For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2023 | - | - | 100% (219) | transcriptional regulator, TetR family protein |
M. thermoresistible (build 8) | TH_3488 | - | 3e-26 | 31.31% (198) | PUTATIVE - |
M. thermoresistible (build 8) | TH_0537 | - | 1e-18 | 36.00% (200) | transcriptional regulator, TetR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1561 | - | 1e-05 | 27.83% (212) | transcriptional regulator |
M. gilvum PYR-GCK | Mflv_2432 | - | 1e-107 | 89.81% (216) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv1534 | - | 1e-05 | 27.83% (212) | transcriptional regulator |
M. leprae Br4923 | MLBr_01070 | - | 2e-06 | 29.29% (99) | putative TetR-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_4479 | - | 4e-08 | 34.95% (103) | TetR family transcriptional regulator |
M. marinum M | MMAR_4752 | - | 1e-105 | 87.96% (216) | transcriptional regulatory protein |
M. avium 104 | MAV_1626 | - | 4e-22 | 35.90% (195) | hypothetical protein MAV_1626 |
M. smegmatis MC2 155 | MSMEG_4847 | - | 1e-107 | 90.78% (217) | transcriptional regulator, TetR family protein |
M. ulcerans Agy99 | MUL_0323 | - | 1e-104 | 87.50% (216) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_4220 | - | 1e-106 | 89.81% (216) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2432|M.gilvum_PYR-GCK MARRSPVQSVHVFPSRAASEPPVTTPSEEPAWKQRAVERSIKTAKLRAAQ Mvan_4220|M.vanbaalenii_PYR-1 MARRSPVQSVRVLPNRPASEPPVTSPSEEPAWKQRAVERSIKTAKLRAAQ MSMEG_4847|M.smegmatis_MC2_155 ----------------------MTSAGEEPAWKQRAVERSIKTAKLRAAQ TH_2023|M.thermoresistible__bu ----------------------VTTPSEEPAWKQRAVERSIKTAKLRAAQ MMAR_4752|M.marinum_M ----------------------MTNPSEEPAWKQRAVERSIKTAKLRAAQ MUL_0323|M.ulcerans_Agy99 ----------------------MTNPSEEPAWKQRAVERSIKTAKLRAAQ Mb1561|M.bovis_AF2122/97 -------------------------MSRASARRRRAVSDEDK------SQ Rv1534|M.tuberculosis_H37Rv -------------------------MSRASARRRRAVSDEDK------SQ MAV_1626|M.avium_104 ----------------------MAEPNEDVEIT----------------- MAB_4479|M.abscessus_ATCC_1997 ------------------------MAASPGLWGGRTAAQRR-------AE MLBr_01070|M.leprae_Br4923 ----------------------MIVVGNFTQSNYVPASRGRRSSQLSGDD Mflv_2432|M.gilvum_PYR-GCK RVQRFLDAAQAIIIEKGSTDFTVQEVVDRSRQSLRSFYLQFDGKHELLLA Mvan_4220|M.vanbaalenii_PYR-1 RVQRFLDAAQAIIIEKGSTDFTVQEVVDRSRQSLRSFYLQFDGKHELLLA MSMEG_4847|M.smegmatis_MC2_155 RVQRFLDAAQAIIIEKGSTDFTVQEVVDRSRQSLRSFYLQFDGKHELLLA TH_2023|M.thermoresistible__bu RVQRFLDAAQAIIIEKGSTDFTVQEVVDRSRQSLRSFYLQFDGKHELLLA MMAR_4752|M.marinum_M RVQRFLDAAQAIIIEKGSTDFTVQEVVDRSRQSLRSFYLQFDGKHELLLA MUL_0323|M.ulcerans_Agy99 RVQRFLDAAQAIIIEKGSTDFTVQEVVDRSRQSLRSFYLQFDGKHELLLA Mb1561|M.bovis_AF2122/97 RRDEILAAAKIVFAHKGFHATTVADIAKQAGLAYGLIYWYFDSKDDLFHA Rv1534|M.tuberculosis_H37Rv RRDEILAAAKIVFAHKGFHATTVADIAKQAGLAYGLIYWYFDSKDDLFHA MAV_1626|M.avium_104 RGDRFIKTAVAILGETGRTDFTVQEVVARSKTSLRAFYQHFSSKDELLLA MAB_4479|M.abscessus_ATCC_1997 RRERLVGAAQEIWIEQGWAAVTMRGVCARTSLNDRYFYEDFADREDLLAA MLBr_01070|M.leprae_Br4923 REQAILAVAERLLAERPLGDFSVDELAKGAGISRPTFYFYFPSKNAVLLS * : :: .