For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2587 | - | - | 100% (398) | acyl-CoA dehydrogenase domain protein |
| M. thermoresistible (build 8) | TH_3716 | - | e-158 | 69.27% (397) | PUTATIVE putative acyl-CoA dehydrogenase |
| M. thermoresistible (build 8) | TH_2739 | - | 2e-62 | 39.90% (396) | PUTATIVE putative acyl-CoA dehydrogenase, middle domain protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3534 | fadE26 | 9e-40 | 30.51% (413) | acyl-CoA dehydrogenase FADE26 |
| M. gilvum PYR-GCK | Mflv_4100 | - | 1e-162 | 72.59% (394) | acyl-CoA dehydrogenase domain-containing protein |
| M. tuberculosis H37Rv | Rv3504 | fadE26 | 9e-40 | 30.51% (413) | acyl-CoA dehydrogenase FADE26 |
| M. leprae Br4923 | MLBr_00737 | fadE25 | 3e-18 | 23.60% (411) | putative acyl-CoA dehydrogenase |
| M. abscessus ATCC 19977 | MAB_0615 | - | 2e-47 | 34.58% (402) | putative acyl-CoA dehydrogenase |
| M. marinum M | MMAR_4010 | - | 1e-154 | 67.77% (391) | acyl-CoA dehydrogenase |
| M. avium 104 | MAV_5127 | - | 1e-159 | 68.88% (392) | acyl-CoA dehydrogenase middle domain-containing protein |
| M. smegmatis MC2 155 | MSMEG_0578 | - | 1e-159 | 70.78% (397) | acyl-CoA dehydrogenase middle domain-containing protein |
| M. ulcerans Agy99 | MUL_3874 | - | 1e-153 | 67.77% (391) | acyl-CoA dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_2246 | - | 1e-159 | 69.52% (397) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3534|M.bovis_AF2122/97 -------------MRISYTPQQEELRRELRSYFATLMTPERREALSSVQG
Rv3504|M.tuberculosis_H37Rv -------------MRISYTPQQEELRRELRSYFATLMTPERREALSSVQG
MAB_0615|M.abscessus_ATCC_1997 -------------MLIDLTPEQAKLQNDLRHYFSNLVTAEETREMMIDR-
Mflv_4100|M.gilvum_PYR-GCK MG------VAVDFSEVELCDADKAFRDEVREFLAAVVTDDVIRRDLESG-
Mvan_2246|M.vanbaalenii_PYR-1 MHGQEVGAVTMDFSEVELSDDDRAFQAELRGFLARVVTDDVIERDRRTG-
MSMEG_0578|M.smegmatis_MC2_155 ----------MDFSRVELSDEDTRFRDELRAFLAEIVTDEVIRRDRETG-
TH_2587|M.thermoresistible__bu ----------MDFSTVELSPEDQRFRAELRDFLTRHVTAEVIRRDRETG-
MAV_5127|M.avium_104 ----------MDFSRVELSTQDAAFQESTRAFLAEHVTDEVRRRDRETG-
MMAR_4010|M.marinum_M ----------MDFSRVQISDADREFRETARSFLATHVTEEVRRHDRETG-
MUL_3874|M.ulcerans_Agy99 ----------MDFSRVQISDADREFRETARSFLATHVTEEVRRHDRETG-
MLBr_00737|M.leprae_Br4923 ---MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRAR-
.. . :: * :: .
Mb3534|M.bovis_AF2122/97 EYGVGNVYRETIAQMGRDGWLALGWPKEYGGQGRSAMDQLIFTDEAAIAG
Rv3504|M.tuberculosis_H37Rv EYGVGNVYRETIAQMGRDGWLALGWPKEYGGQGRSAMDQLIFTDEAAIAG
MAB_0615|M.abscessus_ATCC_1997 ---HGSSYEAVVRRMGQDGWLGVGWPKEYGGHGFGPLEQQIFMNEVMRAD
Mflv_4100|M.gilvum_PYR-GCK ----DNFDEQVHLALGSAGYLERDWRAEADG-GFTAVQRRIFELEIGRAH
Mvan_2246|M.vanbaalenii_PYR-1 ----DNFDETVHLALGAAGYLERDWRAGQDG-GFTAVQRRIFELEIGRAH
MSMEG_0578|M.smegmatis_MC2_155 ----ENFDESVHLALGGAGYLAADYRCADDG-GFSAVRRRIWELEIGRAH
TH_2587|M.thermoresistible__bu ----DNFDEGVHTALGAAGYLEKDFRSEAEG-GWNALRRRIWELEIGRAH
MAV_5127|M.avium_104 ----ENFSEPVHVALGEAGYLESDWKLESEG-GFDPVRRRIFQLEIGRAH
MMAR_4010|M.marinum_M ----DNFHEGLHLALGAAGYLAAEWKPEADG-GFSRVRRRIWELEKRRAH
MUL_3874|M.ulcerans_Agy99 ----DNFHEGLHLALGAAGYLAAEWKPEADG-GFSRVRRRIWELEKRRAH
MLBr_00737|M.leprae_Br4923 ------FPEEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVD
. :. *: * * : * * .
