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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3126 | - | - | 100% (328) | putative amino acid permease-associated region |
| M. thermoresistible (build 8) | TH_0471 | - | 1e-15 | 25.84% (298) | POSSIBLE CATIONIC AMINO ACID TRANSPORT INTEGRAL MEMBRANE |
| M. thermoresistible (build 8) | TH_4382 | - | 7e-13 | 28.57% (259) | PUTATIVE amino acid permease-associated region |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2022c | - | 3e-92 | 69.80% (255) | integral membrane protein |
| M. gilvum PYR-GCK | Mflv_0187 | - | 1e-93 | 69.17% (253) | amino acid permease-associated region |
| M. tuberculosis H37Rv | Rv1999c | - | 3e-92 | 69.80% (255) | integral membrane protein |
| M. leprae Br4923 | MLBr_01974 | - | 4e-12 | 25.19% (270) | putative permease |
| M. abscessus ATCC 19977 | MAB_2598 | - | 4e-92 | 69.80% (255) | hypothetical protein MAB_2598 |
| M. marinum M | MMAR_2407 | rocE_1 | 4e-20 | 30.50% (259) | cationic amino acid transport integral membrane protein, |
| M. avium 104 | MAV_2087 | - | 3e-19 | 29.12% (261) | amino acid transporter |
| M. smegmatis MC2 155 | MSMEG_0812 | - | 1e-95 | 69.58% (263) | amino acid transporter |
| M. ulcerans Agy99 | MUL_1244 | rocE | 7e-19 | 28.85% (260) | cationic amino acid transport integral membrane protein RocE |
| M. vanbaalenii PYR-1 | Mvan_0718 | - | 6e-93 | 68.34% (259) | amino acid permease-associated region |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0187|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0718|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_0812|M.smegmatis_MC2_155 --------------------------------------------------
Mb2022c|M.bovis_AF2122/97 --------------------------------------------------
Rv1999c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_2598|M.abscessus_ATCC_1997 --------------------------------------------------
TH_3126|M.thermoresistible__bu --------------------------------------------------
MAV_2087|M.avium_104 --------------------------------------------------
MUL_1244|M.ulcerans_Agy99 --------------------------------------------------
MMAR_2407|M.marinum_M --------------------------------------------------
MLBr_01974|M.leprae_Br4923 MFLSADVSCIEIVDINCSELRNDRRIPPQLALFCTNAANKAESAVTSHGQ
Mflv_0187|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0718|M.vanbaalenii_PYR-1 --------------------------------------------MSSPGG
MSMEG_0812|M.smegmatis_MC2_155 --------------------------------------------MSTPGG
Mb2022c|M.bovis_AF2122/97 --------------------------------------------MRRPLD
Rv1999c|M.tuberculosis_H37Rv --------------------------------------------MRRPLD
MAB_2598|M.abscessus_ATCC_1997 --------------------------------------------MSSQQ-
TH_3126|M.thermoresistible__bu --------------------------------------------------
MAV_2087|M.avium_104 -------------------------------------------------M
MUL_1244|M.ulcerans_Agy99 ---------------------------MPATSIRLREQMLRRRPAGGAPV
MMAR_2407|M.marinum_M ---------------------------MAAPTIGLIQQMLRRRPVIGAPV
MLBr_01974|M.leprae_Br4923 LPIMANRRWAPHTRRQSGRATSTCSSLMRFSASESRAHSRFECYTLVRWS
Mflv_0187|M.gilvum_PYR-GCK -------MRRRLGTFDTVTLGLGSMIGAGIFVALAPAAAAAGTGLLVGLA
Mvan_0718|M.vanbaalenii_PYR-1 S-----TLDRRLGVFDTVTIGLGSMIGAGIFVALAPAAAAAGSGLLIGLA
MSMEG_0812|M.smegmatis_MC2_155 -------LQRRLGTFDAVTIGLGSMIGAGIFAAIGPAAAAAGSGLLIGLA
Mb2022c|M.bovis_AF2122/97 PRDIPDELRRRLGLLDAVVIGLGSMIGAGIFAALAPAAYAAGSGLLLGLA
Rv1999c|M.tuberculosis_H37Rv PRDIPDELRRRLGLLDAVVIGLGSMIGAGIFAALAPAAYAAGSGLLLGLA
MAB_2598|M.abscessus_ATCC_1997 ----PGALRRELGTFDAVMIGLGSMIGAGIFAALAPAARSAGSALLIGLC
TH_3126|M.thermoresistible__bu -------LPRRLGTLDAVTIGLGAMIGAGIFVALGPAAAAAGPWLLAGLG
MAV_2087|M.avium_104 APGTADHLRRGIGTFQLTMFGVGSTIGTGIFFVMSQAVPEAGPAVIVSFL
MUL_1244|M.ulcerans_Agy99 AEGAAGSLKRSFGTFELTMFGVGSTVGTGIFFVLAEAVPEAGPAVIVSFI
MMAR_2407|M.marinum_M AHGASDQLKRSIGTFQLTLFGVGATVGTGIFFVLSEAVPEAGPGVVASFV
MLBr_01974|M.leprae_Br4923 IRGQGGRAISKLGFWSVVMLGINSIIGAGIFMTPGEVIKIAGPFAPIAYT
:* . . :*:.: :*:*** . . . **. .
