For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0784 | - | - | 100% (267) | short chain dehydrogenase |
| M. thermoresistible (build 8) | TH_3914 | - | 4e-15 | 25.87% (259) | PUTATIVE 3-alpha-hydroxysteroid dehydrogenase |
| M. thermoresistible (build 8) | TH_3912 | - | 9e-13 | 27.86% (262) | PUTATIVE short-chain dehydrogenase/reductase SDR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1963c | - | 6e-12 | 27.39% (241) | short chain dehydrogenase |
| M. gilvum PYR-GCK | Mflv_1024 | - | 1e-110 | 76.14% (264) | short-chain dehydrogenase/reductase SDR |
| M. tuberculosis H37Rv | Rv1928c | - | 6e-12 | 27.39% (241) | short chain dehydrogenase |
| M. leprae Br4923 | MLBr_01807 | fabG1 | 4e-10 | 25.94% (212) | 3-oxoacyl- |
| M. abscessus ATCC 19977 | MAB_0691 | - | 2e-29 | 34.36% (259) | short chain dehydrogenase |
| M. marinum M | MMAR_0243 | - | 6e-27 | 31.82% (264) | short-chain type dehydrogenase/reductase |
| M. avium 104 | MAV_5240 | - | 1e-109 | 74.90% (263) | short chain dehydrogenase |
| M. smegmatis MC2 155 | MSMEG_6662 | - | 1e-111 | 74.81% (266) | short chain dehydrogenase |
| M. ulcerans Agy99 | MUL_4870 | - | 1e-26 | 32.05% (259) | short chain dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_5812 | - | 1e-108 | 74.14% (263) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_5240|M.avium_104 ------------MSVITGGAGGMG----VATAKV-VGRDHTLVLCDVRQD
Mvan_5812|M.vanbaalenii_PYR-1 ---------MTAVSLITGGAGGMG----LATAKV-VGQDRAVVLCDVRQD
MSMEG_6662|M.smegmatis_MC2_155 ---------MRTVSVITGGAGGMG----VATAKI-VGKEHAVVLCDVRQD
TH_0784|M.thermoresistible__bu ----------------------MG----QATARV-VGREHAVVLCDVRQD
Mflv_1024|M.gilvum_PYR-GCK ---------MSAVSLITGGAGGMG----LATAKV-VGRDHSVVLCDVRQE
MMAR_0243|M.marinum_M ---------MSRDVLTVIGVGGMG----QAIARR-LGSGKTVLLADNNAD
MUL_4870|M.ulcerans_Agy99 ---------MSRNVLTVIGVGGMG----QAIARR-LGSGKTVVLADNNAD
MAB_0691|M.abscessus_ATCC_1997 ---------MPDEVVVVIGVGGMG----RVIARR-QGIGKALLLADHNEQ
Mb1963c|M.bovis_AF2122/97 MSVLDLFDLHGKRALITGASTGIG----KRVALAYVEAGAQVAIAARHLD
Rv1928c|M.tuberculosis_H37Rv MSVLDLFDLHGKRALITGASTGIG----KRVALAYVEAGAQVAIAARHLD
MLBr_01807|M.leprae_Br4923 ---------MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRL
* : : :. .
MAV_5240|M.avium_104 RLTAATAALAELGMTPT----AVNCDVTDRRAVAQLFDTAAGLGTVVSVI
Mvan_5812|M.vanbaalenii_PYR-1 RLDGAAAALKDLGVAVT----AVNCDVTDRRAVDALFETVSRLGTLVSVI
MSMEG_6662|M.smegmatis_MC2_155 RLDTAATALAEVGITPT----VVKCDVTDRHAVNRLFATTAGLGTLASVI
TH_0784|M.thermoresistible__bu RLDTAAAVLRDDGITAT----PVHCDVTDPQAVDRLFKETAGIGELASVI
Mflv_1024|M.gilvum_PYR-GCK RLDAAAAELAGLGISAT----TVHCDVTDRDAVGRLFDGAAVAGTLASVI
MMAR_0243|M.marinum_M TLASVSETLAAEGHDVK----SRGVDVCAAESVHDLAQYAATLGAVTQLA
MUL_4870|M.ulcerans_Agy99 TLASVAESLAAEGHDVR----SRGVDVCAAESVHDLAQYAATLGAVTQLA
MAB_0691|M.abscessus_ATCC_1997 ALQAVVDELKADGHNVI----GQRVDVSSRASVSGLAQAAAGLGRVAQVA
Mb1963c|M.bovis_AF2122/97 ALEKLADEIGTSGGKVV----PVCCDVSQHQQVTSMLDQVT--------A
Rv1928c|M.tuberculosis_H37Rv ALEKLADEIGTSGGKVV----PVCCDVSQHQQVTSMLDQVT--------A
MLBr_01807|M.leprae_Br4923 VADGHRVAVTHRASVVPDWFFGVECDVTDNDAIGAAFKAVE--------E
: . ** : .
