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aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0604 | sigG | - | 100% (336) | PROBABLE ALTERNATIVE RNA POLYMERASE SIGMA FACTOR SIGG (RNA POLYMERASE ECF TYPE SIGMA FACTOR) |
M. thermoresistible (build 8) | TH_1142 | - | 3e-17 | 25.71% (315) | RNA polymerase sigma factor, sigma-70 family protein |
M. thermoresistible (build 8) | TH_1144 | - | 1e-16 | 28.84% (319) | RNA polymerase sigma factor, sigma-70 family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0188c | sigG | 1e-124 | 66.57% (344) | RNA polymerase factor sigma-70 |
M. gilvum PYR-GCK | Mflv_0519 | - | 1e-138 | 70.29% (340) | RNA polymerase factor sigma-70 |
M. tuberculosis H37Rv | Rv0182c | sigG | 1e-124 | 66.57% (344) | RNA polymerase factor sigma-70 |
M. leprae Br4923 | MLBr_01076 | sigE | 3e-11 | 30.13% (156) | RNA polymerase sigma factor SigE |
M. abscessus ATCC 19977 | MAB_4553 | - | 1e-121 | 65.29% (314) | RNA polymerase factor sigma-70 |
M. marinum M | MMAR_0426 | sigG | 1e-128 | 71.92% (317) | alternative RNA polymerase sigma factor SigG |
M. avium 104 | MAV_4998 | - | 1e-126 | 71.79% (319) | RNA polymerase factor sigma-70 |
M. smegmatis MC2 155 | MSMEG_0219 | - | 1e-137 | 71.47% (340) | RNA polymerase factor sigma-70 |
M. ulcerans Agy99 | MUL_1076 | sigG | 1e-126 | 66.11% (357) | RNA polymerase factor sigma-70 |
M. vanbaalenii PYR-1 | Mvan_0149 | - | 1e-141 | 72.35% (340) | RNA polymerase factor sigma-70 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0188c|M.bovis_AF2122/97 MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAENSGREP Rv0182c|M.tuberculosis_H37Rv MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAENSGREP MMAR_0426|M.marinum_M -----------------------MSALAGNSTQNSIANFTAPTAERERPA MUL_1076|M.ulcerans_Agy99 -------------MSATLRRLIDVSALAGNSTQNSIANFTAPTAERERPA MAV_4998|M.avium_104 ------------------------------------------------MV MAB_4553|M.abscessus_ATCC_1997 --------------------------------------------MTAHAI TH_0604|M.thermoresistible__bu ----------------------------MSVMLRTLLHVTVLTAPPDGGS MSMEG_0219|M.smegmatis_MC2_155 ----------------------------MSVILRKLTTVTVLAHKLDDDS Mflv_0519|M.gilvum_PYR-GCK ----------------------------MSHPMRKLLFVTVLA--LDEGG Mvan_0149|M.vanbaalenii_PYR-1 ----------------------------MSQPVRKLHFVTVTA--LDDSS MLBr_01076|M.leprae_Br4923 ---------------------------------------------MGDGI Mb0188c|M.bovis_AF2122/97 ADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEG Rv0182c|M.tuberculosis_H37Rv ADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEG MMAR_0426|M.marinum_M GD----EFAVHAEPYRRELLAHCYRMTGSVHDAEDLVQETLLRAWKSYHR MUL_1076|M.ulcerans_Agy99 GD----EFAVHAEPYRRELLAHCYRMTGSVHDAEDLVQETLLRAWKSYHR MAV_4998|M.avium_104 GA----DFTAHAEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYDR MAB_4553|M.abscessus_ATCC_1997 ED----EFLSHTEQYRREILAHCYRMTGSIHDAEDLVQETYLRGWKAYAR