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M. vanbaalenii PYR-1 Mvan_5573 (-)

annotation: short chain dehydrogenase
coordinates: 5953256 - 5954035
length: 259

MFNSLQGRSAIVTGGSKGIGRGIAETFARAGVNVVITGRTQADIDGTVAGLAGLPGTVTGVAADVTSPED
CRRVVATATERNGGLDIVCANAGIFPSGRLQDLTPEDIEQVLGVNFKGTVYIVQAALDALTASGHGRVII
TSSITGPITGFPGWSHYGASKAAQMGFLRTAAIELAPKKITVNAVLPGNIITEGLVEMGQTYMDQMAASV
PAGKLGEVADIGNAALFFATDEASYITGQSLVVDGGQILPESPEALADL
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_5573--100% (259)short chain dehydrogenase
M. vanbaalenii PYR-1Mvan_1975fabG2e-3636.44% (247) 3-ketoacyl-(acyl-carrier-protein) reductase
M. vanbaalenii PYR-1Mvan_1616-3e-3235.74% (249) short-chain dehydrogenase/reductase SDR

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1385fabG5e-3735.34% (249) 3-ketoacyl-(acyl-carrier-protein) reductase
M. gilvum PYR-GCKMflv_1235-1e-13391.89% (259) short chain dehydrogenase
M. tuberculosis H37RvRv1350fabG5e-3735.34% (249) 3-ketoacyl-(acyl-carrier-protein) reductase
M. leprae Br4923MLBr_01807fabG14e-3232.22% (239) 3-oxoacyl-
M. abscessus ATCC 19977MAB_0952-4e-8962.45% (253) short chain dehydrogenase
M. marinum MMMAR_0587-3e-3939.27% (247) short-chain type dehydrogenase/reductase
M. avium 104MAV_1572-1e-3736.33% (245) short chain dehydrogenase
M. smegmatis MC2 155MSMEG_0269-1e-11981.08% (259) short chain dehydrogenase
M. thermoresistible (build 8)TH_3693-1e-3535.10% (245) PUTATIVE short-chain dehydrogenase/reductase SDR
M. ulcerans Agy99MUL_3898fabG8e-3636.51% (241) 3-ketoacyl-(acyl-carrier-protein) reductase

CLUSTAL 2.0.9 multiple sequence alignment


Mb1385|M.bovis_AF2122/97            ------------MASLLNAR--------TAVITGGAQGLGLAIGQRFVAE
Rv1350|M.tuberculosis_H37Rv         ------------MASLLNAR--------TAVITGGAQGLGLAIGQRFVAE
MUL_3898|M.ulcerans_Agy99           ------------MCGAHRDRG-----YVYPVVTGGAQGLGLAIAERFVSE
MAV_1572|M.avium_104                -------------MSLLSGQ--------TAVITGGAQGLGFAIAERFVAE
TH_3693|M.thermoresistible__bu      -------------VSLLAGQ--------TAVVTGGARGLGYAIAERFIAE
MLBr_01807|M.leprae_Br4923          ------MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVAD
Mvan_5573|M.vanbaalenii_PYR-1       ------------MFNSLQGR--------SAIVTGGSKGIGRGIAETFARA
Mflv_1235|M.gilvum_PYR-GCK          ------------MFTSLQGR--------SAAVTGGSKGIGRGIAETFARA
MSMEG_0269|M.smegmatis_MC2_155      ------------MFTSLEGR--------SAIVTGGSKGIGRGIAETFANA
MAB_0952|M.abscessus_ATCC_1997      MVVESAEPAERKVMFDLSAR--------SVLVTGGTKGIGRGIATVFARA
MMAR_0587|M.marinum_M               -------------MGQLEGK--------TALVTGGNSGIGLAAAQRLAAE
                                                       :           :***  *:* . .  :   

