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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0409 | - | - | 100% (217) | transcriptional regulator, TetR family protein |
| M. thermoresistible (build 8) | TH_2910 | - | 6e-39 | 46.70% (197) | PUTATIVE transcriptional regulator, TetR family |
| M. thermoresistible (build 8) | TH_1099 | - | 1e-08 | 34.18% (79) | RemM protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1199c | - | 2e-10 | 28.57% (210) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_5054 | - | 2e-71 | 66.83% (199) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv1167c | - | 3e-10 | 28.57% (210) | transcriptional regulatory protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1638 | - | 1e-06 | 28.32% (113) | TetR family transcriptional regulator |
| M. marinum M | MMAR_4834 | - | 1e-39 | 44.72% (199) | TetR family transcriptional regulator |
| M. avium 104 | MAV_4473 | - | 3e-61 | 65.22% (184) | hypothetical protein MAV_4473 |
| M. smegmatis MC2 155 | MSMEG_1430 | - | 4e-68 | 60.19% (216) | transcriptional regulator, TetR family protein |
| M. ulcerans Agy99 | MUL_1934 | - | 2e-07 | 36.99% (73) | regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_0323 | - | 3e-39 | 45.69% (197) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
TH_0409|M.thermoresistible__bu ----------MAAATSDPRPARS---RARLLEAATTLLRTGGPSAVTIDA
Mflv_5054|M.gilvum_PYR-GCK ----------MAAVSSDPRPARS---RARLLDAATALLRSGGPSAVTIDA
MAV_4473|M.avium_104 ---------------------------------------------MTVDA
MSMEG_1430|M.smegmatis_MC2_155 ----------MTPGSNDPRPARS---RARLLEAATVLLRSGGPSAVTVDA
MMAR_4834|M.marinum_M MERDTLEFPVDDDDDVDPRRLRS---RTRLLDAATKLLSAGGIEAVTIDA
Mvan_0323|M.vanbaalenii_PYR-1 MS-DSQSVPVPDDD-VDPRRIRS---RTRLLDAAATLLSTGGVEAVTIDA
Mb1199c|M.bovis_AF2122/97 -------MTVSAPAKANPYRRRGEVLERALYDATLAELESAGYGGLTMEG
Rv1167c|M.tuberculosis_H37Rv -------MTVSAPAKANPYRRRGEVLERALYDATLAELESAGYGGLTMEG
MUL_1934|M.ulcerans_Agy99 --MGAMTQTADRSAQVSPWSPRE----AELLAVTLQLLQEHGYDRLTIDA
MAB_1638|M.abscessus_ATCC_1997 -MVTKQATGLYGGRTADERRAER---RRRLLEAGLEVMASSGWAATTVRE
*:
TH_0409|M.thermoresistible__bu VTKSANVARATLYRHFAGANDLLAAAFTSLLEPAP------MPPAEGSLR
Mflv_5054|M.gilvum_PYR-GCK VTRKANVARATLYRHFPSANDLVAAAFVGLIPPPP------MPPSTGSLR
MAV_4473|M.avium_104 VTRTANVARATLYRHFPSGNDLLAAAFNSLIPASP------TPPAEGSLR
MSMEG_1430|M.smegmatis_MC2_155 VTRAANVARATLYRHFPSGNDLLAAAFRQLIPAAP------TPPQEGTLR
MMAR_4834|M.marinum_M VTKASKVARTTLYRHFSSSTQLLAATFERLLPQVH------PPPATGSMR
Mvan_0323|M.vanbaalenii_PYR-1 VTKASKVARTTLYRHFHSSSHLLAATFERLLPQVTT-----PAPTSGPLR
Mb1199c|M.bovis_AF2122/97 IAARAQTGKAALYRRWAGKRELVLAAVQYALPPVP------EPRADRSAR
