For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1963 | - | 100% (387) | PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE | |
| M. thermoresistible (build 8) | TH_3493 | - | 2e-36 | 45.25% (179) | PUTATIVE short-chain dehydrogenase/reductase SDR |
| M. thermoresistible (build 8) | TH_3670 | - | 4e-19 | 36.84% (171) | PUTATIVE short-chain dehydrogenase/reductase SDR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1914c | - | 1e-100 | 65.96% (282) | short chain dehydrogenase |
| M. gilvum PYR-GCK | Mflv_0407 | - | 6e-36 | 43.58% (179) | short chain dehydrogenase |
| M. tuberculosis H37Rv | Rv1882c | - | 1e-100 | 65.96% (282) | short chain dehydrogenase |
| M. leprae Br4923 | MLBr_01094 | - | 7e-15 | 32.74% (168) | short chain alcohol dehydrogenase |
| M. abscessus ATCC 19977 | MAB_1177 | - | 1e-22 | 46.23% (106) | hypothetical protein MAB_1177 |
| M. marinum M | MMAR_2770 | - | 6e-98 | 65.71% (280) | short-chain type dehydrogenase/reductase |
| M. avium 104 | MAV_2820 | - | 3e-96 | 62.77% (282) | short chain dehydrogenase |
| M. smegmatis MC2 155 | MSMEG_3542 | - | 1e-25 | 54.08% (98) | hypothetical protein MSMEG_3542 |
| M. ulcerans Agy99 | MUL_2977 | - | 3e-97 | 65.70% (277) | short chain dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_0267 | - | 3e-37 | 46.37% (179) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0407|M.gilvum_PYR-GCK ----MTKSVFITGAATGIGRATALLFAGRGYRVGGYDLDEDGLAVLAADI
Mvan_0267|M.vanbaalenii_PYR-1 ----MTKSVFITGAATGIGRATALLFAQRGYRVGGYDIDEAGLRLLAADI
Mb1914c|M.bovis_AF2122/97 -----MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQL
Rv1882c|M.tuberculosis_H37Rv -----MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQL
MAV_2820|M.avium_104 -----MKSIFITGAGSGMGREGAKLFHAKGWRVGAVDRNDDGLATLQQEL
MMAR_2770|M.marinum_M -----MKSVFITGAGSGMGREGAKLFHAKGWRVAAVDRDGAGLDALGAEL
MUL_2977|M.ulcerans_Agy99 -----MKSGFVTGAGSGMGREGAKLFHAKGWRVAAVDRDGAGLDALGAEL
TH_1963|M.thermoresistible__bu VTRQTARAVFITGAGSGMGRAGAELFHARGWRVGAVDRNAEGLSGLRAQL
MAB_1177|M.abscessus_ATCC_1997 --------------------------------------------------
MSMEG_3542|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_01094|M.leprae_Br4923 MEGFAGKVAVVTGAGSGIGQALAIELARSGAKLAISDVDGEGLAQTEGQL
Mflv_0407|M.gilvum_PYR-GCK TAVGGTPVVAHLDVTDPDEVARRLAEFAEG-SGGRIDVLINNAGLLNAGR
Mvan_0267|M.vanbaalenii_PYR-1 TAVGGRPVVGRLDVTDADEVAHRLAEFVDA-AGGRLDVLINNAGLLQAGR
Mb1914c|M.bovis_AF2122/97 GAE--RLWARAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGW
Rv1882c|M.tuberculosis_H37Rv GAE--RLWARAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGW
MAV_2820|M.avium_104 GDD--RLWTRAVDVTDKAALDGALADFCAGNTGGGLDMMWNNAGIGESGW
MMAR_2770|M.marinum_M GTE--RLWTRVVDVTDRDALDRALADFCAGTSHGGLDMMWNNAGIGEGGW
MUL_2977|M.ulcerans_Agy99 GTE--RLWTRVVDVTDRDALDRALADFCAGTSHGGLDMMWNNAGIGEGGW
TH_1963|M.thermoresistible__bu GPE--RLFTGQVDVTDRSALEAGLARFCADNTGGGLDMMWNNAGIGASGW
