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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2975 | - | - | 100% (235) | putative transcription regulator AmtR |
| M. thermoresistible (build 8) | TH_2855 | - | 1e-11 | 43.02% (86) | PUTATIVE - |
| M. thermoresistible (build 8) | TH_3462 | - | 8e-10 | 32.45% (151) | PUTATIVE putative transcriptional regulator, TetR family |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3185c | - | 4e-12 | 34.51% (142) | TetR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_0973 | - | 9e-11 | 38.30% (94) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv3160c | - | 4e-12 | 34.51% (142) | TetR family transcriptional regulator |
| M. leprae Br4923 | MLBr_01733 | - | 0.0001 | 29.03% (93) | putative TetR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_4089c | - | 3e-40 | 44.24% (217) | TetR family transcriptional regulator |
| M. marinum M | MMAR_3548 | - | 2e-08 | 30.23% (129) | hypothetical protein MMAR_3548 |
| M. avium 104 | MAV_0959 | - | 3e-10 | 30.39% (181) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_4300 | - | 7e-48 | 52.11% (213) | transcription regulator AmtR |
| M. ulcerans Agy99 | MUL_2781 | - | 2e-08 | 30.23% (129) | hypothetical protein MUL_2781 |
| M. vanbaalenii PYR-1 | Mvan_1492 | - | 2e-09 | 30.06% (173) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_4089c|M.abscessus_ATCC_199 --------------------------------------------------
MSMEG_4300|M.smegmatis_MC2_155 --------------------------------------------------
TH_2975|M.thermoresistible__bu --------------------------------------------------
Mb3185c|M.bovis_AF2122/97 --------------------------------------------------
Rv3160c|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_0973|M.gilvum_PYR-GCK --------------------------------------------------
MAV_0959|M.avium_104 --------------------------------------------------
MMAR_3548|M.marinum_M MIDKAPFRGARTVLHSTTTASMQPTTTHPAQARRLRSSGELLGARDVSAH
MUL_2781|M.ulcerans_Agy99 ---------------------MQPTTTHPAQARRLRSSGKLLGARDVSAH
Mvan_1492|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_01733|M.leprae_Br4923 -----------------------MTRRSIHTRKPLKWSGCAGQHVRSGKV
MAB_4089c|M.abscessus_ATCC_199 -----------MS-----GRPRRISPIREGNSTRDEILDASAELFTTDGF
MSMEG_4300|M.smegmatis_MC2_155 -----------MTTTSGRGRPRLEQPRRPGQTAREEILDAAAELFTTHGY
TH_2975|M.thermoresistible__bu ----VTAGGHPAAAPVTCGRPRSQERRRPGATARDEVLDAAAELFTTLGV
Mb3185c|M.bovis_AF2122/97 -------------------MPRQAGRWSPTALR---ILGAAAELIALRGY
Rv3160c|M.tuberculosis_H37Rv -------------------MPRQAGRWSPTALR---ILGAAAELIALRGY
Mflv_0973|M.gilvum_PYR-GCK ------------MSGDSTRAG---------GPTRRRLIDVAIELFKRYSV
MAV_0959|M.avium_104 ------------MGTARQAVSDEQFWLVEHSPARTRVLDAALDLFAANGV
MMAR_3548|M.marinum_M NKPRNVDNTRGGNAPANERRRRPGRPRGNSSDTRQRILASARELFASNGI
MUL_2781|M.ulcerans_Agy99 NKPRNVDNTRGGNAPANERRRRPGRLRGNSSDTRQRILASARELFASNGI
Mvan_1492|M.vanbaalenii_PYR-1 ------------------MTPPDRPVRADAARNRALLLAAAEEEFAERGP
MLBr_01733|M.leprae_Br4923 FDVGRISLSYPSMKPGVKIDARSERWREHRKKVRGEIVDAAFRALDRLG-
:: : : .
MAB_4089c|M.abscessus_ATCC_199 AATTTRRIAESVGIQQASLYYHFKTKDDILDALLAMTIDQPLHYAALIAD
MSMEG_4300|M.smegmatis_MC2_155 GSTSTRRIADEVGVRQASLYHHFATKDDILDALLAGTVDEPLELAHGLLG
TH_2975|M.thermoresistible__bu AATSTRQIAESVGVRQASLYHHFRTKDEILATLLDATVAPSVTAARRLRG
Mb3185c|M.bovis_AF2122/97 SSTSTRDIAAAVGVEQPAIYKHFSAKRDILAALVRLAVEWPLELFGHITA
Rv3160c|M.tuberculosis_H37Rv SSTSTRDIAAAVGVEQPAIYKHFSAKRDILAALVRLAVEWPLELFGHITA
