For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4089c (-)

annotation: TetR family transcriptional regulator
coordinates: 4131913 - 4132572
length: 219

SGRPRRISPIREGNSTRDEILDASAELFTTDGFAATTTRRIAESVGIQQASLYYHFKTKDDILDALLAMT
IDQPLHYAALIADRPEAPVVRLYALALGDAAQLAASRWNLGALYLLPDLRAERFSAFRRKRDQLRTHYQE
LAAAACRASMLRAGVERLPFRLVESVIMLRADGDSIAPEALADATLRVVGVTGDAGEIEGAARVLLGQLG
WPVAIPKR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4089c--100% (219)TetR family transcriptional regulator
M. abscessus ATCC 19977MAB_0599-1e-0941.67% (72) TetR family transcriptional regulator
M. abscessus ATCC 19977MAB_4912c-2e-0929.86% (144) TetR family transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3185c-8e-1538.53% (109) TetR family transcriptional regulator
M. gilvum PYR-GCKMflv_1483-5e-0944.83% (58) TetR family transcriptional regulator
M. tuberculosis H37RvRv3160c-8e-1538.53% (109) TetR family transcriptional regulator
M. leprae Br4923MLBr_02568-5e-0523.49% (149) putative TetR-family transcriptional regulator
M. marinum MMMAR_5046-9e-1038.37% (86) TetR family transcriptional regulator
M. avium 104MAV_0603-4e-1140.24% (82) transcriptional regulator, TetR family protein
M. smegmatis MC2 155MSMEG_4300-1e-5352.63% (209) transcription regulator AmtR
M. thermoresistible (build 8)TH_2975-2e-4044.24% (217) PUTATIVE putative transcription regulator AmtR
M. ulcerans Agy99MUL_0990-1e-0738.75% (80) TetR family transcriptional regulator
M. vanbaalenii PYR-1Mvan_0170-1e-1137.63% (93) TetR family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


MAB_4089c|M.abscessus_ATCC_199      -------MS-----GRPRRISPIREGNSTRDEILDASAELFTTDGFA-AT
MSMEG_4300|M.smegmatis_MC2_155      -------MTTTSGRGRPRLEQPRRPGQTAREEILDAAAELFTTHGYG-ST
TH_2975|M.thermoresistible__bu      VTAGGHPAAAPVTCGRPRSQERRRPGATARDEVLDAAAELFTTLGVA-AT
Mb3185c|M.bovis_AF2122/97           ---------------MPRQAGRWSPTALR---ILGAAAELIALRGYS-ST
Rv3160c|M.tuberculosis_H37Rv        ---------------MPRQAGRWSPTALR---ILGAAAELIALRGYS-ST
MMAR_5046|M.marinum_M               ------------------MERMTGQANSRRGELLGLAAVMFAERGLR-AT
MAV_0603|M.avium_104                ---------------------MTGPANSRRDELLELAAAMFAERGLR-AT
Mflv_1483|M.gilvum_PYR-GCK          ---------------------MDRALPSRRDELLQLAATMFADRGLR-AT
Mvan_0170|M.vanbaalenii_PYR-1       ---------------MTTASSAQMPPQSARQRVLDVALALFTRHGYA-GT
MLBr_02568|M.leprae_Br4923          ----------------MAGGAKRIPRAVREQQMLDAAVQMFSVNGYH-KT
MUL_0990|M.ulcerans_Agy99           ---------------MRRARAPRGSGDLLRHEILDAATELLLQTRQARAV
                                                                    :*  :  ::        .

MAB_4089c|M.abscessus_ATCC_199      TTRRIAESVGIQQASLYYHFKTKDDILDALLAMTIDQPLHYAALIADRPE
MSMEG_4300|M.smegmatis_MC2_155      STRRIADEVGVRQASLYHHFATKDDILDALLAGTVDEPLELAHGLLGESG
TH_2975|M.thermoresistible__bu      STRQIAESVGVRQASLYHHFRTKDEILATLLDATVAPSVTAARRLRGRPE
Mb3185c|M.bovis_AF2122/97           STRDIAAAVGVEQPAIYKHFSAKRDILAALVRLAVEWPLELFGHITAMPV
Rv3160c|M.tuberculosis_H37Rv        STRDIAAAVGVEQPAIYKHFSAKRDILAALVRLAVEWPLELFGHITAMPV
MMAR_5046|M.marinum_M               TVRDIADGAGILSGSLYHHFASKEEMVDELLREFLDWLFARYLEIVDGEP
MAV_0603|M.avium_104                TVRDIADSAGILSGSLYHHFSSKEEMVDEVLRSFLDWLFARYREIIDSES
Mflv_1483|M.gilvum_PYR-GCK          TVRDIADSAGILSGSLYHHFKSKEQMVEEVLKDFLDWLFTRYDEIVAATT
Mvan_0170|M.vanbaalenii_PYR-1       SLQMIADEMGVTKGSLYYHFRAREDLLRALVGPLIEQLRAIVEHAEAQRS
MLBr_02568|M.leprae_Br4923          SMDAIAAEAQISKPMLYLYYGSKEDLFGACLNREMSRFIAMVRADIDFTQ
MUL_0990|M.ulcerans_Agy99           SIRSVAERVGVTSPSIYLHFQDKDALLDAVCARYLARLDEEMERAAMGHT
                                    :   :*    : .  :* ::  :  :.       :               