Mb1385|M.bovis_AF2122/97            GARVVLGDVNLEATEVAAKRLGGD--DVALAVRCDVTQADDVDILIRTAV
Rv1350|M.tuberculosis_H37Rv         GARVVLGDVNLEATEVAAKRLGGD--DVALAVRCDVTQADDVDILIRTAV
MUL_3898|M.ulcerans_Agy99           GARVVLGDVNLEATEAAAKQLGGG--EVAVAVRCDVTKADEVETLLQAAL
MAV_1572|M.avium_104                GARVVLGDVNLEATQTAAKQLGGD--QVALAVRCDVTKSSEVETLIQTAV
TH_3693|M.thermoresistible__bu      GARVVIGDIDESATRAAADSLGGA--DVAVGMRCDVTRSDEVEALVGAAV
MLBr_01807|M.leprae_Br4923          GHRVAVTHR---ASVVPDWFFG---------VECDVTDNDAIGAAFKAVE
Mvan_5573|M.vanbaalenii_PYR-1       GVNVVITGRTQADIDGTVAGLAGL-PGTVTGVAADVTSPEDCRRVVATAT
Mflv_1235|M.gilvum_PYR-GCK          GINVVITARTQDDIDATVADLAGL-AGTVTGVAADVTSPEDCRRVVETAI
MSMEG_0269|M.smegmatis_MC2_155      GVDVVITGRNQDDLDRTVADLSGT-RGKVTAVRADVTDPEDARRTVAETV
MAB_0952|M.abscessus_ATCC_1997      GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV
MMAR_0587|M.marinum_M               GAHVFLTGRNQATIDAAVASIGSR----AHGIRADVSNIEDLARVADAIA
                                    *  * :              :.         :  **:             

Mb1385|M.bovis_AF2122/97            ERFGGLDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAI
Rv1350|M.tuberculosis_H37Rv         ERFGGLDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAI
MUL_3898|M.ulcerans_Agy99           ERFGGLDIMVNNAGITRDATMRKMTEEQFDQVIDVHLKGTWNGIRLAAAI
MAV_1572|M.avium_104                ERFGGLDIMVNNAGITRDATMRKMTEEQFDQVIAVHLKGTWNGTRLAAAI
TH_3693|M.thermoresistible__bu      KRFGSLDVMVNNAGITRDATMRKMTEQQFDEVIAVHLKGTWNGLRAAAAI
MLBr_01807|M.leprae_Br4923          EHQGPVEVLVANAGITSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRN
Mvan_5573|M.vanbaalenii_PYR-1       ERNGGLDIVCANAGIFPSGRLQDLTPEDIEQVLGVNFKGTVYIVQAALDA
Mflv_1235|M.gilvum_PYR-GCK          ERHGGLDIVCPNAGIFPSGRIADLTPDDIEQVLGVNFKGTVYIVQAALDA
MSMEG_0269|M.smegmatis_MC2_155      SRHGGLDIVCANAGIFPSGRLEDLTPDDIEQVLGVNFKGTVYIVQAALQA
MAB_0952|M.abscessus_ATCC_1997      DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAP
MMAR_0587|M.marinum_M               AAGRGLDVLFANAGGGEFVLLGDITIEHFTNGFMTNVAGTLFTVQTMLPL
                                         ::::  ***      :  :: :.: : : .:. *.    :     

Mb1385|M.bovis_AF2122/97            MRERKRGAIVNMSSVSG-KVGMVGQTNYSAAKAGIVGMTKAAAKELAHLG
Rv1350|M.tuberculosis_H37Rv         MRERKRGAIVNMSSVSG-KVGMVGQTNYSAAKAGIVGMTKAAAKELAHLG
MUL_3898|M.ulcerans_Agy99           MRENKRGAIVNMSSVSG-KVGMVGQTNYSAAKAGIVGMTKAAAKELAHVG
MAV_1572|M.avium_104                MRENKRGAIINMSSVSG-KVGMVGQTNYSAAKAGIVGMTKAAAKELAYLG
TH_3693|M.thermoresistible__bu      MREQKRGAIVNMSSISG-KVGMVGQTNYSAAKAGIVGMTKAASKELAYLG
MLBr_01807|M.leprae_Br4923          MIKQRFGRYIFMGSVVG-LSGVPGQANYAASKSGLIGMARSLARELGSRS
Mvan_5573|M.vanbaalenii_PYR-1       LTASGHGRVIITSSITGPITGFPGWSHYGASKAAQMGFLRTAAIELAPKK
Mflv_1235|M.gilvum_PYR-GCK          LTASGHGRVIITSSITGPITGFPGWSHYGASKAAQLGFLRTAAIELAPKK
MSMEG_0269|M.smegmatis_MC2_155      LTASGHGRVVVTSSITGPITGYPGWSHYGASKAAQLGFLRTAAMELAPKK
MAB_0952|M.abscessus_ATCC_1997      LTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRG
MMAR_0587|M.marinum_M               LNS---GASIVLTGSTAAYNGSPAFSVYAATKAAIRSFGRTWAAELVSRN
                                    :     *  :   .  .   *  . : *.*:*:.  .: :: : **    