MAB_1177|M.abscessus_ATCC_1997 --------------------------------------------------
MSMEG_3542|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_01094|M.leprae_Br4923 KAIGASARTDRLDVTEREAFLTYADVVHEN--FGKVNQIYNNAGIAFTGD
Mflv_0407|M.gilvum_PYR-GCK FEEIPLEVHHREIEVNVKGVVNGLHAAFPYLKGTPGAVVVNLASASAIYG
Mvan_0267|M.vanbaalenii_PYR-1 FEDIPLPVHHRAIEVNVKGVVNGLHAAFPYLRDTPDAVVVNLSSASAIYG
Mb1914c|M.bovis_AF2122/97 FEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGTYG
Rv1882c|M.tuberculosis_H37Rv FEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGTYG
MAV_2820|M.avium_104 FEDVPYDAAMRVVDVNYKAVLTGAYGALPYLKKSAGSLMFSTSSSSATYG
MMAR_2770|M.marinum_M FEDVPYDAAMRVVDVNFKAVLTGAYGALPYLRKAPGSLMFSTSSSSATYG
MUL_2977|M.ulcerans_Agy99 FEDVPYDAAMRVVDVNFKAVLTGAYGALPYLRKAPGSLMFSTSSSSATYG
TH_1963|M.thermoresistible__bu FEDVPHEAALRVVAINFTAVLTGAYAALPYLRRTPGSLMFSTSSSSATYG
MAB_1177|M.abscessus_ATCC_1997 ---------------------MQLPSSFDGLVTDGGKSIVYGEPYTTADG
MSMEG_3542|M.smegmatis_MC2_155 -MIRPYRDRCEEFPTTMETRAVPIRDALDRLTDDTDASRVFGEPYVTPDG
MLBr_01094|M.leprae_Br4923 VEVSHFKDIERVMDVDYWGVVNGTKAFLPYLISSGDGHVINISSVFGLFS
: * . . . .
Mflv_0407|M.gilvum_PYR-GCK QAELANYSATKFFVRAITEALNLEWGHYG--IRVIDMWPLYVNTAMTKD-
Mvan_0267|M.vanbaalenii_PYR-1 QVELANYSATKFYVRAITEALNLEWAQHG--IRVIDMWPLYVNTAMTQG-
Mb1914c|M.bovis_AF2122/97 MPRIAVYSATKHAVKGLTEALSVEWQRHG--VRVADVLPGLIDTAILTST
Rv1882c|M.tuberculosis_H37Rv MPRIAVYSATKHAVKGLTEALSVEWQRHG--VRVADVLPGLIDTAILTST
MAV_2820|M.avium_104 MPRLAVYSSTKHAVKGLTEALSVEWQRHG--VRVADVLPGLIDTAILTTT
MMAR_2770|M.marinum_M MPRLAVYSATKHAVKGLTEALSAEWRRHG--VRVADVLPGLIDTAILTST
MUL_2977|M.ulcerans_Agy99 MPRLAVYSATKHAVKGLTEALSAEWRRHG--VRVADVLPGLIDTAILTST
TH_1963|M.thermoresistible__bu MPQLAVYSATKHAVKGLTEALSVEWQRHG--VRVADIA------------
MAB_1177|M.abscessus_ATCC_1997 TLVITVAKVRNRGRGSEGEPLETVAKPLG--VFVIKDGDAQWRPAFN---
MSMEG_3542|M.smegmatis_MC2_155 ATVIPVSTVGRHG-----------ARPAG--VFVVTDGKPVWEPAVD---
MLBr_01094|M.leprae_Br4923 VPGQAAYNSAKFAVRGFTEALREEMALAGRPVNVTTVYPGGIKTAIARN-
. . . * : *
Mflv_0407|M.gilvum_PYR-GCK ---------------VKTGTTQSLGIRLTAQDIANDIVAAVDATWAR---
Mvan_0267|M.vanbaalenii_PYR-1 ---------------VKTGTTQSLGIRLTAQDIARDIVTAVEATWPR---
Mb1914c|M.bovis_AF2122/97 RQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTR---
Rv1882c|M.tuberculosis_H37Rv RQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTR---
MAV_2820|M.avium_104 TNHSNDGAAPMTAEELRATAPKKGMLRLMPASSVAEVAWRAYNHPRR---
MMAR_2770|M.marinum_M RQHSDASAPTLSSEQIRAAAPKKGMFRLLPASSVAEAAWQAYQHPTR---
MUL_2977|M.ulcerans_Agy99 RQHSDASAPTLSSEQIRAAAPKKGMFRLLPASSVAEAAWHAYQHPTR---
TH_1963|M.thermoresistible__bu -----------------ARAPRRGMFRLLPPSSVAETAWAAYHDTGRSRW
MAB_1177|M.abscessus_ATCC_1997 -------------------ADRASTLGILTGMLAAALGLLAIIRRPP---
MSMEG_3542|M.smegmatis_MC2_155 -------------------STRIAMLGELIGLVAATLATVAMVRRPP---
MLBr_01094|M.leprae_Br4923 -----------------ATAAEGLDVSKIASRFDTWVAHTSPQHAARIIL
: . .