TH_0604|M.thermoresistible__bu -----DAFLADAEQYRRELLAHCYRMTGSLHDAEDLVQETFLRAWKSHHK MSMEG_0219|M.smegmatis_MC2_155 PA---DAFLAEAQTYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSYQG Mflv_0519|M.gilvum_PYR-GCK AK---DAFLADAQKYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSYDR Mvan_0149|M.vanbaalenii_PYR-1 AE---DAFLADAQRYRRELLAHCYRMTGSLHDAEDLVQETYLRAWKSFKG MLBr_01076|M.leprae_Br4923 GMEREGRWTGNTQCPLRVVPGDESPTLDGRASPEDLIITNLLSPTIMSHP : .:: * : .. .. ..***: . * Mb0188c|M.bovis_AF2122/97 FAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERR Rv0182c|M.tuberculosis_H37Rv FAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERR MMAR_0426|M.marinum_M FEGKSSLRTWLHRIATNTCLSALEGRQRRPLPTGLAASGSDPTAPLVERA MUL_1076|M.ulcerans_Agy99 FEGKSSLRTWLHRIATNTCMSALEGRQRRPLPTGLAASGSDPTAPLVERA MAV_4998|M.avium_104 FEGKSSVRTWLHRIATNTCLSALEGRQRRPLPVGLGAPSADPTAELVERR MAB_4553|M.abscessus_ATCC_1997 FEGKSSVRTWLYRIATNTCLTALEGKQRRPLPTGLGAPSADPLDELDERS TH_0604|M.thermoresistible__bu FEGKASVRTWLYKIATNACLTALDGRQRRPLPTGLGAPSSDPTDDIVARE MSMEG_0219|M.smegmatis_MC2_155 FQGRSSVRTWLYRIATNTCLTSLEGRSRRPLPSGLGTPSSAPTDQITEHH Mflv_0519|M.gilvum_PYR-GCK FEGKSSVRTWLYRIATNTCLTALDGRKRRPLPSGLGGPSADPYADLTERH Mvan_0149|M.vanbaalenii_PYR-1 FQGKSSVRTWLYRIATNTCLTALDGNKRRALPSGLGQPASDPAGELFVRP MLBr_01076|M.leprae_Br4923 PPSRD-----------DDWVEPFDALQGTAVFDATGDKATMPSWEELVRQ .: : : .::. .: . . .: * : Mb0188c|M.bovis_AF2122/97 EVSWLEPLPDV-TDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLL Rv0182c|M.tuberculosis_H37Rv EVSWLEPLPDV-TDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLL MMAR_0426|M.marinum_M EVPWLEPLPDL-MADPADPSVIVGSRESVRLAFVAALQHLSPRQRAVLLL MUL_1076|M.ulcerans_Agy99 EVPWLEPLPDL-MADPADPSVIVGSRESVRLAFVAALQHLSPRQRAVLLL MAV_4998|M.avium_104 EVPWLEPLPAL-SDDPADPSVIVGSRESVRLAFVAALQYLSPRQRAVLLL MAB_4553|M.abscessus_ATCC_1997 EIPWLEPLP----DDATDPASIVGARESVRLAFVAALQHLPAKQRAVLVL TH_0604|M.thermoresistible__bu EVPWLEPLP----DDAADPSTIVGSRESVRLAFVAALQHLPPRQRAVLLL MSMEG_0219|M.smegmatis_MC2_155 EVPWLEPLPDG--DDPADPSQIVGTRESVRLAFVAALQHLSPRQRAVLVM Mflv_0519|M.gilvum_PYR-GCK EIAWLEPIPDDPHEDPADPSVIAESRESVRLALIAALQHLSPRQRAVLVL Mvan_0149|M.vanbaalenii_PYR-1 EVTWLEPLPDAPREDPSDPSVIAESRESVRLAFIAALQHLPPRQRAVLVL MLBr_01076|M.leprae_Br4923 HAARVYWLAYRLSGNQHDAEDLT-------------------QETFIRVF . . : :. : *. :. :: : :: Mb0188c|M.bovis_AF2122/97 RDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQTVRPSAADRLSAPDSP Rv0182c|M.tuberculosis_H37Rv RDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQTVRPSAADRLSAPDSP MMAR_0426|M.marinum_M RDVLQWKAAEVAEAIGTTTVAVNSLLQRARAQLETAQPSADDGLVAPDSP MUL_1076|M.ulcerans_Agy99 RDVLQWKAAEVAQAIGTTTVAVNSLLQRARAQLETVQPSADDGLVAPDSP MAV_4998|M.avium_104 RDVLGWRAAEVAEAIGTTTAAVNSLLQRARAQLDAVGPSADDQPAQPDSA MAB_4553|M.abscessus_ATCC_1997 REVLQWKAQEVAEAIGSTTAAVNSLLQRARAQLHEVSP-HEETLLEPEDP TH_0604|M.thermoresistible__bu REVLQWRAAEVAEVLNTSTAAVNSLLQRARAQLDQVGPSEDDELVPPESP MSMEG_0219|M.smegmatis_MC2_155 REVLQWKASEVGEAIGASTAAVNSLLQRARAQLEAVGPNEDDKIEAPDSP Mflv_0519|M.gilvum_PYR-GCK REVLQWKAAEVGEVIGASTAAVNSLLQRARAQLDEVAPSRDDQPVSPESP Mvan_0149|M.vanbaalenii_PYR-1 REVLQWKAAEVGEAVGTSTAAVNSLLQRARAQLDEISPSRDDEPVPPESP MLBr_01076|M.leprae_Br4923 RSVQNYQPGTFEGWLHRITTNLFLDMVRRRARIRMDALPDDYDRVPADEP *.