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M. vanbaalenii PYR-1 Mvan_3008 (-)

annotation: helix-turn-helix domain-containing protein
coordinates: 3176693 - 3177142
length: 149

PGESVSAQRLRDLALLRRVKDRIDREYAQPLNVEALARGVNMSAGHLSRQFKSAYGESPYTYLMTRRIER
AMALLRRGDMSVTEVCFEVGCASLGTFSTRFTELVGVPPSVYRRDAAEVAPGIPSCVAKQVTRPIRNREA
PVSALPLA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_3008--100% (149)helix-turn-helix domain-containing protein
M. vanbaalenii PYR-1Mvan_3612-1e-2645.45% (121) helix-turn-helix domain-containing protein
M. vanbaalenii PYR-1Mvan_3996-2e-0931.07% (103) helix-turn-helix domain-containing protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1966c-6e-0530.38% (79) transcriptional regulatory protein
M. gilvum PYR-GCKMflv_2899-1e-2646.22% (119) helix-turn-helix domain-containing protein
M. tuberculosis H37RvRv1931c-7e-0530.38% (79) transcriptional regulatory protein
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_4709c-5e-5781.95% (133) AraC family transcriptional regulator
M. marinum MMMAR_1063-3e-1034.34% (99) transcriptional regulatory protein
M. avium 104MAV_4981-8e-0733.67% (98) transcriptional regulator, AraC family protein
M. smegmatis MC2 155MSMEG_0213-7e-6479.87% (149) transcriptional regulator
M. thermoresistible (build 8)TH_2340-1e-1242.70% (89) transcriptional regulatory protein
M. ulcerans Agy99MUL_0821-2e-1034.34% (99) transcriptional regulatory protein

CLUSTAL 2.0.9 multiple sequence alignment


Mvan_3008|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_0213|M.smegmatis_MC2_155      --------------------------------------------------
MAB_4709c|M.abscessus_ATCC_199      --------------------------------------------------
Mflv_2899|M.gilvum_PYR-GCK          --------------------------------------------------
MMAR_1063|M.marinum_M               ----------------MAQAARLIQHRSGVPIYGYRTDPDIPRVSVLRPG
MUL_0821|M.ulcerans_Agy99           ----------MDYLWRMAQAARLIQHRSGVPIYGYRTDPDIPRVSVRRPG
Mb1966c|M.bovis_AF2122/97           -----------------------------MVIVGFPGDPVDTVILPGGAG
Rv1931c|M.tuberculosis_H37Rv        -----------------------------MVIVGFPGDPVDTVILPGGAG
MAV_4981|M.avium_104                MADSSATPRVVVIVVFDDVTMLDVAGAGEVFAEANRFGADYLLKIASVDG
TH_2340|M.thermoresistible__bu      ------------------------VTVSALSARNLASSAKPPQIDLRRGG
                                                                                      

Mvan_3008|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_0213|M.smegmatis_MC2_155      --------------------------------------------------
MAB_4709c|M.abscessus_ATCC_199      --------------------------------------------------
Mflv_2899|M.gilvum_PYR-GCK          --------------------------------------------------
MMAR_1063|M.marinum_M               PEDLGDRARHIHDFPALWYVPAAGLVYIAAAGQVLEPTQFGSLQGGVAMF
MUL_0821|M.ulcerans_Agy99           PEDLGDRARHIHDFPALWYVPAAGLVYIAAAGQVLEPTQFGSLQAGVAMF
Mb1966c|M.bovis_AF2122/97           VDAARSEPALIDWVKAVSGTARRVVTVCTGAFLAAEAGLLGRTPSDDALG
Rv1931c|M.tuberculosis_H37Rv        VDAARSEPALIDWVKAVSGTARRVVTVCTGAFLAAEAGLLGRTPSDDALG
MAV_4981|M.avium_104                RDVTTSIGTRLGVTDAVSSIESADTVLVAGSDNLPRRPIDPELVEAVKSV
TH_2340|M.thermoresistible__bu      RALGGSYLYEGDKLQTGWHSHDVHQIEYAIGGVVEVQTRTGHYLLPPQQA
                                                                                      