* : . :: : : :* * .:. :: : Mflv_2432|M.gilvum_PYR-GCK LFED-----ALSRSAEQIRAATSGQESPIDRLKVAIQLLFESSRPDPSAK Mvan_4220|M.vanbaalenii_PYR-1 LFED-----ALSRSADQIRAATGGHEEPIERLKVAIQLLFESSRPDPAAK MSMEG_4847|M.smegmatis_MC2_155 LFED-----ALSRSADQIRAATASHSDPLERLKVAIQLLFESSRPDPAAK TH_2023|M.thermoresistible__bu LFED-----ALSRSADQIRAATAGKTDPLERLKTAIELLFESSRPDPNAK MMAR_4752|M.marinum_M LFED-----ALSRSADQIRAATETHADPLERLKVAVELLYEASRPDPTAK MUL_0323|M.ulcerans_Agy99 LFED-----ALSRSADQIRAATETHADPLERLKVAVELLYEASRPDPTAK Mb1561|M.bovis_AF2122/97 LMAGEEEALRAHVAAELARVGGSTEAPLRALLQAAVQATFEFFETDKATV Rv1534|M.tuberculosis_H37Rv LMAGEEEALRAHVAAELARVGGSTEAPLRALLQAAVQATFEFFETDKATV MAV_1626|M.avium_104 LFDR-----TIAQSAQTWRAETAGLDSTAALKLVIDRVSQQPESSTQDSL MAB_4479|M.abscessus_ATCC_1997 VWDG---VRDELIAQISAIVAEDPDRPPLDTLRKTITLVVERVSGDPGWA MLBr_01070|M.leprae_Br4923 LLDD----LNMKSRSAVEALAEQLPADPAAVWRSAITAFFEVCGTHR--A : : Mflv_2432|M.gilvum_PYR-GCK RPLFTDFAPRLLVSHPSEVKVAHAPLLALLTELMEEASEAGQLREGINPK Mvan_4220|M.vanbaalenii_PYR-1 RPLFTDFAPRLLVSHPSEVKVAHAPLLALLTELMEEASAAGQLRDGINPK MSMEG_4847|M.smegmatis_MC2_155 RPLFTDFAPRLLVSHPSEVKVAHAPLLALLTELMEEAGEAGLLREGINPK TH_2023|M.thermoresistible__bu RPLFTDFAPRLLVSHPEEVKVAHAPLLALLTELMEEAAAAGKLREGINPK MMAR_4752|M.marinum_M RPLFTDFAPRLLVSHPAEVKVAHAPLVALLTELMEAAAEAGELREDLNPR MUL_0323|M.ulcerans_Agy99 RPLFTDFAPRLLVSHPTEVKVAHAPLVTLLTELMEAAAEAGELREDLNPR Mb1561|M.bovis_AF2122/97 KLLFRD-AYALGGRFEEHLGGIYERFIDDIEAVVVAAQRRGEVVE--APS Rv1534|M.tuberculosis_H37Rv KLLFRD-AYALGGRFEEHLGGIYERFIDDIEAVVVAAQRRGEVVE--APS MAV_1626|M.avium_104 NRALTLYNQHLAETRPREYARVLSPLHRLIRDIVGQGITEGVFNPGLDVG MAB_4479|M.abscessus_ATCC_1997 DIIFVRHVGSAVLEQ-RRIDLLHQATAVLIAAAEPYLVKNIDRTGFRMDT MLBr_01070|M.leprae_Br4923 VAVAGAAAKATSPEVRRLWSTVMQQWIDYNTAAIQAERKCGVAPDTIPAE Mflv_2432|M.gilvum_PYR-GCK RMAAMTMQTVM-FVAQSSGEYDENAAHPITADEVWDFCAHGFAAG----- Mvan_4220|M.vanbaalenii_PYR-1 RMAAMTMQTVM-FVAQSSGDVDENAANPITADEVWDFCAHGFAAV----- MSMEG_4847|M.smegmatis_MC2_155 RMAAMTMQTVM-FVAQSSGGADESTPNPITADEVWDFVAHGFSADPPA-- TH_2023|M.thermoresistible__bu RMAAMTMQTVM-FVAQSSGGTGDGTVHPITADEVWDFVAHGFAADD---- MMAR_4752|M.marinum_M RIAAMTMQTVM-FIAQSSGGTDDATTHPITADEVWDFCSRGFAAS----- MUL_0323|M.ulcerans_Agy99 RIAAMTMQTVM-FIAQSSGGTDDATTHPITADEVWDFCSRGFAAS----- Mb1561|M.bovis_AF2122/97 