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M. thermoresistible (build 8) TH_0604 (sigG)

annotation: PROBABLE ALTERNATIVE RNA POLYMERASE SIGMA FACTOR SIGG (RNA POLYMERASE ECF TYPE SIGMA FACTOR)
coordinates: 1282719 - 1283726
length: 336

aa seq not available

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. thermoresistible (build 8) TH_0604 sigG - 100% (336) PROBABLE ALTERNATIVE RNA POLYMERASE SIGMA FACTOR SIGG (RNA POLYMERASE ECF TYPE SIGMA FACTOR)
M. thermoresistible (build 8) TH_1142 - 3e-17 25.71% (315) RNA polymerase sigma factor, sigma-70 family protein
M. thermoresistible (build 8) TH_1144 - 1e-16 28.84% (319) RNA polymerase sigma factor, sigma-70 family protein

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb0188c sigG 1e-124 66.57% (344) RNA polymerase factor sigma-70
M. gilvum PYR-GCK Mflv_0519 - 1e-138 70.29% (340) RNA polymerase factor sigma-70
M. tuberculosis H37Rv Rv0182c sigG 1e-124 66.57% (344) RNA polymerase factor sigma-70
M. leprae Br4923 MLBr_01076 sigE 3e-11 30.13% (156) RNA polymerase sigma factor SigE
M. abscessus ATCC 19977 MAB_4553 - 1e-121 65.29% (314) RNA polymerase factor sigma-70
M. marinum M MMAR_0426 sigG 1e-128 71.92% (317) alternative RNA polymerase sigma factor SigG
M. avium 104 MAV_4998 - 1e-126 71.79% (319) RNA polymerase factor sigma-70
M. smegmatis MC2 155 MSMEG_0219 - 1e-137 71.47% (340) RNA polymerase factor sigma-70
M. ulcerans Agy99 MUL_1076 sigG 1e-126 66.11% (357) RNA polymerase factor sigma-70
M. vanbaalenii PYR-1 Mvan_0149 - 1e-141 72.35% (340) RNA polymerase factor sigma-70

CLUSTAL 2.0.9 multiple sequence alignment


Mb0188c|M.bovis_AF2122/97           MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAENSGREP
Rv0182c|M.tuberculosis_H37Rv        MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAENSGREP
MMAR_0426|M.marinum_M               -----------------------MSALAGNSTQNSIANFTAPTAERERPA
MUL_1076|M.ulcerans_Agy99           -------------MSATLRRLIDVSALAGNSTQNSIANFTAPTAERERPA
MAV_4998|M.avium_104                ------------------------------------------------MV
MAB_4553|M.abscessus_ATCC_1997      --------------------------------------------MTAHAI
TH_0604|M.thermoresistible__bu      ----------------------------MSVMLRTLLHVTVLTAPPDGGS
MSMEG_0219|M.smegmatis_MC2_155      ----------------------------MSVILRKLTTVTVLAHKLDDDS
Mflv_0519|M.gilvum_PYR-GCK          ----------------------------MSHPMRKLLFVTVLA--LDEGG
Mvan_0149|M.vanbaalenii_PYR-1       ----------------------------MSQPVRKLHFVTVTA--LDDSS
MLBr_01076|M.leprae_Br4923          ---------------------------------------------MGDGI
                                                                                      

Mb0188c|M.bovis_AF2122/97           ADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEG
Rv0182c|M.tuberculosis_H37Rv        ADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEG
MMAR_0426|M.marinum_M               GD----EFAVHAEPYRRELLAHCYRMTGSVHDAEDLVQETLLRAWKSYHR
MUL_1076|M.ulcerans_Agy99           GD----EFAVHAEPYRRELLAHCYRMTGSVHDAEDLVQETLLRAWKSYHR
MAV_4998|M.avium_104                GA----DFTAHAEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYDR
MAB_4553|M.abscessus_ATCC_1997      ED----EFLSHTEQYRREILAHCYRMTGSIHDAEDLVQETYLRGWKAYAR
TH_0604|M.thermoresistible__bu      -----DAFLADAEQYRRELLAHCYRMTGSLHDAEDLVQETFLRAWKSHHK
MSMEG_0219|M.smegmatis_MC2_155      PA---DAFLAEAQTYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSYQG
Mflv_0519|M.gilvum_PYR-GCK          AK---DAFLADAQKYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSYDR
Mvan_0149|M.vanbaalenii_PYR-1       AE---DAFLADAQRYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSFKG
MLBr_01076|M.leprae_Br4923          GMEREGRWTGNTQCPLRVVPGDESPTLDGRASPEDLIITNLLSPTIMSHP
                                           :  .::   * : ..     ..  ..***:  . *        