* ::. . : *. : : * *::: .:.. Mb0188c|M.bovis_AF2122/97 EAQDLLARYIAAFEAYDIDRLVELFTAEAIWEMPPYTGWYQGAQAIVTLI Rv0182c|M.tuberculosis_H37Rv EAQDLLARYIAAFEAYDIDRLVELFTAEAIWEMPPYTGWYQGAQAIVTLI MMAR_0426|M.marinum_M EAQDLLTRYITAFEAYDIDRLVEIFTAEAIWEMPPYAGWYQGARDIITLI MUL_1076|M.ulcerans_Agy99 EAQDLLTRYIAAFEAHDIDRLVEIFTAEAIWEMPPYAGWYQGARDIITLI MAV_4998|M.avium_104 ETQDLLARYIAAFESYDIDRLVELFTAEAIWEMPPYTGWYQGARTIVTLI MAB_4553|M.abscessus_ATCC_1997 MLREQLRQYINAFERYDVEAIAKMFTTEAIWEMPPFTGWYQGGPSIAALI TH_0604|M.thermoresistible__bu EAQELLTRYIDAFESYDIDKLVELFTADAVWEMPPFDGWYQGPQNIVTLS MSMEG_0219|M.smegmatis_MC2_155 QAQATLDRYIAAFEAYDIDKLVELFTEEAIWEMPPFDSWYQGPQAIGDLS Mflv_0519|M.gilvum_PYR-GCK QAAEALAKYIAAFEDYDMDRLVELFTADAVWEMPPFDGWYSGPADIIALS Mvan_0149|M.vanbaalenii_PYR-1 EAAELLDKYIAAFEDYDMDRLVELFTDDAVWEMPPFDGWYQGPANIVTLS MLBr_01076|M.leprae_Br4923 NPEQIYH-----------DSRLGPDLQAALDSLPPEFRAAVVLCDIEGLS : *: .:** * * Mb0188c|M.bovis_AF2122/97 HQQCPAYSPGDMRLISLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDMAA Rv0182c|M.tuberculosis_H37Rv HQQCPAYSPGDMRLISLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDMAA MMAR_0426|M.marinum_M HQQCPAECPGDMRLIPLVAN-GQPAAAMYMRAGE--THVPFQLHVLDMVD MUL_1076|M.ulcerans_Agy99 HQQCPAECPGDMRLIPLVAN-GQPAAAMYMRAGE--TRVPFLLHVLDMVE MAV_4998|M.avium_104 HQQCPAEGAGDMRLLPLIAN-GQPAAAMYMRAGD--VHLPFQLHVLDVRG MAB_4553|M.abscessus_ATCC_1997 KEQCPAEHAGDMRLVETSAN-GQPAIGLYMREGDG-VHRPFQMHVLDVTQ TH_0604|M.thermoresistible__bu KTHCPAERPGDMRLIPTTAN-GQPAGAMYLRNPETGTHEAFQMHVLAIGP MSMEG_0219|M.smegmatis_MC2_155 RYKCPAEEPGDMRFLQTTAN-GQPAAAMYMLNRETGRHEAFQLHVLDITA Mflv_0519|M.gilvum_PYR-GCK KYHCPAAGAGDMRFLRTTAN-GQPVAALYMRNPETNVHEAFQLHVLDLRT Mvan_0149|M.vanbaalenii_PYR-1 KVQCPAEKAGDMRFLRTTAN-GQPVAALYMRNPETGVHEAFQLHVLDAGK MLBr_01076|M.leprae_Br4923 YEEIGATLGVKLGTVRSRIHRGRQALRDYL----------LTAHPRDGAT . * .: : : *: . *: : * Mb0188c|M.bovis_AF2122/97 DRVSHVVAFLDTTLFPKFGLPDSL--------- Rv0182c|M.tuberculosis_H37Rv DRVSHVVAFLDTTLFPKFGLPDSL--------- MMAR_0426|M.marinum_M GRVSHVTAFLDGSLFPKFGLPASI--------- MUL_1076|M.ulcerans_Agy99 GRVSHVTAFLDGSLFPKFGLPASI--------- MAV_4998|M.avium_104 DRVSHVVAFLDDSLFAKFGLPAALGPRQEGVRA MAB_4553|M.abscessus_ATCC_1997 DGVAHVVCFFDISLFEKFGLPAELTD------- TH_0604|M.thermoresistible__bu GGISHVVAFHMP-SFAPFGLPDSL--------- MSMEG_0219|M.smegmatis_MC2_155 DGISHVVAFMGEGLFKKFGLPETL--------- Mflv_0519|M.gilvum_PYR-GCK RGIAHVVAFMDVSLFRKFGLPETL--------- Mvan_0149|M.vanbaalenii_PYR-1 AGITHVVAFKENDLFARFGLPDTL--------- MLBr_01076|M.leprae_Br4923 TDATHVKSA------------------------ :** .