Mflv_0187|M.gilvum_PYR-GCK VAALIAVCNAMSSARLAARYPESGGTYVYGRERLGPFWGHTAGWSFIVGK
Mvan_0718|M.vanbaalenii_PYR-1 VAAVVAVCNAMSSARLAARYPQSGGTYVYGRERLGPFWGHAAGWSFIVGK
MSMEG_0812|M.smegmatis_MC2_155 LAAVVAYCNATSSARLAAIYPQSGGTYVYGRERLGEFWGYLAGWSFAVGK
Mb2022c|M.bovis_AF2122/97 VAAVVAYCNAISSARLAARYPASGGTYVYGRMRLGDFWGYLAGWGFVVGK
Rv1999c|M.tuberculosis_H37Rv VAAVVAYCNAISSARLAARYPASGGTYVYGRMRLGDFWGYLAGWGFVVGK
MAB_2598|M.abscessus_ATCC_1997 VAAVIAYCNATSSARLAAVYPASGGTYVYGRERLGDFWGYLAGWGFVVGK
TH_3126|M.thermoresistible__bu IAAAVAYCNATASARLAARYPQSGGTYVYGRERLGAFWGYTAGFSFVVGK
MAV_2087|M.avium_104 LAGVAAGLAAVCYAELASAVPVSGSSYSYAYTTLGEVVAMGVAACLLLEY
MUL_1244|M.ulcerans_Agy99 IAGVAAGLAAICCAELASAVPVSGSSYSYAYATLGEAVAMGVASCLLLEY
MMAR_2407|M.marinum_M IAGIAAGLAAVCYAELASAVPVSGSTYSYAYTTLGELVAMGVAACLLLEY
MLBr_01974|M.leprae_Br4923 LAGIFAAVLAIVFATAAKYVKTNGSSYAYTTAAFGHRIGIYVGVTHAITA
:*. * * * * .*.:* * :* . .. :
Mflv_0187|M.gilvum_PYR-GCK TASCAAMALTVG------YYVWPAYANAVAVGSVVALTAVSY--------
Mvan_0718|M.vanbaalenii_PYR-1 TASCAAMALTVG------FYAWPEYANAVAVASVVALTAVGY--------
MSMEG_0812|M.smegmatis_MC2_155 TASCAAMALTVG------SYAWPEHANAVAVGAVVALTAVNY--------
Mb2022c|M.bovis_AF2122/97 TASCAAMALTVG------FYVWPAQAHAVAVAVVVALTAVNY--------
Rv1999c|M.tuberculosis_H37Rv TASCAAMALTVG------FYVWPAQAHAVAVAVVVALTAVNY--------
MAB_2598|M.abscessus_ATCC_1997 TASCAAMALTIG------FYAWPGHAHAVAVASVVALTAINY--------
TH_3126|M.thermoresistible__bu TASCAAMALTIG------FYLWPGHAHAIAVAAVVALTALTY--------
MAV_2087|M.avium_104 GVATAAVSVNWS------GYLNKLLSNVVGFQLPHALSAAPW-DAQPG--
MUL_1244|M.ulcerans_Agy99 GVATAAVAVGLS------GYVNKLLHNVFGFQLPQALSEAPW-DERPGEA
MMAR_2407|M.marinum_M GVSTAAVAVGWS------QYVNKLLDNFFGHHLPQALSAAPWGDASPG--
MLBr_01974|M.leprae_Br4923 SIAWGVLASSFVSTLLRVAFPEKIWADNDELISVKTLTFLVFIAVLLAIN
: ..:: : . :*: :