Mb0188c|M.bovis_AF2122/97           FAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERR
Rv0182c|M.tuberculosis_H37Rv        FAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERR
MMAR_0426|M.marinum_M               FEGKSSLRTWLHRIATNTCLSALEGRQRRPLPTGLAASGSDPTAPLVERA
MUL_1076|M.ulcerans_Agy99           FEGKSSLRTWLHRIATNTCMSALEGRQRRPLPTGLAASGSDPTAPLVERA
MAV_4998|M.avium_104                FEGKSSVRTWLHRIATNTCLSALEGRQRRPLPVGLGAPSADPTAELVERR
MAB_4553|M.abscessus_ATCC_1997      FEGKSSVRTWLYRIATNTCLTALEGKQRRPLPTGLGAPSADPLDELDERS
TH_0604|M.thermoresistible__bu      FEGKASVRTWLYKIATNACLTALDGRQRRPLPTGLGAPSSDPTDDIVARE
MSMEG_0219|M.smegmatis_MC2_155      FQGRSSVRTWLYRIATNTCLTSLEGRSRRPLPSGLGTPSSAPTDQITEHH
Mflv_0519|M.gilvum_PYR-GCK          FEGKSSVRTWLYRIATNTCLTALDGRKRRPLPSGLGGPSADPYADLTERH
Mvan_0149|M.vanbaalenii_PYR-1       FQGKSSVRTWLYRIATNTCLTALDGNKRRALPSGLGQPASDPAGELFVRP
MLBr_01076|M.leprae_Br4923          PPSRD-----------DDWVEPFDALQGTAVFDATGDKATMPSWEELVRQ
                                      .:            :  : .::.    .:  . .  .: *      : 

Mb0188c|M.bovis_AF2122/97           EVSWLEPLPDV-TDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLL
Rv0182c|M.tuberculosis_H37Rv        EVSWLEPLPDV-TDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLL
MMAR_0426|M.marinum_M               EVPWLEPLPDL-MADPADPSVIVGSRESVRLAFVAALQHLSPRQRAVLLL
MUL_1076|M.ulcerans_Agy99           EVPWLEPLPDL-MADPADPSVIVGSRESVRLAFVAALQHLSPRQRAVLLL
MAV_4998|M.avium_104                EVPWLEPLPAL-SDDPADPSVIVGSRESVRLAFVAALQYLSPRQRAVLLL
MAB_4553|M.abscessus_ATCC_1997      EIPWLEPLP----DDATDPASIVGARESVRLAFVAALQHLPAKQRAVLVL
TH_0604|M.thermoresistible__bu      EVPWLEPLP----DDAADPSTIVGSRESVRLAFVAALQHLPPRQRAVLLL
MSMEG_0219|M.smegmatis_MC2_155      EVPWLEPLPDG--DDPADPSQIVGTRESVRLAFVAALQHLSPRQRAVLVM
Mflv_0519|M.gilvum_PYR-GCK          EIAWLEPIPDDPHEDPADPSVIAESRESVRLALIAALQHLSPRQRAVLVL
Mvan_0149|M.vanbaalenii_PYR-1       EVTWLEPLPDAPREDPSDPSVIAESRESVRLAFIAALQHLPPRQRAVLVL
MLBr_01076|M.leprae_Br4923          HAARVYWLAYRLSGNQHDAEDLT-------------------QETFIRVF
                                    . . :  :.     :  *.  :.                   ::  : ::

Mb0188c|M.bovis_AF2122/97           RDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQTVRPSAADRLSAPDSP
Rv0182c|M.tuberculosis_H37Rv        RDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQTVRPSAADRLSAPDSP
MMAR_0426|M.marinum_M               RDVLQWKAAEVAEAIGTTTVAVNSLLQRARAQLETAQPSADDGLVAPDSP
MUL_1076|M.ulcerans_Agy99           RDVLQWKAAEVAQAIGTTTVAVNSLLQRARAQLETVQPSADDGLVAPDSP
MAV_4998|M.avium_104                RDVLGWRAAEVAEAIGTTTAAVNSLLQRARAQLDAVGPSADDQPAQPDSA
MAB_4553|M.abscessus_ATCC_1997      REVLQWKAQEVAEAIGSTTAAVNSLLQRARAQLHEVSP-HEETLLEPEDP
TH_0604|M.thermoresistible__bu      REVLQWRAAEVAEVLNTSTAAVNSLLQRARAQLDQVGPSEDDELVPPESP
MSMEG_0219|M.smegmatis_MC2_155      REVLQWKASEVGEAIGASTAAVNSLLQRARAQLEAVGPNEDDKIEAPDSP
Mflv_0519|M.gilvum_PYR-GCK          REVLQWKAAEVGEVIGASTAAVNSLLQRARAQLDEVAPSRDDQPVSPESP
Mvan_0149|M.vanbaalenii_PYR-1       REVLQWKAAEVGEAVGTSTAAVNSLLQRARAQLDEISPSRDDEPVPPESP
MLBr_01076|M.leprae_Br4923          RSVQNYQPGTFEGWLHRITTNLFLDMVRRRARIRMDALPDDYDRVPADEP
                                    *.*  ::.  .   :   *. :   : * *:::             .:..