Mvan_3008|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_0213|M.smegmatis_MC2_155      --------------------------------------------------
MAB_4709c|M.abscessus_ATCC_199      --------------------------------------------------
Mflv_2899|M.gilvum_PYR-GCK          --------------------------------------------------
MMAR_1063|M.marinum_M               FDPAALGGDGGSPWPSWRTHPLLFPFLHGHSGGILRLEVPAARRSTWDGA
MUL_0821|M.ulcerans_Agy99           FDPAALGGDGGSPWPSWRTHPLLFPFLHGHSGGILRLEVPAARRSTWDGA
Mb1966c|M.bovis_AF2122/97           LCRTFRPRISGRSGRCRPDLHAQFAEGVDRGWSHRRHRPRAG--------
Rv1931c|M.tuberculosis_H37Rv        LCRTFRPRISGRSGRCRPDLHAQFAEGVDRGWSHRRHRPRAG--------
MAV_4981|M.avium_104                ADRTRRLASICTGSFILGQAGLLDGRRATTHWHDVRLFARAFPEITVEPD
TH_2340|M.thermoresistible__bu      AWLPVGLEHSATMNPDVKTVAVMFDPQLVPDAGNRARILAVSPLIR----
                                                                                      

Mvan_3008|M.vanbaalenii_PYR-1       --------------------------------MPGESVS-----------
MSMEG_0213|M.smegmatis_MC2_155      --------------------------------MPGE--------------
MAB_4709c|M.abscessus_ATCC_199      ---------------------MLFGTNLGTVTSAGE--------------
Mflv_2899|M.gilvum_PYR-GCK          --------------------------------------------------
MMAR_1063|M.marinum_M               IAAIEAELTARQQGYGQAVAAHLTLLLIELARLARDVVG-----------
MUL_0821|M.ulcerans_Agy99           IAAIEAELTTRQQGYGQAVTAHLTLLLIELARLARDVVG-----------
Mb1966c|M.bovis_AF2122/97           ----TGRRRPRHRDCPDGCPLARPVSAPTRWADPVRGSG-----------
Rv1931c|M.tuberculosis_H37Rv        ----TGRRRPRHRDCPDGCPLARPVSAPTRWADPVRGSG-----------
MAV_4981|M.avium_104                ALFVCDGDVFTSAGISSGIDLALALVEMDYGTELVRAVARWLVVYLKRAG
TH_2340|M.thermoresistible__bu      EMMIYALRWPIDRPHGDEISDTFFRTLAHLVSEALDHEAP----------
                                                                                      

Mvan_3008|M.vanbaalenii_PYR-1       ---------AQRLRDLALLRRVKDRIDREYAQPLNVEALARGVNMSAGHL
MSMEG_0213|M.smegmatis_MC2_155      ---------EQRLRDLKLLRRVRDRIDREYAQPLNVEALARGVNMSAGHL
MAB_4709c|M.abscessus_ATCC_199      ---------EQRLRDLARLRRVRDRIDREYAQPLNVEALAREAQMSAGHL
Mflv_2899|M.gilvum_PYR-GCK          -------------------MRAKDLVDARYAEPITVDDLAAAAGLSRAHF
MMAR_1063|M.marinum_M               ---------DLRRSGEPLLAEVFEVIDRRHAEPLSLRDVAAEVGMTPGHL
MUL_0821|M.ulcerans_Agy99           ---------DLRRSGEPLLAEVFEVIDRRHAEPLSLRDVAAEVGMTPGHL
Mb1966c|M.bovis_AF2122/97           ---------VDATRQTDLDPPGAGGHRGRAGGAHRIGELAQRAAMSPRHF
Rv1931c|M.tuberculosis_H37Rv        ---------VDATRQTDLDPPGAGGHRGRAGGAHRIGELAQRAAMSPRHF
MAV_4981|M.avium_104                GQSQFSALVEAEPPPRSPLRKVTAAISADPAADHSVKSLSARASLSTRQL
TH_2340|M.thermoresistible__bu      ---------LSLPTSDHPIVAAAMAYTKEHLQSVTAEEVSRAVAVSERTL
                                                                          ::  . ::   :