Mflv_0187|M.gilvum_PYR-GCK --------------------AGVQRSATLTRVIVALVLGVLAMVVVVVFG
Mvan_0718|M.vanbaalenii_PYR-1 --------------------AGVQRSAALTRIIVALVLAVLAMVVVVLLG
MSMEG_0812|M.smegmatis_MC2_155 --------------------VGVQKSAVLTRVIVAVVLAILATVVVLLLG
Mb2022c|M.bovis_AF2122/97 --------------------AGIQKSAWLTRSIVAVVLVVLTAVVVAAYG
Rv1999c|M.tuberculosis_H37Rv --------------------AGIQKSAWLTRSIVAVVLVVLTAVVVAAYG
MAB_2598|M.abscessus_ATCC_1997 --------------------VGVQKSAWLTRVIVAIVLSVLAAIVATAAG
TH_3126|M.thermoresistible__bu --------------------LGIEKSALLTRLVVAGVLGVLTAVVVLVLG
MAV_2087|M.avium_104 --YVNLPAVMLIGMCALLLIRGASESAKVNAIMVMVKLGVLVVFGILAFT
MUL_1244|M.ulcerans_Agy99 AGYLNLPAIILIGLCALLLIRGVSESAKVNAIMVLIKLGVLGMFVILALT
MMAR_2407|M.marinum_M --IINLPAVVLVGLCAVLLIRGASESAKVNTIMVLIKLSVLVMFAVIALT
MLBr_01974|M.leprae_Br4923 ----------IFGNLVIRWANGISALGKIFALSVFIAGGLWTIITQHVNN
* . . : * : .
Mflv_0187|M.gilvum_PYR-GCK SGDVDASR---------LALGPDVDAYGVLQAAGLLFFAFAGYARIATLG
Mvan_0718|M.vanbaalenii_PYR-1 FGGADTSR---------LALGDDVTVYGVLQAAGLLFFAFAGYARIATLG
MSMEG_0812|M.smegmatis_MC2_155 SGDADPAR---------LSLGDDVSAVGVLQAAGLLFFAFAGYARIATLG
Mb2022c|M.bovis_AF2122/97 SGAADPAR---------LDIGVDAHVWGMLQAAGLLFFAFAGYARIATLG
Rv1999c|M.tuberculosis_H37Rv SGAADPAR---------LDIGVDAHVWGMLQAAGLLFFAFAGYARIATLG
MAB_2598|M.abscessus_ATCC_1997 SGSVDIAA---------LDL-TGTSWRGVLQAAGLLFFAFAGYARIATLG
TH_3126|M.thermoresistible__bu FGAPAGRV---------AGGGTDIGAGAVLQSAALLFFAFAGYARIATLG
MAV_2087|M.avium_104 --AFDMHH---------LDDFAPFGVAGVGTAAGTIFFSYIGLDAVSTAG
MUL_1244|M.ulcerans_Agy99 --AYDTNH---------LKDFAPFGVAGVGAAAGTIFFSFIGLDAVSTAG
MMAR_2407|M.marinum_M --AFDADR---------FAEFAPFGVAGIGAAAGTIFFSYIGLDAVSTAG
MLBr_01974|M.leprae_Br4923 YVTSRSAYQPTTYSLLGVTEIGKSTAASMTLATIVALYAFTGFESIANAA
.: :: :::: * ::. .
