For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3909 | - | - | 100% (317) | acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_4629 | - | e-116 | 65.82% (316) | PUTATIVE putative acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_3001 | - | 9e-40 | 34.78% (322) | PUTATIVE putative acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3593 | fadE32 | 2e-12 | 26.32% (304) | acyl-CoA dehydrogenase FADE32 |
M. gilvum PYR-GCK | Mflv_5167 | - | 2e-46 | 38.49% (304) | acyl-CoA dehydrogenase domain-containing protein |
M. tuberculosis H37Rv | Rv3563 | fadE32 | 3e-12 | 26.32% (304) | acyl-CoA dehydrogenase FADE32 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 1e-09 | 35.78% (109) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_0594c | - | 1e-14 | 26.67% (300) | acyl-CoA dehydrogenase FadE |
M. marinum M | MMAR_3512 | - | 4e-45 | 35.85% (318) | acyl-CoA dehydrogenase |
M. avium 104 | MAV_2553 | - | 1e-115 | 63.17% (315) | acyl-CoA dehydrogenase, C- |
M. smegmatis MC2 155 | MSMEG_2878 | - | 1e-45 | 35.81% (310) | putative acyl-CoA dehydrogenase |
M. ulcerans Agy99 | MUL_2756 | - | 2e-44 | 35.22% (318) | acyl-CoA dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_2875 | - | 2e-48 | 36.79% (318) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3593|M.bovis_AF2122/97 --------MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPG Rv3563|M.tuberculosis_H37Rv --------MTMEFALNEQQRDFAASIDAALGAADLPGVVRAWAAGDVAPG MAB_0594c|M.abscessus_ATCC_199 ----------MKFDLDTQQRDFAASIDAALSVADVPAAARAWAAGNHGPG TH_3909|M.thermoresistible__bu --------------------------------------------VPEQFD MAV_2553|M.avium_104 -MSALAGGVFAVTGSQDDDAELRQLVDDLG--RRSYDAGLGRRGIPDQFD MMAR_3512|M.marinum_M ----------MSATVHTVDPALVDMMEAVF--AQYRTSH--PPTEASRRD MUL_2756|M.ulcerans_Agy99 ----------MSATVHTVDPALVNMMEAVF--AQYRTSH--PPTEASRRD MSMEG_2878|M.smegmatis_MC2_155 ---------------MTVDAELVAMMNAVF--ADHRTAH--GPTAG---- Mflv_5167|M.gilvum_PYR-GCK -----------MTGPTSVDPDLVEMLDAVF--ADHREQLG-AQRPAATWD Mvan_2875|M.vanbaalenii_PYR-1 ------MTDVHADPGMAVDADLLEMMDAVL--ADYRQGH--PPAGVVRFD MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALA--EKEIAPHAADVDQRARFP Mb3593|M.bovis_AF2122/97 RKVWQQLANLGVTALGVAEKFDGLGASPVDLVVALERLGRWCVPG----- Rv3563|M.tuberculosis_H37Rv RKVWQQLANLGVTALGVAEKFDGLGASPVDLVVALERLGRWCVPG----- MAB_0594c|M.abscessus_ATCC_199 LAVWSTLAELGVTALAVSEKYDGIGAHPVDLVVALEGLGKWAVPG----- TH_3909|M.thermoresistible__bu TNLWHHLQESGLTRLTS---SGDVEAGPNELAVVLAGIAQHSGAI----- MAV_2553|M.avium_104 AELWRNLEDTGLTRLTS---TPDMGAGPHELAIALYGVSRHAGAV----- MMAR_3512|M.marinum_M PALWQRLEQLGLARLTGAEDSGGSGASWYEAAELLAAAVRNAVRI----- MUL_2756|M.ulcerans_Agy99 PALWQRLEQLGLARLTGAEDSGGSGASWYEAAELLAAAVRNAVRI----- MSMEG_2878|M.smegmatis_MC2_155 PELWDQLRALGLARLTGAEESGGSGAGWHEAAELMAAAVRSGVRV----- Mflv_5167|M.gilvum_PYR-GCK AGLWDRLGQLGLTRLTGSEESGGSGAGWREGAELLRAAVQNGVQV----- Mvan_2875|M.vanbaalenii_PYR-1 AELWESLHQLGLVRLTGAPGSGGSGAGWAESAALISSATRHAVRV----- MLBr_00737|M.leprae_Br4923 EEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPA * *. : . * : : Mb3593|M.bovis_AF2122/97 -----------------------PVTESIAVAPILLA-HDDRAERSHG-- Rv3563|M.tuberculosis_H37Rv -----------------------PVTESIAVAPILLA-HDDQAERSHG-- MAB_0594c|M.abscessus_ATCC_199 -----------------------PVVESVAVAPVLLSSHEDGAEPSTR-- TH_3909|M.thermoresistible__bu -----------------------PLAETDALAGWLGQRADVDLPVGPLTV MAV_2553|M.avium_104 -----------------------PLAETDALAGWLGQQAGIELPNGPLTV MMAR_3512|M.marinum_M -----------------------PLAEHDLLACWLLDAHDMGADAAVRTV MUL_2756|M.ulcerans_Agy99 -----------------------PLAEHDLLACWLLDSHDMGADAAVRTV MSMEG_2878|M.smegmatis_MC2_155 -----------------------GLPEHDLLACWLLEVAGIAVDDNTRTV Mflv_5167|M.gilvum_PYR-GCK -----------------------PLAEHDLLACWLLESAGLPVDDARRTV Mvan_2875|M.vanbaalenii_PYR-1 -----------------------PLAEHDLLACWLLEAAGLPVDDAVRTV MLBr_00737|M.leprae_Br4923 VNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRT : :* Mb3593|M.bovis_AF2122/97 -----------------LASGELIATVAMPPRVPRAVDADTAGLVLLAGD Rv3563|M.tuberculosis_H37Rv -----------------LASGELIATVAMPPRVPRAVDADTAGLVLLAGD MAB_0594c|M.abscessus_ATCC_199 -----------------LASGELIATVAAPPIAPRALDADIAGLVLIADD TH_3909|M.thermoresistible__bu AVADAEETAGYV-----RGIAPDVPWARSSAAVLLVART-ADRTLVGTVD MAV_2553|M.avium_104 AVADAETDGARV-----TGTATGVPWARACAAALLAVTT-PAGLRVGVID MMAR_3512|M.marinum_M CLLDA------------DGVATEVPWASHADRIVVIRQS-AGEYHLADVD MUL_2756|M.ulcerans_Agy99 CLLDA------------DGVATEVPWASRADRIVVIRQS-AGEYRLADVD MSMEG_2878|M.smegmatis_MC2_155 ALLDE------------SGTATAVPWASTAQRIVLVWRTQTGEHRVADVD Mflv_5167|M.gilvum_PYR-GCK CVLD-------------DGVAHGVPWASEADRIVVVWRT-NGTAQVADVA Mvan_2875|M.vanbaalenii_PYR-1 CVLDE------------AGTATAVPWAAYAGRVVAIWSD-GDSHRVADID MLBr_00737|M.leprae_Br4923 RAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAFIVHKD . . : Mb3593|M.bovis_AF2122/97 GSVTEGTPGDC---HRSVDPSRRLYEVAASGQA-----WRAPKDVVARAY Rv3563|M.tuberculosis_H37Rv GSVTEGTPGDC---HRSVDPSRRLYEVAASGQA-----WRAPKDVVARAY MAB_0594c|M.abscessus_ATCC_199 IGIREAQAGAQ---HESIDATRRVFDVQPKEAG-----ISLDT---SRAI TH_3909|M.thermoresistible__bu NATSDLADGHN---LAGEPRSRLTFDIPVEKL------AAVDSTLGVELW MAV_2553|M.avium_104 VASGDLQEGHN---LAGEPRDSVPFDVSADQL------HAVDPALGAELT MMAR_3512|M.marinum_M AQTLTITPGAN---MIGEPRNTVRADHLDLRG------VPTTGAVVSTLK MUL_2756|M.ulcerans_Agy99 AQTLTITPGAN---MIGEPRNTVRADHLDLRG------VPTAGAVVSTLK MSMEG_2878|M.smegmatis_MC2_155 AAAVRITAGAN---MIGEPRDTVSAD-VPADG------ATVSEATVTTLH Mflv_5167|M.gilvum_PYR-GCK AGDLAVTSGAN---LAGEPRDTVAADPAALTG------TTVPNALIDQLL Mvan_2875|M.vanbaalenii_PYR-1 RGSLHIAPGTN---MIGEPRDTVTADISALAPH----STAIDADLVEQLR MLBr_00737|M.leprae_Br4923 DEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIGEPGTGFKTALATL . : Mb3593|M.bovis_AF2122/97 EFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH Rv3563|M.tuberculosis_H37Rv EFGALATAAQLVGAGQALLEAAVNYAKQRTQFGRAIGSYQAIKHKLADVH MAB_0594c|M.abscessus_ATCC_199 DFGVLAISAQLIGAGQALLDRAVAYAKQRSQFGRPIGSYQAVKHKLADVH