Mb3534|M.bovis_AF2122/97 AP-VPFLTINSVAPT-IMAYGTDEQKRFFLPRIAAGDLHFSIGYSEPGAG
Rv3504|M.tuberculosis_H37Rv AP-VPFLTINSVAPT-IMAYGTDEQKRFFLPRIAAGDLHFSIGYSEPGAG
MAB_0615|M.abscessus_ATCC_1997 VP-MPLVTLQTVGPT-LQKYGTEEQKKKFLPGILAGEIHFAIGYTEPEAG
Mflv_4100|M.gilvum_PYR-GCK TPWFHWPTTAMVANA-VDHFGSDELKDEVLPQVLAGRYRLCLGYTEPEGG
Mvan_2246|M.vanbaalenii_PYR-1 TPWFHWGTTSMVARA-LDQFGSDELKDEVLDRVLSGEFRLCLGYTEPDGG
MSMEG_0578|M.smegmatis_MC2_155 TPWFHWGTTAMAAHT-VEKFGTPELVEEVLPGVLSGRVRICLGYTEPEGG
TH_2587|M.thermoresistible__bu TPWFHWGTTAMVAQS-VEKFGTPELRDEVIPGVLTGEIRLCLGYTEPEGG
MAV_5127|M.avium_104 TPWFHWGTTAVVARL-VKQFGAPELADAILPGVLSGKIRLCLGYTEPEGG
MMAR_4010|M.marinum_M VPWVTWGTTAMVARS-VAKFGSPELVEEVLPGVFSGHVRMCLGYTEPEGG
MUL_3874|M.ulcerans_Agy99 VPWVTWGTTAMVARS-VAKFGSPELVEEVLPGVFSGHVRMCLGYTEPEGG
MLBr_00737|M.leprae_Br4923 ASASLIPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAG
.. : . : *: * .: : : . . :* .*
Mb3534|M.bovis_AF2122/97 TDLANLRTTAVRDGDD--YVVNGQKMWTSLIQYADYVWLAVRTNPESSGA
Rv3504|M.tuberculosis_H37Rv TDLANLRTTAVRDGDD--YVVNGQKMWTSLIQYADYVWLAVRTNPESSGA
MAB_0615|M.abscessus_ATCC_1997 TDLASLRTTAVRDGDH--YVVNGQKIFTTGAHQAQYIWLACRTDP---SA
Mflv_4100|M.gilvum_PYR-GCK SDIATCKTRAVREADGSTWIINGSKMFTSNAHHAQYVYLITNTDP---QA
Mvan_2246|M.vanbaalenii_PYR-1 SDVATCKTRAVRDGDG--WIVNGSKMFTSNAHHAQYVFLITNTDP---AA
MSMEG_0578|M.smegmatis_MC2_155 SDVATCKTRAVRDGDA--WIINGSKMFTSNAHNAQYVFLVTNTDP---EA
TH_2587|M.thermoresistible__bu SDVATCRTRAVREADGSSWIINGAKMFTSNAHHAQYVFLLTNTDP---AA
MAV_5127|M.avium_104 SDVATCKTRAVRDGSG--WIINGSKMFTSNAQNAEYVFLLTNTDP---RR
MMAR_4010|M.marinum_M SDVATCKTRALRDGDS--WLINGSKMFTTGAHNCQYVFLITNTDP---QA
MUL_3874|M.ulcerans_Agy99 SDVATCKTRALRDGDS--WLINGSKMFTTGAHNCQYVFLITNTDP---QA
MLBr_00737|M.leprae_Br4923 SDAASMRTRAKADGDD--WILNGFKCWITNGGKSTWYTVMAVTDP----D
:* *. :* * :.. :::** * : : . : : *:*
Mb3534|M.bovis_AF2122/97 KKHRGISVLIVPTTAEGFSWTPVHTMAGP---DTSATYYSDVRVPVANRV
Rv3504|M.tuberculosis_H37Rv KKHRGISVLIVPTTAEGFSWTPVHTMAGP---DTSATYYSDVRVPVANRV