MAV_5240|M.avium_104 HTAGVSPSMGPADYVMRTNAIGTLNVNEAFYAVAGDGSVIVNVASMAAHM
Mvan_5812|M.vanbaalenii_PYR-1 HTAGVSPSMGDAEYVMRTNALGTLNVDEAFYGAATDGAAIVNVASMAAYL
MSMEG_6662|M.smegmatis_MC2_155 HTAGVSPSMGDAEYVIRTNAIGTATINEAFYAAAPRGSAIVNVASMAAHL
TH_0784|M.thermoresistible__bu HTAGVSPSMGSAEYVMRTNAVGTVHVNEAFLRTAGAGAAIVNVASMAAHM
Mflv_1024|M.gilvum_PYR-GCK HTAGVSPSMGDAEYVMRTNALGTVNVGEQFFARAGEGAALVNVASMAAHI
MMAR_0243|M.marinum_M HTAGLSPAQASAQAILAVDLLGVALVLQEFGAVIAPGGAGVIIASMAGHL
MUL_4870|M.ulcerans_Agy99 HTAGLSPTQASAQAILAVDLVAVALVLQEFGAVIAPGGAGVIIASMAGHL
MAB_0691|M.abscessus_ATCC_1997 HTAGLSPAQSPTAAILAVDLVGVALVVEEFGKIVASGGAGVVIASMAGHM
Mb1963c|M.bovis_AF2122/97 ELGGIDIAVCNAGIITVTPMLDMP--LEEFQRLQNTNVTGVFLTAQAAAK
Rv1928c|M.tuberculosis_H37Rv ELGGIDIAVCNAGIITVTPMLDMP--LEEFQRLQNTNVTGVFLTAQAAAK
MLBr_01807|M.leprae_Br4923 HQGPVEVLVANAG--ITSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASR
. . :. : : : * . . * .: .
MAV_5240|M.avium_104 LPAEIVPTAQFPLALSDADAFMDAMLAACEIAPEQARSGLAYAVSKSFVK
Mvan_5812|M.vanbaalenii_PYR-1 LPAELIPTSAFPLALQDTEAFMTEMLAACAIAPEEARSGISYAISKSFVR
MSMEG_6662|M.smegmatis_MC2_155 LPEEMIPTGLFPQAMQAPEVFLKDMLAACEIVPEEARSGIAYALSKSFVR
TH_0784|M.thermoresistible__bu LPAEMVRTNLFARALTDLDGFLSEMLATCDAFPEEGRSGIAYALSKSFVK
Mflv_1024|M.gilvum_PYR-GCK LPAELIPTAVFPAALQDPDTFMAEMLTACEIAPEEARSGIAYALSKSFVR
MMAR_0243|M.marinum_M LPPPSAEQ------ERELAHRPPGQLLELDFVGSIVEPAFAYPFAKQANS
MUL_4870|M.ulcerans_Agy99 LPPPSAEQ------EHDLAHRPPGQLLELDFVGSIVEPAFAYPFAKQANS
MAB_0691|M.abscessus_ATCC_1997 PYELTAEQ------EQELGTTHAEDLLSLPYVRDIEHPAVAYQVSKRANH
Mb1963c|M.bovis_AF2122/97 AMVK-----------QGQGGVIINTASMSGHIINVPQQVSHYCASKAAVI
Rv1928c|M.tuberculosis_H37Rv AMVK-----------QGQGGVIINTASMSGHIINVPQQVSHYCASKAAVI
MLBr_01807|M.leprae_Br4923 NMIKQRFG----------RYIFMGSVVGLSGVPGQAN----YAASKSGLI
. * :*
MAV_5240|M.avium_104 WYSQSQAERFNARGLRIVSVSPGSIDTEMGRLEENAGAG----AMVADAA
Mvan_5812|M.vanbaalenii_PYR-1 WYSSSQAERFNGRGLRIVSVSPGSVDTEMGRLEEQAGAG----AMVADAA
MSMEG_6662|M.smegmatis_MC2_155 WYSSSQAERFTGRGLRIVSVSPGSVDTEMGRLEEKAGAG----ALVADAA