MAB_4089c|M.abscessus_ATCC_199      APVVRLYALALGDAAQLAASRWNLGALYLLPDLRA---ERFSAFRRKRDQ
MSMEG_4300|M.smegmatis_MC2_155      PAAPRLHALVIYDASQLCAGRWNLGALYLLPELRT---DRFAPFRRRRAE
TH_2975|M.thermoresistible__bu      PPAVLLHALVWLDARLLWDSPHNLGILYLLPEVRD---RRFGGFHRRRSE
Mb3185c|M.bovis_AF2122/97           PAVVKLHRWLTESLDHLHASPYVLVSILITPDLHQ---ESFVAERELVAE
Rv3160c|M.tuberculosis_H37Rv        PAVVKLHRWLTESLDHLHASPYVLVSILITPDLHQ---ESFVAERELVAE
MMAR_5046|M.marinum_M               NPLERLKGLFLASFEAIEHR-HAQVVIYQDEAQRLSSQPRFSYLEDRNKE
MAV_0603|M.avium_104                NPLERLKGLFMASFEAIEHR-HAQVVIYQDEAKRLLSQPRFSYIEDMNRQ
Mflv_1483|M.gilvum_PYR-GCK          DPLERVSGLFMVSFEAIEHR-HAQVVIYQDEAKRLNSLPQFGFLDDRNRQ
Mvan_0170|M.vanbaalenii_PYR-1       PSVRAEH--VLTGYARLAAANRALVAVTSGDPSVV----EVIHADPDWAD
MLBr_02568|M.leprae_Br4923          SPKDLLRNTIVSFLRYIDANRASWIVMYIQAMSLP-------AFAQTVRE
MUL_0990|M.ulcerans_Agy99           CVVEVLRAQGLAYVR-FALQTPELYRLATMGEWRSGSNVDSALDSSAFRH
                                                    :         :                      .

MAB_4089c|M.abscessus_ATCC_199      LRTHYQELAAAACRASMLRAGV------ERLPFRLVESVIM-LRADGDSI
MSMEG_4300|M.smegmatis_MC2_155      LRSAYRSLAAAVIAECGGPPEA------DDLPFRLVESVIN-SRSDDAVV
TH_2975|M.thermoresistible__bu      LRAAYRDLAERVAAAGATPSSVPDVVIDPDVVFRLVETLPN-LRMDG-LG
Mb3185c|M.bovis_AF2122/97           MERALVGLIETGQGEGDVRAMH------PLSAARLVQALFDALALPEFAV
Rv3160c|M.tuberculosis_H37Rv        MERALVGLIETGQGEGDVRAMH------PLSAARLVQALFDALALPEFAV
MMAR_5046|M.marinum_M               QRKMWVDVLNQGIEEGYFRPDLD-----VDLVYRFIR---DTTWVSVRWY
MAV_0603|M.avium_104                QRKMWLEVLNQGVDEGYFRPDLD-----VDLVYRFIR---DTTWVSVRWY
Mflv_1483|M.gilvum_PYR-GCK          QRRMWVEVLKQGIAEGSFRPDID-----VDLVYRFIR---DTTWVSVRWY
Mvan_0170|M.vanbaalenii_PYR-1       LIDRQIGLLAAVQPGLAGRVRAT-----------IVMAGIAATAAPGVVE
MLBr_02568|M.leprae_Br4923          ARDQITELVAGLMRVGTRSSRPD-------HEYEIMAGALVGAGEAMATR
MUL_0990|M.ulcerans_Agy99           MCASVQAMMDEGIYRADDPTTIA-------LELWTAAHGVAALLIAKPHL
                                           :                                          

MAB_4089c|M.abscessus_ATCC_199      APEA---LADATLRVVGVTGDAGEIEGAARVLLGQLGWPVAIPKR-----
MSMEG_4300|M.smegmatis_MC2_155      PPEQPWVIGEGALRVLGFDGDFAELAAATASRLGVR--PPGRAAR-----
TH_2975|M.thermoresistible__bu      EPDQPRRTADLAVHVLGWRGDWPRLRSESATVAAAVG-----DCR-----
Mb3185c|M.bovis_AF2122/97           SPDE---IVEFAMTALLSDPDRLAEIRAAADALEIQTAPPDRGL------
Rv3160c|M.tuberculosis_H37Rv        SPDE---IVEFAMTALLSDPDRLAEIRAAADALEIQTAPPDRGL------
MMAR_5046|M.marinum_M               KPGG-------ALTAQQVGQKYLAIVLGGIQKEGV---------------
MAV_0603|M.avium_104                QPGG-------PLTAEQVGQQYLAIVLGGITVDAKKD-------------
Mflv_1483|M.gilvum_PYR-GCK          QPGG-------PLTAEQVGRQYLAIVLGGITEGSK---------------
Mvan_0170|M.vanbaalenii_PYR-1       ADEA-------ELCRQLIDAGRRTLGLRAPRA------------------
MLBr_02568|M.leprae_Br4923          LTTG--DIAVDEAAELMINLFWHGLKGAPADRDFGPSIVAG---------
MUL_0990|M.ulcerans_Agy99           PFGDVAAFADRVLGAVLCGHMVAGLVGPQATSRDLMDWVVQHRPSEESRV