Mflv_0187|M.gilvum_PYR-GCK EEVRDPARTIPRAIGLALVIALLTYAVVAVAVLAQLGSTGLATADAPLAD
Mvan_0718|M.vanbaalenii_PYR-1 EEVRDPARTIPRAVALALVIALMVYAVVAVAVVSELGVAGLASATAPLSD
MSMEG_0812|M.smegmatis_MC2_155 EEVRDPARIIPRAIRIALGLTLVVYAVVAGAVLAVLGGTDLAGATAPLAD
Mb2022c|M.bovis_AF2122/97 EEVRDPARTIPRAIPLALGITLAVYALVAVAVIAVLGPQRLARAAAPLSE
Rv1999c|M.tuberculosis_H37Rv EEVRDPARTIPRAIPLALGITLAVYALVAVAVIAVLGPQRLARAAAPLSE
MAB_2598|M.abscessus_ATCC_1997 EEVRDPARTIPRAIPIALGIALVVYVVVALAVLITLGPSRLASSAAPLLD
TH_3126|M.thermoresistible__bu EEVRDPARTIRRAIPLALGITLTVYGAVTAAVLVALGSAGLARSPAPVAD
MAV_2087|M.avium_104 DEVTNPQKTMPRALIAALLTVTGVYVFVALAALGTQPWQDFGGQQEAGLA
MUL_1244|M.ulcerans_Agy99 EEVRNPQQSVPRALIAALFVVTGVYVLVAFAALGTQPWQMFAGQEEAGLA
MMAR_2407|M.marinum_M DEVKNPQKTMPLAIMAALVTVTTVYVVVTVAALGAQPWRDFEGQQ-AGLA
MLBr_01974|M.leprae_Br4923 EEMNTPDRTLPKAIPLTILTVGVIYILALVVAMLLGSDKIVATNHTVKLA
:*: * : : *: :: . * . ..: .
Mflv_0187|M.gilvum_PYR-GCK AVR--AAGLPALAPVVAVGAALAALGALLALLLGVSRTTLAMARDRHLPH
Mvan_0718|M.vanbaalenii_PYR-1 AVR--AAGFPGLTPVVNVGAAIAALGALLALLLGVSRTTLAMARDRYLPA
MSMEG_0812|M.smegmatis_MC2_155 AVA--AVGAGQWQPLVRAGAAIAALGSLLALILGVSRTTLAMARDHHLPS
Mb2022c|M.bovis_AF2122/97 AMR--VAGVNWLIPVVQIGAAVAALGSLLALILGVSRTTLAMARDRHLPR
Rv1999c|M.tuberculosis_H37Rv AMR--VAGVNWLIPVVQIGAAVAALGSLLALILGVSRTTLAMARDRHLPR
MAB_2598|M.abscessus_ATCC_1997 AVT--AAGAGWMEPVVRIGAVVAATGSLLALILGVSRTTFAMARDRHLPH
TH_3126|M.thermoresistible__bu AVT--AAXX---------HGRQQPFGELPG----------AEEVDRGHPQ
MAV_2087|M.avium_104 TILDHVTHGSWASTILAAGAVISIFSVTLVTMYGITRILFAMGRDGLLPP
MUL_1244|M.ulcerans_Agy99 TILDNVTHSAWASTVLAMGAVISIFTVTLVTMYGQTRILFAMGRDGLLPA
MMAR_2407|M.marinum_M TVLDRVVSGHYWGSVLAAGAVISIFSVTLVVLYGQTRILFAMGRDGLLPP
MLBr_01974|M.leprae_Br4923 AAVG----NNTFRTIIVVGALVSMFGINVAASFGAPRLWTALSDGRILPT
: . * . *
Mflv_0187|M.gilvum_PYR-GCK PLAHVHPGHGTPQRAEVAVGVVVAVVAAVVDVRSA--IGFSSFGVLLYYA
Mvan_0718|M.vanbaalenii_PYR-1 GLAAVHPKHGTPHHAEVAVGLVVAVVAAFVDLRGA--IGFSSFGVLLYYA
MSMEG_0812|M.smegmatis_MC2_155 ALGAVHPRFGVPHRAEVTVGVVVAVLAAVADLRGA--IGFSSFAVLLYYA
Mb2022c|M.bovis_AF2122/97 WLAAVHPRFKVPFRAELVVGAVVAALAATADIRGA--IGFSSFGVLVYYA
Rv1999c|M.tuberculosis_H37Rv WLAAVHPRFKVPFRAELVVGAVVAALAATADIRGA--IGFSSFGVLVYYA
MAB_2598|M.abscessus_ATCC_1997 TLATVHPKYGVPYRAEILVGLVVSVLAATADLRGA--IGFSSFAVLVYYA
TH_3126|M.thermoresistible__bu RIPDAR---RHPGHVEHRS------SPTTCAPR-----------------
MAV_2087|M.avium_104 RFARVNPRTMTPVNNTVIVAVAAATLAAFIPLQNL--ADMVSIGTLTAFV
MUL_1244|M.ulcerans_Agy99 RFAAVHPRFQTPVSNTVVVAIAAAVLAALVPLNRL--ADMVSIGTLTAFI
MMAR_2407|M.marinum_M VFAKVRPPNMTPVYNTIIVAVVICILAGFVPLSYL--ADVVSIGTLVAFI
MLBr_01974|M.leprae_Br4923 RLSSKN-RFGVPIVAFGITAFLTLAFPLSLRFDSLNLTGLAVIARFIQFI
: . * .