Mflv_0407|M.gilvum_PYR-GCK --KALAQVHFPVGLQAKALALGARFSPAWLTRLVNKGLAGS---------
Mvan_0267|M.vanbaalenii_PYR-1 --RLVKQVHFPVGGQAKALALGSRFSPAWLTRLINKRLAGS---------
Mb1914c|M.bovis_AF2122/97 -------LHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK----
Rv1882c|M.tuberculosis_H37Rv -------LHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK----
MAV_2820|M.avium_104 -------LHWYVPRSIRLIDVFKGLSPEFVRRSIVKSLPALMPKRQ----
MMAR_2770|M.marinum_M -------LHWYVPPSVRWIDRLKGVSPEFVRSRILKSLPTFGAGQQ----
MUL_2977|M.ulcerans_Agy99 -------LHWYVPPSIRWIDRLKGVSPEFVRSRILKSLPTFGTGQQ----
TH_1963|M.thermoresistible__bu GRTRAGRLHWYVPDSLKWIDRLKGVSAEFVRGRIVKQLPALIEEDDRMKS
MAB_1177|M.abscessus_ATCC_1997 ------------WPDLTSPGWSPAENPQWWRGRR----------------
MSMEG_3542|M.smegmatis_MC2_155 ------------WPDVRVTVSRKS--------------------------
MLBr_01094|M.leprae_Br4923 KAVRKKKARVLVGPDAKVANVVVRFSGGAGYQRLFAQVASRLILNQR---
.
Mflv_0407|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0267|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb1914c|M.bovis_AF2122/97 --------------------------------------------------
Rv1882c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_2820|M.avium_104 --------------------------------------------------
MMAR_2770|M.marinum_M --------------------------------------------------
MUL_2977|M.ulcerans_Agy99 --------------------------------------------------
TH_1963|M.thermoresistible__bu PADIEGFEIDSRARQVYGEPHVTADGTTIVPVARVSRRGTGDAARVTARP
MAB_1177|M.abscessus_ATCC_1997 --------------------------------------------------
MSMEG_3542|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_01094|M.leprae_Br4923 --------------------------------------------------
Mflv_0407|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0267|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb1914c|M.bovis_AF2122/97 --------------------------------------------------
Rv1882c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_2820|M.avium_104 --------------------------------------------------
MMAR_2770|M.marinum_M --------------------------------------------------
MUL_2977|M.ulcerans_Agy99 --------------------------------------------------
TH_1963|M.thermoresistible__bu VGVLVIKDGRATWKPTVDSTRIALFSQLIGLVAAALAGLAMVRRPPWPDL
MAB_1177|M.abscessus_ATCC_1997 --------------------------------------------------
MSMEG_3542|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_01094|M.leprae_Br4923 --------------------------------------------------
Mflv_0407|M.gilvum_PYR-GCK -------------------
Mvan_0267|M.vanbaalenii_PYR-1 -------------------
Mb1914c|M.bovis_AF2122/97 -------------------
Rv1882c|M.tuberculosis_H37Rv -------------------
MAV_2820|M.avium_104 -------------------
MMAR_2770|M.marinum_M -------------------
MUL_2977|M.ulcerans_Agy99 -------------------
TH_1963|M.thermoresistible__bu HGDISSRPRPARPARSGRR
MAB_1177|M.abscessus_ATCC_1997 -------------------
MSMEG_3542|M.smegmatis_MC2_155 -------------------
MLBr_01094|M.leprae_Br4923 -------------------