MAB_0615|M.abscessus_ATCC_1997 PKHKGISILIVDTKDPGYSWTPIITNDGAH--HTNATYYTDVRVPVEMLV
Mflv_4100|M.gilvum_PYR-GCK PKHQSLTMFLVPLDSPGVEIQPIRTVDGD---RTNITFYSDVRVDDRYRI
Mvan_2246|M.vanbaalenii_PYR-1 PKHQSLTMFLVPLDATGVEIQPIRTVDGD---RTNITFYSDVRIDDRYRV
MSMEG_0578|M.smegmatis_MC2_155 PKHNSLTMFLVPLGTPGVEIQGIRTVDGD---RTNITYYSDVRVSDRYRV
TH_2587|M.thermoresistible__bu PKHQSLTMFLVPLDTPGIEIGPIRTVDGD---RTNIVYYSDVRVDDHYRI
MAV_5127|M.avium_104 PKHKNLTMFLVPLDSPGIEIQGIRTVDGD---RTNIVYYSDVRVDDLYRI
MMAR_4010|M.marinum_M RKHKSLTMFLVPLDSAGIEIQGIRTVDGD---RTNIVYYSDVRIDDKYRL
MUL_3874|M.ulcerans_Agy99 RKHKSLTMFLVPLDSAGIEIQGIRTVDGD---RTNIVYYSDVRIDDKYRL
MLBr_00737|M.leprae_Br4923 KGANGISAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRII
..:: ::* * . . * *. :: . *: :
Mb3534|M.bovis_AF2122/97 GEENAGWKLVTNQLNHERVALVSPAP--IFGCLREVREWAQNTKDAGGTR
Rv3504|M.tuberculosis_H37Rv GEENAGWKLVTNQLNHERVALVSPAP--IFGCLREVREWAQNTKDAGGTR
MAB_0615|M.abscessus_ATCC_1997 GEENAGWKLITTQLNHERVSLGPSGR--IAGMYDRVYEWAS-KPGPDGVA
Mflv_4100|M.gilvum_PYR-GCK GPVNGGWGVLREALNAEHGTVERDAS--GLQKIAVMTEHALLLAEEVDRV
Mvan_2246|M.vanbaalenii_PYR-1 GAVNGGWAVLREALNAEHGTVEHDDS--GLNKIAVMTEHATLLADEVDRI
MSMEG_0578|M.smegmatis_MC2_155 GDVNGGWGVLRGALDVEHGTFERDTH--GLQKIATMTEHITLMAEALDLV
TH_2587|M.thermoresistible__bu GEVNGGWTVLREALNVEHGTVERDSQ--GLQKLATMTEHALLTAEGLDWA
MAV_5127|M.avium_104 GEVNGGWTVMRFALDAEHGITDPQDH--GLQNISMLSEHGHLMAEAADGV
MMAR_4010|M.marinum_M GAVNGGWTVLREPLNVEHGAVAAAPD--GLQDTSIMMHQAGSMAEAVDRA
MUL_3874|M.ulcerans_Agy99 GAVNGGWTVLREPLNVEHGAVAAAPD--GLQDTSIMMHQAGSMAEAVDRA
MLBr_00737|M.leprae_Br4923 GEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESI
* . *: *: :
Mb3534|M.bovis_AF2122/97 LIDSEWVQLNLARVHAKAEVLKLINWELASSQSGPKDAGPSPADASAAKV
Rv3504|M.tuberculosis_H37Rv LIDSEWVQLNLARVHAKAEVLKLINWELASSQSGPKDAGPSPADASAAKV
MAB_0615|M.abscessus_ATCC_1997 PLSHEDVRRVLGEMKAVWRLNELLNWQVASS-----GDDISMADAAATKI
Mflv_4100|M.gilvum_PYR-GCK ASVVG-------DRLGDGEVAYRLGRSVARL------EAALSTPEMFGRV
Mvan_2246|M.vanbaalenii_PYR-1 AGEMYRS-----GRLDDDSIGYRLGRSIARL------EAALSTPEMFGRV