RMAAYTLAALVGQLAHRRLNTDDNVTAAQVADFVVSLVLDGLRPRALAVG Rv1534|M.tuberculosis_H37Rv RMAAYTLAALVGQLAHRRLNTDDNVTAAQVADFVVSLVLDGLRPRALAVG MAV_1626|M.avium_104 AAAAIVMQTMMGAQRLHWLGAELNG-TPVDAGQLYDFCSRALGIRDTDED MAB_4479|M.abscessus_ATCC_1997 LVGIGGFSELVNAWRSGLLDVSADELIEHSTRIGATLASRYLAAG----- MLBr_01070|M.leprae_Br4923 DLAVALQLMTERVMAATFSDEKPLIPDKKVIDTLVHIWLASIYGS----- . : : Mflv_2432|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4220|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_4847|M.smegmatis_MC2_155 -------------------------------------------------- TH_2023|M.thermoresistible__bu -------------------------------------------------- MMAR_4752|M.marinum_M -------------------------------------------------- MUL_0323|M.ulcerans_Agy99 -------------------------------------------------- Mb1561|M.bovis_AF2122/97 ARGGRAART----------------------------------------- Rv1534|M.tuberculosis_H37Rv ARGGRAART----------------------------------------- MAV_1626|M.avium_104 AGAPSLAELFGQIGMRPGTRNGQFAMTMPVSPAVVNTSGALQGGLIATLV MAB_4479|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01070|M.leprae_Br4923 -------------------------------------------------- Mflv_2432|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4220|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_4847|M.smegmatis_MC2_155 -------------------------------------------------- TH_2023|M.thermoresistible__bu -------------------------------------------------- MMAR_4752|M.marinum_M -------------------------------------------------- MUL_0323|M.ulcerans_Agy99 -------------------------------------------------- Mb1561|M.bovis_AF2122/97 -------------------------------------------------- Rv1534|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1626|M.avium_104 DVAGGQFGLDYLRPGTTMTTADLFVRYLRPVRQGSAFAVPRMLRSGRRAM MAB_4479|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_01070|M.leprae_Br4923 -------------------------------------------------- Mflv_2432|M.gilvum_PYR-GCK -------------------------------------- Mvan_4220|M.vanbaalenii_PYR-1 -------------------------------------- MSMEG_4847|M.smegmatis_MC2_155 -------------------------------------- TH_2023|M.thermoresistible__bu -------------------------------------- MMAR_4752|M.marinum_M -------------------------------------- MUL_0323|M.ulcerans_Agy99 -------------------------------------- Mb1561|M.bovis_AF2122/97 -------------------------------------- Rv1534|M.tuberculosis_H37Rv -------------------------------------- MAV_1626|M.avium_104 VMQVDIFGDGDDELLATATVNFAIINGDTPSSGLPPAE MAB_4479|M.abscessus_ATCC_1997 -------------------------------------- MLBr_01070|M.leprae_Br4923 --------------------------------------