TH_0784|M.thermoresistible__bu WYSAAQAERFNARGLRIVSVSPGSIDTEMGRLEEQAGAG----AMVADAA
Mflv_1024|M.gilvum_PYR-GCK WYSVAQAERFNGKGLRILSVSPGSIDTEMGRLEEQAGAG----AMVADAA
MMAR_0243|M.marinum_M IRVRAASRQWGQREARVNSISPGIISTPMGQQELASPVGDGMRAMIAMSG
MUL_4870|M.ulcerans_Agy99 IRVRAASRQWGQREARVNSISPDIISTPMGQQELASPVGDGMRAMIAMSG
MAB_0691|M.abscessus_ATCC_1997 IRVRFAARQWGTRGARINSISPGVVSTPMGHQELASETGAITKAMVDGSA
Mb1963c|M.bovis_AF2122/97 HLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPL-----WEPKIP
Rv1928c|M.tuberculosis_H37Rv HLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPL-----WEPKIP
MLBr_01807|M.leprae_Br4923 GMARSLARELGSRSITANVVAPGFIDTEMTRAMDSKYQE----AALQAIP
: . : ::*. : * : .
MAV_5240|M.avium_104 VPRWGKPEEMAELLAFCASDKAGYLTGTDILNDGGVIASMTERARVTAAG
Mvan_5812|M.vanbaalenii_PYR-1 VPRWGKPEEMAELLAFCAGDKAGYLTGTDILNDGGVVASMTERARLAAAS
MSMEG_6662|M.smegmatis_MC2_155 VPRWGTPEEMAELFAFCASDRAGYLTGTDILNDGGVVASMRERARVAAEQ
TH_0784|M.thermoresistible__bu VPRWGTPEEMAELLAFCASAKASYLTGTDILNDGGVIASMTERARAAAET
Mflv_1024|M.gilvum_PYR-GCK VPRWGTAEEMADLLAFCASRKAGYLTGTDILNDGGVIASMTERTRLASQ-
MMAR_0243|M.marinum_M TGRIGTPDDIAAAAAFLLGPEATFITGADLLVDGGVVAAIRASR------
MUL_4870|M.ulcerans_Agy99 TGRIGTPDDIAAAAAFLLGPEATFITGADLLVDGGVVAAIRANG------
MAB_0691|M.abscessus_ATCC_1997 SRRIGTSDDIAAAAAFLLGPESSYVTGTDLLVDGGVIAAVRSGQLFN---
Mb1963c|M.bovis_AF2122/97 LGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYTCP-----------
Rv1928c|M.tuberculosis_H37Rv LGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYTCP-----------
MLBr_01807|M.leprae_Br4923 LGRIGAVEEIAGAVSFLASEDAGYISGAVIPVDGGLGMGH----------
* * :::* : . : :::*: : ***
MAV_5240|M.avium_104 ---
Mvan_5812|M.vanbaalenii_PYR-1 SS-
MSMEG_6662|M.smegmatis_MC2_155 QQQ
TH_0784|M.thermoresistible__bu Q--
Mflv_1024|M.gilvum_PYR-GCK ---
MMAR_0243|M.marinum_M ---
MUL_4870|M.ulcerans_Agy99 ---
MAB_0691|M.abscessus_ATCC_1997 ---
Mb1963c|M.bovis_AF2122/97 ---
Rv1928c|M.tuberculosis_H37Rv ---
MLBr_01807|M.leprae_Br4923 ---