TH_3909|M.thermoresistible__bu VRGAWCRCVQTIGTLDAVVAMSVNHTAERIQFGRTLSRFQSVQHGLAAMA MAV_2553|M.avium_104 RRGAWSRCVQTIGVLDAAAALSVEHTRQRVQFGRPLSAFQSVQQSLAGMA MMAR_3512|M.marinum_M FKSALVRAIQVCAALDQILHLSVEHVSSRVQFGRPLAKFQAVQNLIADIA MUL_2756|M.ulcerans_Agy99 FKSALVRAIQVCAALDQILHLSVEHVSSRVQFGRPLAKFHAVQNLIADIA MSMEG_2878|M.smegmatis_MC2_155 LKAALVRAVQVCAAMDTILELAVEHSSSRIQFGRPLAKFQAIQHMISDIA Mflv_5167|M.gilvum_PYR-GCK LRGALVRGLQVCAALDRIVALSIAHTTDRTQFGRPLAKFQSVQNLVSDSA Mvan_2875|M.vanbaalenii_PYR-1 LKCALVRAIQVCSALDTILVLAVEHTTSRVQFGRSLSKFQAVQHMIADMA MLBr_00737|M.leprae_Br4923 DHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMA * . : :: : .* ***..:. ::::: :: Mb3593|M.bovis_AF2122/97 IAIELACP---LVYGAAVSLE------PRDVSAAKAAASEAALLAARSAL Rv3563|M.tuberculosis_H37Rv IAIELACP---LVYGAAVSLE------PRDVSAAKAAASEAALLAARWAL MAB_0594c|M.abscessus_ATCC_199 IALELARP---LVYGAALSLADQSPTAARDASAAKVAAAKAAYLAARSAL TH_3909|M.thermoresistible__bu GEIERARAAASLAVAAAADNGFESARTEFAVTAARAAVGRAVTPVTTIAH MAV_2553|M.avium_104 GEIERARAAAELAVAAASEHGFNSPHTDYAVTVAKVAVGRAVGPVTSVAH MMAR_3512|M.marinum_M AETALARAATEAALTKAVTSQWSAQNLDFLVAVARSCVGHAVSVVVRNAH MUL_2756|M.ulcerans_Agy99 AETALARAATEAALTKAVTSQWSAQNLDFLVAVARSCVGHVVSVVVRNAH MSMEG_2878|M.smegmatis_MC2_155 AEATLARTATEAALTAAVDTTWSAPHLEFLVAVARSCCGHAASVVVRNAH Mflv_5167|M.gilvum_PYR-GCK AEAALARAATEAALTEAVRTGWSGTNLEFLVAVARSCTGHATSVVVRNAH Mvan_2875|M.vanbaalenii_PYR-1 GEAALASASTEAALAAAIASGWAADNLGFLVAVARSCTGHAASVVVRNAH MLBr_00737|M.leprae_Br4923 MKVEAARL---IVYAAAARAERGEPDLGFISAASKCFASDIAMEVTTDAV * . * :.:: . . .. * Mb3593|M.bovis_AF2122/97 QTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL-------- Rv3563|M.tuberculosis_H37Rv QTHGAIGFTCEHDLSLWLLRVQALHSAWGTPQEHRRRVLEAL-------- MAB_0594c|M.abscessus_ATCC_199 QTHGAIGFTAEYDLSLWILKVRALTSAWGTSEWHRARVLEAL-------- TH_3909|M.thermoresistible__bu QLHGAIGVTTEHPLWSATMRARSWAGEFGTTNGYARRLGRMALQAHDP-- MAV_2553|M.avium_104 QLHGAIGVTSEHPLWLFTLRAQSWTADYGTTANYARRLGRLVLAAEDP-- MMAR_3512|M.marinum_M QVHGAIGTTEEHRLHEFTRAALAWRSEFGSVHYWDEQVTKAALHAGGSGL MUL_2756|M.ulcerans_Agy99 QVHGAIGTTEEHRLHEFTRAALAWRSEFGSVHYWDEQVTKAALHAGGSGL MSMEG_2878|M.smegmatis_MC2_155 QVFGAIGTTAEHRLHEYTRAALAWRGEFGSVRSWDERVTTAALQAGGAGL Mflv_5167|M.gilvum_PYR-GCK QVHGAIGTTREHRLHEFTQPALAWRSEFGSVHYWDELLTTAALAAGRDGL Mvan_2875|M.vanbaalenii_PYR-1 QALGAIGTTIEHRLHEYTRAALTWRSEYGSVQHWDEVVTRNALDAGTRGL MLBr_00737|M.leprae_Br4923 QLFGGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR------ * *. * * :. : . *: : Mb3593|M.bovis_AF2122/97 -------------------- Rv3563|M.tuberculosis_H37Rv -------------------- MAB_0594c|M.abscessus_ATCC_199 -------------------- TH_3909|M.thermoresistible__bu WDLVIGNI------------ MAV_2553|M.avium_104 WSLVTGDPPEVKTMVNKENW MMAR_3512|M.marinum_M WGLITG-------------- MUL_2756|M.ulcerans_Agy99 WGLITG-------------- MSMEG_2878|M.smegmatis_MC2_155 WELITS-------------- Mflv_5167|M.gilvum_PYR-GCK WPLITA-------------- Mvan_2875|M.vanbaalenii_PYR-1 WGLITG-------------- MLBr_00737|M.leprae_Br4923 --------------------