDESL
MUL_4129|M.ulcerans_Agy99 -------MT----EEREMLRETVAALVNKHASPAAVRSAMESERGYDETL
MAB_0593c|M.abscessus_ATCC_199 -------MSPSGNTERQMLRDTVRSLVTKRADSAAVRTAFESERGYDENL
TH_4138|M.thermoresistible__bu ----MTAS-----QVDESWPMVEEAVFRLFDEIAAKQDHVAIDPLLSELG
MAV_1823|M.avium_104 ----MSTSTQGTNPEDEAWPMIEEAVFRLFDELAAKGEHTVIGPRLNELG
Mflv_2434|M.gilvum_PYR-GCK ----MTVAIKDDAAMDEASLGMLEASLRKTMS---SASGPKLDAALTELG
Mvan_4218|M.vanbaalenii_PYR-1 ----------MAPGMDEASLDMLEASLRKTML---SSSGPELDAALTEMG
MSMEG_4845|M.smegmatis_MC2_155 --------------MDAESLGLLEETLRKTML---SASGAKLDAALAELG
MMAR_4749|M.marinum_M -----------MDLTDPESLRLLADSLKTAVTQNPSPSGAGLDAALQALG
MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFPEE
Mb3594|M.bovis_AF2122/97 WRLLCEQVGAAALVIPEELGGAGGELADAAIVVQELGRALVPSPLLGTT-
Rv3564|M.tuberculosis_H37Rv WRLLCEQVGAAALVIPEELGGAGGELADAAIVVQELGRALVPSPLLGTT-
MUL_4129|M.ulcerans_Agy99 WRLLCEQVGAAALVIPEELGGAGGELADAAIVLQELGRALVPSPLLGTT-
MAB_0593c|M.abscessus_ATCC_199 WAVLCEQVGAAALLIPEESGGAGGELADAAVVVEELGRGLVPSPLMGTL-
TH_4138|M.thermoresistible__bu WADIESEYPVEACALLFRAQGRSLALTDALDRVMIAEMASLVEEPVDCV-
MAV_1823|M.avium_104 WAEIESEYPVEACALLFRAQGRSLALTDALDRIMLAELASLFDEPVDAI-
Mflv_2434|M.gilvum_PYR-GCK WADMLTEAPELAIPLYFRLLGETGSHASILVDVVLHATG-----------
Mvan_4218|M.vanbaalenii_PYR-1 WADMLSEVPELAVPLVFRLLGETGSHASVLVDVVLHATG-----------
MSMEG_4845|M.smegmatis_MC2_155 WAEMLSDMPEVAMPLVFRLLGETGSHASVLNDVLLETIG-----------
MMAR_4749|M.marinum_M WLDMLDEIPGTAVPLVFAMLGENGVHAPLVNDVVARAAG-----------
MLBr_00737|M.leprae_Br4923 ALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN
* : * . :
Mb3594|M.bovis_AF2122/97 ---LAELALLAAAKPDAQALTELAQGSAIGALVL----------------
Rv3564|M.tuberculosis_H37Rv ---LAELALLAAAKPDAQALTELAQGSAIGALVL----------------
MUL_4129|M.ulcerans_Agy99 ---LAELALLAAAEPDAKTLAGLAEGSSIGALVL----------------
MAB_0593c|M.abscessus_ATCC_199 ---WAELALLEAGY-EGELLEALAAGESIGAVAF----------------
TH_4138|M.thermoresistible__bu ---VLPALAQASVPSSNEGQVKGIVLGPLRGRVL----------------
MAV_1823|M.avium_104 ---VLPELTHGHTPSSTEDQVKGVVLGPLRGRVA----------------
Mflv_2434|M.gilvum_PYR-GCK --------------------------NAIGDTVE----------------
Mvan_4218|M.vanbaalenii_PYR-1 --------------------------NTIGDTVE----------------
MSMEG_4845|M.smegmatis_MC2_155 --------------------------GLPGGTP-----------------
MMAR_4749|M.marinum_M --------------------------CPGGGTV-----------------
MLBr_00737|M.leprae_Br4923 KLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRA
Mb3594|M.bovis_AF2122/97 -------------------------------DPDYVVNGDIADIVVAATS
Rv3564|M.tuberculosis_H37Rv -------------------------------DPDYVVNGDIADIVVAATS
MUL_4129|M.ulcerans_Agy99 -------------------------------DPDYVLNGDTADVVVASTE
MAB_0593c|M.abscessus_ATCC_199 -------------------------------DPGYVVNGDIADVVLTVQG
TH_4138|M.thermoresistible__bu -------------------------------VPVSGAMGTVSATVVDADQ
MAV_1823|M.avium_104 -------------------------------VPVSRAMGTVSIAVVDADR
Mflv_2434|M.gilvum_PYR-GCK -------------------------------LPLPYAGN--AWVVWDRGG
Mvan_4218|M.vanbaalenii_PYR-1 -------------------------------LPLPYAGN--GWVVWDRGG
MSMEG_4845|M.smegmatis_MC2_155 --------------------------------PMPYAGG--GWVVWERRD
MMAR_4749|M.marinum_M --------------------------------PLPFAGG--SWVIWSRGD
MLBr_00737|M.leprae_Br4923 KADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAFIVHKDDE
* . . :
Mb3594|M.bovis_AF2122/97 -------GQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADT
Rv3564|M.tuberculosis_H37Rv -------GQLTRWTRFSAQPVATMDPTRRLARLQSEETEPLCPDPGIADT
MUL_4129|M.ulcerans_Agy99 -------GQLSRWTRFSAHRVATMDPTRRLAQLRAEETAFLGENPGLADA
MAB_0593c|M.abscessus_ATCC_199 -------ETVCRAGQVTALALSTLDPTRRLASIAVGAAEPVGTAPGLIDK
TH_4138|M.thermoresistible__bu -------LRATRLNTFDSSVVWTRVEGATDGELVDASTE----WARAVAA
MAV_1823|M.avium_104 -------LRGERMDTFDPSVVWSCVEGSTDGPLLDASTE----WGRAIAA
Mflv_2434|M.gilvum_PYR-GCK -------ASEATGEDRGPESLDPTLG---GLPLRREEEG----YPIRVAE
Mvan_4218|M.vanbaalenii_PYR-1 -------ASEATGDDRSPESLDPTLG---GLPLRREEEG----YPIRLAE
MSMEG_4845|M.smegmatis_MC2_155 -------STDS------ADSANPTLG---GLPLRKVPDG----QLLRISE
MMAR_4749|M.marinum_M -------QAGS--------VLDGELP---ILRVEPADPL----PPAALAA
MLBr_00737|M.leprae_Br4923 GFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIGEPGTGFKTALATLDH
:
Mb3594|M.bovis_AF2122/97 AAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVT
Rv3564|M.tuberculosis_H37Rv AAILLAAEQIGAAERCLQLTVEYAKSRVQFGRPIGSFQALKHRMADLYVT
MUL_4129|M.ulcerans_Agy99 AGILLAAEQIGAAERCLELTVEYAKSRVQFGRPIGSFQALKHRMADLYVE
MAB_0593c|M.abscessus_ATCC_199 AGLLLAAEQVGAAARALDLTVEYTKTRVQFGRAIGSFQALKHRMADLYVL
TH_4138|M.thermoresistible__bu AHRALATELIALADRALQIAVEHVSVRVQFGSPIGSLQSPRHLLAAAAAK
MAV_1823|M.avium_104 AHRSLATEVIALADQALRIAVDHISVRVQFGSPIGSLQSPRHALADAAAR
Mflv_2434|M.gilvum_PYR-GCK ARVAVGWWLVGSARAMLALARQHALDRVQFGKPIAGFQAVRHRLAETLVA
Mvan_4218|M.vanbaalenii_PYR-1 ARVAVGWWLVGSARAMLSLARQHALDRVQFGKPIASFQAVRHRLAETLVA