MSMEG_0578|M.smegmatis_MC2_155 AAQAP----------GDGASRFRLGRGIACT------EAAMSTPDMYGRV
TH_2587|M.thermoresistible__bu VAVAASPGPDGRRLLDDESVQYRLGRSVARL------EAALSTPAEYGRV
MAV_5127|M.avium_104 AAILARPDAAGRRPIDDESVKYRLGRGMARI------EAAMSTPGMYGRV
MMAR_4010|M.marinum_M ASCVMRPDPDGRRPIDDTSVAYRLGRSVARM------EAALSAPSIFGRV
MUL_3874|M.ulcerans_Agy99 ASCVMRPDPDGRRPIDDTSVAYRLGRSVARM------EAALSAPSIFGRV
MLBr_00737|M.leprae_Br4923 STFQSIQFMLADMAMKVEAARLIVYAAAARAE---RGEPDLGFISAASKC
: * :
Mb3534|M.bovis_AF2122/97 FGTELATEAYRLLMEVLGTAATLRQNSPGALLRGRVERMHRACLILTFGG
Rv3504|M.tuberculosis_H37Rv FGTELATEAYRLLMEVLGTAATLRQNSPGALLRGRVERMHRACLILTFGG
MAB_0615|M.abscessus_ATCC_1997 LATEWIQKLGRLSEGVVGRYGDPADANTAETLE-WLDAQTKRHLVITFGG
Mflv_4100|M.gilvum_PYR-GCK AIAQTLRDITPDLMDILGPASVLPSGRS-------AEYLFRLALPMGIYG
Mvan_2246|M.vanbaalenii_PYR-1 AIAQTLRDITPDLMDVLGTTSVVPEGLN-------AEYLFRLALPTGIYG
MSMEG_0578|M.smegmatis_MC2_155 AIAQTMRDVTPDLMDILGPAGALTDG---------VEYIFRLAGPTGIYG
TH_2587|M.thermoresistible__bu AIAQMMRDITPELMDVLGAASALPVDTTGAAADGAVEYLFRLASPVAIYG
MAV_5127|M.avium_104 ALIQTMREVSQELMDLLGTASALPTDTPGSPDDGAIEFIFRHAVPAGIYG
MMAR_4010|M.marinum_M AIAQTMRDISPDLMDILGSAAALPFGTDGAVDDGGAEYVYRFAPLVGIYG
MUL_3874|M.ulcerans_Agy99 AIAQTMRDISPDLMDILGSAAALPFGTDGAVDDGGAEYVYRFAPLVGIYG
MLBr_00737|M.leprae_Br4923 FASDIAMEVTTDAVQLFGGAGYTSDFP--------VERFMRDAKITQIYE
: . :.* . : : :
Mb3534|M.bovis_AF2122/97 GTNEVQRDIIGMVALGLPRANR--------
Rv3504|M.tuberculosis_H37Rv GTNEVQRDIIGMVALGLPRANR--------
MAB_0615|M.abscessus_ATCC_1997 GVNEVMREMVSTAGLGTPRVPR--------
Mflv_4100|M.gilvum_PYR-GCK GTLDVFRNMIAQHALGLGKPNYSPPR----
Mvan_2246|M.vanbaalenii_PYR-1 GTLDVFRNMIAQHALGLGRPNYSPPVQRP-
MSMEG_0578|M.smegmatis_MC2_155 GTLEVFRNMIAQHGLGLGKPNYAQPVKKVS
TH_2587|M.thermoresistible__bu GTVEVFRNMIAQHALGLGKPSYGTPVKR--
MAV_5127|M.avium_104 GTMEVFRNMIAQHELGLGRPSYGR------
MMAR_4010|M.marinum_M GTLEVFRNMIAQHVLGLGKPSYPHRT----
MUL_3874|M.ulcerans_Agy99 GTHEVFRNMIAQHVLGLGKPSYPHRT----
MLBr_00737|M.leprae_Br4923 GTNQIQRVVMSRALLR--------------
*. :: * ::. *