Mflv_0187|M.gilvum_PYR-GCK VANASAWTLTATPR--AR----------LVPAVGLIGCVVLAFTLPPVSV
Mvan_0718|M.vanbaalenii_PYR-1 IANASAWTLG------AR----------LIPAIGLVGCLVLAFTLPLTSV
MSMEG_0812|M.smegmatis_MC2_155 IANASAATLG------GR----------LVPAVGLVGCLVLAFTLPLSSV
Mb2022c|M.bovis_AF2122/97 IANASALTLGLDEGRPRR----------LIPLVGLIGCVVLAFALPLSSV
Rv1999c|M.tuberculosis_H37Rv IANASALTLGLDEGRPRR----------LIPLVGLIGCVVLAFALPLSSV
MAB_2598|M.abscessus_ATCC_1997 VANASAWTLTPSQGRPAR----------IIPAVGLVGCVIVSLALPLSSV
TH_3126|M.thermoresistible__bu ------------------------------PLTWRTTWAPMPDPQPVTTT
MAV_2087|M.avium_104 VVSVGVIVLRVREPDLPRGFRV--PGYPVTPVLSIMACGYILASLHWYTW
MUL_1244|M.ulcerans_Agy99 VVSVGVIILRVREPALPRGFWV--PGYPVTPILSILACGYLLYSLHWYTW
MMAR_2407|M.marinum_M VVSVGVVILRVREPDLPRGFKV--PLYPVTPVLSVLACGYILFSLPWYTW
MLBr_01974|M.leprae_Br4923 IVPIALFALARSRTTNSVYVKRNVFTDKVLPITAVVVSAGLMVSFDYRSI
* : . :
Mflv_0187|M.gilvum_PYR-GCK LA---GAAVVLVGMLAYTTGGALRRGV-----------------------
Mvan_0718|M.vanbaalenii_PYR-1 LA---GAAVVLVGMIAYTIGGTR---------------------------
MSMEG_0812|M.smegmatis_MC2_155 LA---GLAVVAAGAVVYGVRRIS---------------------------
Mb2022c|M.bovis_AF2122/97 AA---GAAVLGVGVAAYGVRRIITRRARQTDSGDTQRSGHPSAT------
Rv1999c|M.tuberculosis_H37Rv AA---GAAVLGVGVAAYGVRRIITRRARQTDSGDTQRSGHPSAT------
MAB_2598|M.abscessus_ATCC_1997 AA---GTGVLAVGVIVYALRRVSGPGRRE---------------------
TH_3126|M.thermoresistible__bu RR---PS-------------------------------------------
MAV_2087|M.avium_104 IA---FSGWVLLALIFYFVWGRHHSALN---DAAVD--PSGQER------
MUL_1244|M.ulcerans_Agy99 IA---FGGWVGIALIFYLFWGRHHSRLN---APALHDNPTGEER------
MMAR_2407|M.marinum_M LA---FSIWVSVVLVFYFVWGRHHSALNDGGDGVIGAMPADAGDSDVLAQ
MLBr_01974|M.leprae_Br4923 FLTRGGPNYFSISLIAITFIGIPAVAYLHYYRTSGIK-------------
Mflv_0187|M.gilvum_PYR-GCK ---
Mvan_0718|M.vanbaalenii_PYR-1 ---
MSMEG_0812|M.smegmatis_MC2_155 ---
Mb2022c|M.bovis_AF2122/97 ---
Rv1999c|M.tuberculosis_H37Rv ---
MAB_2598|M.abscessus_ATCC_1997 ---
TH_3126|M.thermoresistible__bu ---
MAV_2087|M.avium_104 ---
MUL_1244|M.ulcerans_Agy99 ---
MMAR_2407|M.marinum_M RDH
MLBr_01974|M.leprae_Br4923 ---