Mb0188c|M.bovis_AF2122/97           EAQDLLARYIAAFEAYDIDRLVELFTAEAIWEMPPYTGWYQGAQAIVTLI
Rv0182c|M.tuberculosis_H37Rv        EAQDLLARYIAAFEAYDIDRLVELFTAEAIWEMPPYTGWYQGAQAIVTLI
MMAR_0426|M.marinum_M               EAQDLLTRYITAFEAYDIDRLVEIFTAEAIWEMPPYAGWYQGARDIITLI
MUL_1076|M.ulcerans_Agy99           EAQDLLTRYIAAFEAHDIDRLVEIFTAEAIWEMPPYAGWYQGARDIITLI
MAV_4998|M.avium_104                ETQDLLARYIAAFESYDIDRLVELFTAEAIWEMPPYTGWYQGARTIVTLI
MAB_4553|M.abscessus_ATCC_1997      MLREQLRQYINAFERYDVEAIAKMFTTEAIWEMPPFTGWYQGGPSIAALI
TH_0604|M.thermoresistible__bu      EAQELLTRYIDAFESYDIDKLVELFTADAVWEMPPFDGWYQGPQNIVTLS
MSMEG_0219|M.smegmatis_MC2_155      QAQATLDRYIAAFEAYDIDKLVELFTEEAIWEMPPFDSWYQGPQAIGDLS
Mflv_0519|M.gilvum_PYR-GCK          QAAEALAKYIAAFEDYDMDRLVELFTADAVWEMPPFDGWYSGPADIIALS
Mvan_0149|M.vanbaalenii_PYR-1       EAAELLDKYIAAFEDYDMDRLVELFTDDAVWEMPPFDGWYQGPANIVTLS
MLBr_01076|M.leprae_Br4923          NPEQIYH-----------DSRLGPDLQAALDSLPPEFRAAVVLCDIEGLS
                                                      :         *: .:**          *  * 

Mb0188c|M.bovis_AF2122/97           HQQCPAYSPGDMRLISLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDMAA
Rv0182c|M.tuberculosis_H37Rv        HQQCPAYSPGDMRLISLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDMAA
MMAR_0426|M.marinum_M               HQQCPAECPGDMRLIPLVAN-GQPAAAMYMRAGE--THVPFQLHVLDMVD
MUL_1076|M.ulcerans_Agy99           HQQCPAECPGDMRLIPLVAN-GQPAAAMYMRAGE--TRVPFLLHVLDMVE
MAV_4998|M.avium_104                HQQCPAEGAGDMRLLPLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDVRG
MAB_4553|M.abscessus_ATCC_1997      KEQCPAEHAGDMRLVETSAN-GQPAIGLYMREGDG-VHRPFQMHVLDVTQ
TH_0604|M.thermoresistible__bu      KTHCPAERPGDMRLIPTTAN-GQPAGAMYLRNPETGTHEAFQMHVLAIGP
MSMEG_0219|M.smegmatis_MC2_155      RYKCPAEEPGDMRFLQTTAN-GQPAAAMYMLNRETGRHEAFQLHVLDITA
Mflv_0519|M.gilvum_PYR-GCK          KYHCPAAGAGDMRFLRTTAN-GQPVAALYMRNPETNVHEAFQLHVLDLRT
Mvan_0149|M.vanbaalenii_PYR-1       KVQCPAEKAGDMRFLRTTAN-GQPVAALYMRNPETGVHEAFQLHVLDAGK
MLBr_01076|M.leprae_Br4923          YEEIGATLGVKLGTVRSRIHRGRQALRDYL----------LTAHPRDGAT
                                      .  *    .:  :    : *: .   *:          :  *      

Mb0188c|M.bovis_AF2122/97           DRVSHVVAFLDTTLFPKFGLPDSL---------
Rv0182c|M.tuberculosis_H37Rv        DRVSHVVAFLDTTLFPKFGLPDSL---------
MMAR_0426|M.marinum_M               GRVSHVTAFLDGSLFPKFGLPASI---------
MUL_1076|M.ulcerans_Agy99           GRVSHVTAFLDGSLFPKFGLPASI---------
MAV_4998|M.avium_104                DRVSHVVAFLDDSLFAKFGLPAALGPRQEGVRA
MAB_4553|M.abscessus_ATCC_1997      DGVAHVVCFFDISLFEKFGLPAELTD-------
TH_0604|M.thermoresistible__bu      GGISHVVAFHMP-SFAPFGLPDSL---------
MSMEG_0219|M.smegmatis_MC2_155      DGISHVVAFMGEGLFKKFGLPETL---------
Mflv_0519|M.gilvum_PYR-GCK          RGIAHVVAFMDVSLFRKFGLPETL---------
Mvan_0149|M.vanbaalenii_PYR-1       AGITHVVAFKENDLFARFGLPDTL---------
MLBr_01076|M.leprae_Br4923          TDATHVKSA------------------------
                                       :** .

species	id	gene	e-value	identity (len)	annotation
M. thermoresistible (build 8)	TH_0604	sigG	-	100% (336)	PROBABLE ALTERNATIVE RNA POLYMERASE SIGMA FACTOR SIGG (RNA POLYMERASE ECF TYPE SIGMA FACTOR)
M. thermoresistible (build 8)	TH_1142	-	3e-17	25.71% (315)	RNA polymerase sigma factor, sigma-70 family protein
M. thermoresistible (build 8)	TH_1144	-	1e-16	28.84% (319)	RNA polymerase sigma factor, sigma-70 family protein