Mvan_3008|M.vanbaalenii_PYR-1       SRQFKSAYGESPYTYLMTRRIERAMALLRRGDMSVTEVCFEVGCASLGTF
MSMEG_0213|M.smegmatis_MC2_155      SRQFKAAFGESPYSYLMTRRIERAMALLRRGDLSVTEVCFAVGCSSLGTF
MAB_4709c|M.abscessus_ATCC_199      SRQFKSAYGESPYSYLMTRRIERAMMLLRRGDMSVTDVCFAVGCSSLGTF
Mflv_2899|M.gilvum_PYR-GCK          SRMFTRTFGESPRAYLQTRRLERAASLLRHTDRSVADICVMVGLQSVGSF
MMAR_1063|M.marinum_M               TTIVRRRTGRTVQEWIIERRMAQARELLVATDLAVGEVARRVGISDPGYF
MUL_0821|M.ulcerans_Agy99           TTIVRRRTGRTVQEWIIERRMAQARELLVATDLAVGEVARRVGISDPGYF
Mb1966c|M.bovis_AF2122/97           TRVFSDEVGEAPGRYVERIRTEAARRQLEETHDTVVAIAARCGFGTAETM
Rv1931c|M.tuberculosis_H37Rv        TRVFSDEVGEAPGRYVERIRTEAARRQLEETHDTVVAIAARCGFGTAETM
MAV_4981|M.avium_104                TRLFQSELGTTPARYVEMVRIDAARAALDAG-RSVAESARLAGFGSAETL
TH_2340|M.thermoresistible__bu      RRQFRQATGISWRTYLLHARMLKAMALLAAPDQSVQETASAVGFDSLSAF
                                       .    * :   ::   *   *   *     :*   .   *      :

Mvan_3008|M.vanbaalenii_PYR-1       STRFTELVGVPPSVYRRDA--AEVAPGIPSCVAKQVTRPIRNREAPVSAL
MSMEG_0213|M.smegmatis_MC2_155      STRFTELVGLPPSTYRDRA--AAIQEGLPSCLEKYVTRPVRNREAPAVRL
MAB_4709c|M.abscessus_ATCC_199      STRFAELVGMSPRTYKERI--VDHA-GIPSCVVKQVTRPIRNREATPAVR
Mflv_2899|M.gilvum_PYR-GCK          TTSFARAYGLPPAAYRASMPSAAVHARIPSCILQRDTRPKADSRVKTAHG
MMAR_1063|M.marinum_M               SRLFSRAHGTSPRQWRALP---------PRH-------------------
MUL_0821|M.ulcerans_Agy99           SRLFSRAHGTSPRQWRALP---------PRH-------------------
Mb1966c|M.bovis_AF2122/97           RRSFIRRVGISPDQYRKAFA------------------------------
Rv1931c|M.tuberculosis_H37Rv        RRSFIRRVGISPDQYRKAFA------------------------------
MAV_4981|M.avium_104                RRVFVEHLGLSPKAYRDRFRTAARG-------------------------
TH_2340|M.thermoresistible__bu      TRAFTQFCGETPSAYRHRISTDPHSRPTSADPIG----------------
                                       * .  * .*  ::                                  

Mvan_3008|M.vanbaalenii_PYR-1       PLA------
MSMEG_0213|M.smegmatis_MC2_155      HLA------
MAB_4709c|M.abscessus_ATCC_199      G--------
Mflv_2899|M.gilvum_PYR-GCK          EKTGANASP
MMAR_1063|M.marinum_M               ---------
MUL_0821|M.ulcerans_Agy99           ---------
Mb1966c|M.bovis_AF2122/97           ---------
Rv1931c|M.tuberculosis_H37Rv        ---------
MAV_4981|M.avium_104                ---------
TH_2340|M.thermoresistible__bu      ---------