MSMEG_4845|M.smegmatis_MC2_155 ARRALGWWLVGSARAMLALARQHAMDRVQFGAPIATFQAVRHRLAETLVA
MMAR_4749|M.marinum_M GRSAVGWWLAGASRAMLELARRHALDRNQFGHPIAAFQAVRHRLAEALVA
MLBr_00737|M.leprae_Br4923 TRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMAMK
:. . : * : : * *** .*. :*: :. :*
Mb3594|M.bovis_AF2122/97 IAAARAVVADACHAPTP------TNAATARLAASEALSTAAAEGIQLHGG
Rv3564|M.tuberculosis_H37Rv IAAARAVVADACHAPTP------TNAATARLAASEALSTAAAEGIQLHGG
MUL_4129|M.ulcerans_Agy99 VAAARAVVTEACTAPTP------TSAATARLAACEALCAVAAEGIQLHGG
MAB_0593c|M.abscessus_ATCC_199 VESARATVYQAIHDLTP------EGATVARIKASEALSAVSGDSIQLHGG
TH_4138|M.thermoresistible__bu LEGARALLDDSWHYGGV------LSAQVAKVSAGRAHRAVSDAVLQVCGA
MAV_1823|M.avium_104 LEGARAVLSESWRYGGL------LSAQTAKVAAGRAHRAVSDAVLQVCGA
Mflv_2434|M.gilvum_PYR-GCK IEGAEATLSLPSADNPD------LSSLLAKAAAGKAALTAAKNCQQVLGG
Mvan_4218|M.vanbaalenii_PYR-1 IEGAEATLSLPGADNPD------LTALLAKAAAGKAALTAAMHCQQVLGG
MSMEG_4845|M.smegmatis_MC2_155 IEGAEATLSQPNADNVD------LTSLLAKAAAGKAALTAARHCQQVLGG
MMAR_4749|M.marinum_M IEGAEATLRAATDQPDE------LACLLAKAAAGQAALTTARHCQQVLAG
MLBr_00737|M.leprae_Br4923 VEAARLIVYAAAARAERGEPDLGFISAASKCFASDIAMEVTTDAVQLFGG
: .*. : . . :: * .: *: ..
Mb3594|M.bovis_AF2122/97 IAITWEHDMHLYFKRAHGSAQLLESPREVLRRLESEVWES-P--------
Rv3564|M.tuberculosis_H37Rv IAITWEHDMHLYFKRAHGSAQLLESPREVLRRLESEVWES-P--------
MUL_4129|M.ulcerans_Agy99 IAITWEHDMHLYFKRAHGSTHLLASPPELLRRLESEALGAGPSIP-----
MAB_0593c|M.abscessus_ATCC_199 IAITWEHDAHLYFKRAHGSALLLGTPRQLLPNLETAAGL-----------
TH_4138|M.thermoresistible__bu VGLTAEHDLHRYVRRGMQIDSLCGSYRQLESLLADRLSAIYAPGRALPAI
MAV_1823|M.avium_104 IGLTAEHDLHRYVSRGFQIDALCGSYLQLESLLAERLFDIYAPGRALPAI
Mflv_2434|M.gilvum_PYR-GCK IGFTEEHGLQHHVKRTLVLDGLLGSSRELTRRAGAGLRARGSVPRLAQL-
Mvan_4218|M.vanbaalenii_PYR-1 IGFTEEHHLHRHVKRALVLDGLLGSSRELTRRAGAGLRARGSAPRLAQL-
MSMEG_4845|M.smegmatis_MC2_155 IGFTAEHELHTHVERVLVLDGLLGNARELTRKAGSGMRARGTAPRMAQV-
MMAR_4749|M.marinum_M MGFTAEHQLHHHVKRSLVLDGLLGSSRELTREAGAVLRTKGFAPRLAQL-
MLBr_00737|M.leprae_Br4923 AGYTSDFPVERFMRDAKITQIYEGTN-QIQRVVMSRALLR----------
. * :. . .. . ::
Mb3594|M.bovis_AF2122/97 ----
Rv3564|M.tuberculosis_H37Rv ----
MUL_4129|M.ulcerans_Agy99 ----
MAB_0593c|M.abscessus_ATCC_199 ----
TH_4138|M.thermoresistible__bu INVN
MAV_1823|M.avium_104 VNWD
Mflv_2434|M.gilvum_PYR-GCK ----
Mvan_4218|M.vanbaalenii_PYR-1 ----
MSMEG_4845|M.smegmatis_MC2_155 ----
MMAR_4749|M.marinum_M ----
MLBr_00737|M.leprae_Br4923 ----