Mb1385|M.bovis_AF2122/97            IRVNAIAPGLIRSAMTEAMP-----QRIWDQKLAEVPMGRAGEPSEVASV
Rv1350|M.tuberculosis_H37Rv         IRVNAIAPGLIRSAMTEAMP-----QRIWDQKLAEVPMGRAGEPSEVASV
MUL_3898|M.ulcerans_Agy99           VRVNAIAPGLIRSAMTEAMP-----QRIWDQKLAEVPMGRAGEPSEVASV
MAV_1572|M.avium_104                VRVNAIAPGLIRSAMTEAMP-----QRIWDSKVAEVPMGRAGEPSEVASV
TH_3693|M.thermoresistible__bu      VRVNAIQPGLIRSAMTEAMP-----QRIWDEKLAEIPMGRAGEPEEVAKV
MLBr_01807|M.leprae_Br4923          ITANVVAPGFIDTEMTRAMD-----SKYQEAALQAIPLGRIGAVEEIAGA
Mvan_5573|M.vanbaalenii_PYR-1       ITVNAVLPGNIITEGLVEMG-----QTYMDQMAASVPAGKLGEVADIGNA
Mflv_1235|M.gilvum_PYR-GCK          ITVNAVLPGNILTEGLVEMG-----QSYIDQMAAAVPAGKLGEVADIGNA
MSMEG_0269|M.smegmatis_MC2_155      ITINAVLPGNIMTEGLDEMG-----QDYLDQMASAIPAGRLGSVADIGNA
MAB_0952|M.abscessus_ATCC_1997      VTVNAILPGNILTEGLVDMG-----EEYISGMARSIPMGMLGSPVDIGHL
MMAR_0587|M.marinum_M               IRVNTVVPGPVETPGLKGLAPEGQEQQLLEGEAAKVPMGRLGKPAEIAAA
                                    :  *.: ** : :     :      .   .     :* *  *   ::.  

Mb1385|M.bovis_AF2122/97            AVFLASDLSSYMTGTVLDVTGGRFI----------
Rv1350|M.tuberculosis_H37Rv         AVFLASDLSSYMTGTVLDVTGGRFI----------
MUL_3898|M.ulcerans_Agy99           ALFLACDLSSYMTGTVLDVTGGRFI----------
MAV_1572|M.avium_104                ALFLASDMSSYMTGTVMEITGGRHL----------
TH_3693|M.thermoresistible__bu      ALFLASDLSSYMTGTVLEVTGGRHL----------
MLBr_01807|M.leprae_Br4923          VSFLASEDAGYISGAVIPVDGGLGMGH--------
Mvan_5573|M.vanbaalenii_PYR-1       ALFFATDEASYITGQSLVVDGGQILPESPEALADL
Mflv_1235|M.gilvum_PYR-GCK          ALFFATDEAAYITGQSLVVDGGQILPESPEALADL
MSMEG_0269|M.smegmatis_MC2_155      ALFFATDEAAYVTGQTLVVDGGQVLPESHLAIAEL
MAB_0952|M.abscessus_ATCC_1997      AAFLATDEAGYITGQAIVVDGGQVLPESPDAVNP-
MMAR_0587|M.marinum_M               VLFLASDQSSFMTGSEMFVDGG------TEQL---
                                    . *:* : :.:::*  : : **