Mflv_0973|M.gilvum_PYR-GCK AGTSLQMISDELGLTKSAIYHHFRTRDELLTAVMEPLIAEVAEIVDAAEE
MAV_0959|M.avium_104 SGTSLQMIADAVGITKAAVYHQFRTKEQIVIAVTERELGRLVPALEEAEA
MMAR_3548|M.marinum_M DRTSIRAVAAAADVDAALVHHYFGTKQQLFAAAIHLPIDPKLVLKRMQNT
MUL_2781|M.ulcerans_Agy99 DRTSIRAVAAAADVDAALVHHYFGTKQQLFAAAIHLPIDPKLVLKRMQNT
Mvan_1492|M.vanbaalenii_PYR-1 S-ASVADIARRAGVAKGTVFRHFPTKEDLIAAIVSEHIAVLAAAARRLAD
MLBr_01733|M.leprae_Br4923 PEVSVREIAEEAGTAKPKIYRHFTDKSDLFEAIGIRLRDMLWAAIFPAID
.: :: . :. * : ::. :
MAB_4089c|M.abscessus_ATCC_199 RPEAPVVRLYALALGDAAQLAASRWNLGALYLLPDLRAERFSAFRRKRDQ
MSMEG_4300|M.smegmatis_MC2_155 ESGPAAPRLHALVIYDASQLCAGRWNLGALYLLPELRTDRFAPFRRRRAE
TH_2975|M.thermoresistible__bu RPEPPAVLLHALVWLDARLLWDSPHNLGILYLLPEVRDRRFGGFHRRRSE
Mb3185c|M.bovis_AF2122/97 MPVPAVVKLHRWLTESLDHLHASPYVLVSILITPDLHQESFVAERELVAE
Rv3160c|M.tuberculosis_H37Rv MPVPAVVKLHRWLTESLDHLHASPYVLVSILITPDLHQESFVAERELVAE
Mflv_0973|M.gilvum_PYR-GCK QRTPHARADHMLVG--YASIAARHRTLIPLLSGDPGVVALLRTRSEWGDL
MAV_0959|M.avium_104 HDDGPQARDALLVR--VIEMAVRDRRLVRTLQFDPVVVRLLAEHEPFQRF
MMAR_3548|M.marinum_M PTAELGFALPSMLLPMWDSELGTGLIASLRSLFGGGDVDLARSF--LQEV
MUL_2781|M.ulcerans_Agy99 PTAELGFALPSMLLPMWDSELGTGLIASLRSLFGGGDVDLARSF--LQEV
Mvan_1492|M.vanbaalenii_PYR-1 SPDP-GAALLEFLTIAADQRQRHDLTFLQSASDGDPRVT------EVRDA
MLBr_01733|M.leprae_Br4923 LATDSAREIIRRSVDEYVSLVDKHPNVLRVFIQGRFSAQSEATVRTLDEG
MAB_4089c|M.abscessus_ATCC_199 LRTHYQELAAAACRASMLRAGV------ERLPFRLVESVIM-LRADGDSI
MSMEG_4300|M.smegmatis_MC2_155 LRSAYRSLAAAVIAECGGPPEA------DDLPFRLVESVIN-SRSDDAVV
TH_2975|M.thermoresistible__bu LRAAYRDLAERVAAAGATPSSVPDVVIDPDVVFRLVETLPN-LRMDG-LG
Mb3185c|M.bovis_AF2122/97 MERALVGLIETGQGEGDVRAMH------PLSAARLVQALFDALALPEFAV
Rv3160c|M.tuberculosis_H37Rv MERALVGLIETGQGEGDVRAMH------PLSAARLVQALFDALALPEFAV
Mflv_0973|M.gilvum_PYR-GCK VRRQLALFSEVEPGLGG------------QVKAALAMSGIASAAGVDYGG
MAV_0959|M.avium_104 MDRLYRVLLS-DAGLDG------------RIEAAMFSGALSTAVMHPLVV
MMAR_3548|M.marinum_M VTAEMASLVDNPAGTGM-------------IRAQLVASQLLGVVMARYIL
MUL_2781|M.ulcerans_Agy99 VTAEMASLVDNPAGTGM-------------IRAQLVASQLLGVVMARYIL
Mvan_1492|M.vanbaalenii_PYR-1 LHANLETLVDRARTSGAIR--------ADITEADVFLMMCAPIHIVENLP
MLBr_01733|M.leprae_Br4923 REITLTMAEMFNNELREMELNR------AASELAAFAAFGSVASATEWWL
MAB_4089c|M.abscessus_ATCC_199 APEA--------------LADATLRVVGVTGDAGEIEGAARVLLGQLGWP
MSMEG_4300|M.smegmatis_MC2_155 PPEQP-----------WVIGEGALRVLGFDGDFAELAAATASRLGVR--P
TH_2975|M.thermoresistible__bu EPDQP-----------RRTADLAVHVLGWRGDWPRLRSESATVAAAVG--
Mb3185c|M.bovis_AF2122/97 SPDE--------------IVEFAMTALLSDPDRLAEIRAAADALEIQTAP
Rv3160c|M.tuberculosis_H37Rv SPDE--------------IVEFAMTALLSDPDRLAEIRAAADALEIQTAP
Mflv_0973|M.gilvum_PYR-GCK DVDD---------------DTLRDQLIAAGRRALGLRNSRTGAVTARR--
MAV_0959|M.avium_104 DIDD---------------ETLLDRVTDLSRRLLGLPRKPVE--------
MMAR_3548|M.marinum_M QIEP--------------FASMPAEDIAR-AIAPNLQRYLTGEI------
MUL_2781|M.ulcerans_Agy99 QIGP--------------FASMPAEDIAR-AIAPNLQRYLTGEI------
Mvan_1492|M.vanbaalenii_PYR-1 APAPL-----------LWQRYLAIIFDGLRPDGAHPLPQPAPAAP-----
MLBr_01733|M.leprae_Br4923 GPEPDSPRRMPREQFVAHLTIIMMAVIVGTAETLGISMNPDRPIHDAVPL
MAB_4089c|M.abscessus_ATCC_199 VAIPKR
MSMEG_4300|M.smegmatis_MC2_155 PGRAAR
TH_2975|M.thermoresistible__bu ---DCR
Mb3185c|M.bovis_AF2122/97 PDRGL-
Rv3160c|M.tuberculosis_H37Rv PDRGL-
Mflv_0973|M.gilvum_PYR-GCK ------
MAV_0959|M.avium_104 ------
MMAR_3548|M.marinum_M ------
MUL_2781|M.ulcerans_Agy99 ------
Mvan_1492|M.vanbaalenii_PYR-1 ------
MLBr_01733|M.leprae_Br4923 DRSAS-