Rv1167c|M.tuberculosis_H37Rv IAARAQTGKAALYRRWAGKRELVLAAVQYALPPVP------EPRADRSAR
MUL_1934|M.ulcerans_Agy99 VANTARASKATVYRRWPSKAELVLAAFIEGVRQVA------VAPNTGSLR
MAB_1638|M.abscessus_ATCC_1997 ICKTAGLNTRYFYECFDGLDELLVAVFDWIIEDSIATAGSAMAAADKDSR
: : .*. : . .*: *.. : . *
TH_0409|M.thermoresistible__bu DRLLAVVLGWAETIAEAPTMLTAMTWMASGPDVGPYPDARETDSDAVGTL
Mflv_5054|M.gilvum_PYR-GCK ERLLAIVVEWAESIAEAPTTLTAMAWLSLGPDIEQVPSAGGSQ---VGSL
MAV_4473|M.avium_104 DRLVAVVLAQAEAVAQAPTMMTAMTWLALGRDLEAWPQPRADDSVAITTL
MSMEG_1430|M.smegmatis_MC2_155 DRLIALVSAQAELIAEAPVTVTAMSWLALGADMEHLPLS---ASPEVLSL
MMAR_4834|M.marinum_M DQLIELLSRQATLFQEAPLHVTTLAWVALGPTPDGTQETQDRH-----AL
Mvan_0323|M.vanbaalenii_PYR-1 EQLIELLSRQAALFNDAPLHVTTLAWLSLGPTGS-NNEADDRHT--SGAL
Mb1199c|M.bovis_AF2122/97 ENLLAVFTANCEILAGK----TALPSMEIVSQLLHEPELRAIFINSVWAP
Rv1167c|M.tuberculosis_H37Rv ENLLAVFTANCEILAGK----TALPSMEIVSQLLHEPELRAIFINSVWAP
MUL_1934|M.ulcerans_Agy99 DDLVKIGEGICGQAHQQ-----ASTIRAVLVEVSRHPALSD-------AL
MAB_1638|M.abscessus_ATCC_1997 SQVHAGVVGAVTALTADPRRARVIATEAMGSQRLTRRRMRLTHY---MAL
. : . . :
TH_0409|M.thermoresistible__bu RSRIVQLYSVPFDAILDSPQAAEELDEVDRIQTIALLIGPLILGKLSTVA
Mflv_5054|M.gilvum_PYR-GCK RERIAEQYSAPFDAVFDSPDAAAELRPVDRTMAFALLIGPLAFGRISTLT
MAV_4473|M.avium_104 RERIAQQYSEPFDVIFDSPEA-AELGEVDRSRAIALLIGPLVLGRLSTLP
MSMEG_1430|M.smegmatis_MC2_155 RERVAEQYAAPFEAIFTSPEAREELGDVDRAQAAALLLGPIVLGKLSTLP
MMAR_4834|M.marinum_M RARIIDQYRQPFVALLQSPEARADLDDFDMELILCQLIGPVAFARLTGLR
Mvan_0323|M.vanbaalenii_PYR-1 RARVVDQYRQPFDAILTSPKAQAELDDFDRELALCQLVGPLAFARMTGIR
Mb1199c|M.bovis_AF2122/97 RLRIVES-------ILQAGVRSGEIDPATLTPMTARIGPALIHQHVLFTG
Rv1167c|M.tuberculosis_H37Rv RLRIVES-------ILQAGVRSGEIDPATLTPMTARIGPALIHQHVLFTG
MUL_1934|M.ulcerans_Agy99 QRQFVDQRKALIQQVLQQAVDRGEITQAAITDELWDLLPGYLIFRSIIPN
MAB_1638|M.abscessus_ATCC_1997 MLGAARAEFDPEADPNYTAVQAEALAAGVAGTVLAWLDGRLRLEREE-LA
: : :
TH_0409|M.thermoresistible__bu DFDYRRCAEAAVDGFLATHAKKREITSASTESGGA---------
Mflv_5054|M.gilvum_PYR-GCK EFDYRAVAIAAVDGFLSTFS------ATNTGREGA---------
MAV_4473|M.avium_104 DFDYRECALAAVDGFLHVQS--ARARAARVESAGA---------
MSMEG_1430|M.smegmatis_MC2_155 EFDYATCVRSAVDGFLATHR--RTVSESSNESAGA---------
MMAR_4834|M.marinum_M AIDRQDCER-IVDDFLVAHRRQADKPAQRAVSRKPVSRRSGSD-
Mvan_0323|M.vanbaalenii_PYR-1 TITHNDCAN-IVDDFLTAHR-KTDSDAK--ESKIATSRRAAPRV
Mb1199c|M.bovis_AF2122/97 SPPDREQLTRIIDAMILTTG----------ERRES---------
Rv1167c|M.tuberculosis_H37Rv SPPDREQLTRIIDAMILTTG----------ERRES---------
MUL_1934|M.ulcerans_Agy99 RPPTPHTVQLLVDDFIMPGL---------TQATG----------
MAB_1638|M.abscessus_ATCC_1997 EYTAQFVDQAMFTPLPVHNS---------VEH------------
. :