For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SNHNYTRTELYIDGAWVAPIGTDAVEVINPATEQALGSVPGGTDADVDAAVASARRAFDPSIGVTERRER LDAVITAMEKRLPDIAETITSEMGAPVRIAQSVQTQVPLAVARAFADALAAYDFEERIGNSLVVREPYGV VAAITPWNYPLYQVVAKVLPAIAAGCTVVLKPSNEAPLSVFEFVEALEDAGLPPGVVNLVSGPGRVIGER MAAHPDVDFVSFTGSTDVGSRVGELAGKSIKKVALELGGKSANVILDGADLATAVKVGVGNAFLNGGQTC MAWTRMLVPESRYGEALDLIGAAVSKYPVGDPTDPTTRIGPSASQSQYQSVLGFIERAQRDGARLLTGGT EKVRDVGYYVSPTVFADVDPGSELGQEEVFGPVLAVIPYRDADDALAIANGTPYGLSGAVWAADDDTAVA FARQVQTGQLDINGGRYNPAAPFGGYKKSGIGRELGRIGFEEYLQVKSLQLP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2878 | - | - | 100% (473) | betaine-aldehyde dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_4953 | - | e-113 | 46.97% (462) | aldehyde dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_0240 | - | e-109 | 43.71% (485) | betaine-aldehyde dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0791 | aldA | 3e-93 | 42.86% (455) | aldehyde dehydrogenase NAD dependant AldA |
M. gilvum PYR-GCK | Mflv_1797 | - | 1e-111 | 46.10% (462) | aldehyde dehydrogenase |
M. tuberculosis H37Rv | Rv0223c | - | 1e-104 | 42.53% (482) | aldehyde dehydrogenase |
M. leprae Br4923 | MLBr_02573 | gabD1 | 2e-58 | 32.54% (461) | succinic semialdehyde dehydrogenase |
M. abscessus ATCC 19977 | MAB_4484 | - | 1e-111 | 45.24% (473) | aldehyde dehydrogenase |
M. marinum M | MMAR_0472 | - | 1e-100 | 41.77% (474) | aldehyde dehydrogenase |
M. avium 104 | MAV_5202 | - | 1e-111 | 46.35% (466) | aldehyde dehydrogenase |
M. smegmatis MC2 155 | MSMEG_2881 | - | 0.0 | 84.78% (473) | aldehyde dehydrogenase |
M. thermoresistible (build 8) | TH_4605 | - | 1e-112 | 46.14% (466) | PUTATIVE aldehyde dehydrogenase |
M. ulcerans Agy99 | MUL_1122 | - | 2e-99 | 41.77% (474) | aldehyde dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_2878|M.vanbaalenii_PYR-1 -MSNHNYTRTELYIDGAWVAPIGTDAVEVINPATEQALGSVPGGTDADVD MSMEG_2881|M.smegmatis_MC2_155 -MTNHEYDRTTLYIDGQWVAPAATGTIDVVDPATEEVIGHVPGGTEADVD Mflv_1797|M.gilvum_PYR-GCK -----MREYLKHYIDGQWVDPVRPNALDVDNPATEEVSGKIALGSSADVD TH_4605|M.thermoresistible__bu VEDEGMREYLKFYIDGAWVDPVDLKTLDVDDPATEEVSGRIAIGSATDVD MAV_5202|M.avium_104 -----MREYLKFYIDGQWVDPVRPNTFDVENPATEQVCGKISLGSAADVD MMAR_0472|M.marinum_M --MGEKTEYDKLFIGGKWTEPSTSEVIEVHCPATGEYVGKVPLAAAADVD MUL_1122|M.ulcerans_Agy99 --MGEKTEYDKLFIGGRWTEPSTSEVIEVHCPATGEYVGKVPLAAAADVD Rv0223c|M.tuberculosis_H37Rv -MSDSATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVD MAB_4484|M.abscessus_ATCC_1997 -----MTNYDKLFIGGVWTEPATDQVIEVISPATGQKVGQCPLASPADVD Mb0791|M.bovis_AF2122/97 -MALWGDGISALLIDGKLSD-GRAGTFPTVNPATEEVLGVAADADAEDMG MLBr_02573|M.leprae_Br4923 ------------------------MSIATINPATGETVKTFTPTTQDEVE . . *** : . :: Mvan_2878|M.vanbaalenii_PYR-1 AAVASARRAFD--PSIGVT--ERRERLDAVITAMEKRLPDIAETITSEMG MSMEG_2881|M.smegmatis_MC2_155 VAVAAARRAFD--PLIGVD--ERRQRLDAVITAMEKRLPQIAETITREMG Mflv_1797|M.gilvum_PYR-GCK LAVTAARRAFG--TWSQTTREERLELLGAIMAEYQNRAADLADAVHEEMG TH_4605|M.thermoresistible__bu NAVRAARRAFP--AWSQSSREERLELLQGILAEYQKRSADLADAVHEEMG MAV_5202|M.avium_104 VAVGAARRAFG--RWSQSSREDRLDLLQAILAEYQKRADDLAAAVTEEIG MMAR_0472|M.marinum_M AAVAAARAAFDNGPWPSTPPKERATVIANALKLLEERKDHFAKLLADETG MUL_1122|M.ulcerans_Agy99 AAVAAARAAFDNGPWPSTPPKERATVIANALKLLEERKDHFAKLFADETG Rv0223c|M.tuberculosis_H37Rv AAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETG MAB_4484|M.abscessus_ATCC_1997 AAVSAARRAFDNGPWPRLTPHERQAVLQKAVSLLESRKDEICKAIADETG Mb0791|M.bovis_AF2122/97 RAIEAARRAFDSTDWSRNT-ELRVRCVRQLRDAMQQHVEELRELTISEVG MLBr_02573|M.leprae_Br4923 DAIARAYARFDN--YRHTTFTQRAKWANATADLLEAEANQSAALMTLEMG *: * * * . * * Mvan_2878|M.vanbaalenii_PYR-1 APVRIAQSVQTQVPLAVARAFAD-ALAAYDFEERI----GNSLVVR---- MSMEG_2881|M.smegmatis_MC2_155 APIRISQTVQTQVPLAVARGFAD-ALADFEFSERI----GNSLVVR---- Mflv_1797|M.gilvum_PYR-GCK APASLASGPQVNLGIGHLATAID-ALKNFQFEEQH----GSTLVVK---- TH_4605|M.thermoresistible__bu APPSLAKGPQVNMGLGHLTTAID-VLKNFSFEEQR----GATLVVK---- MAV_5202|M.avium_104 APPSLAAGPQVFLGIGHLTTAIE-VLKNFAFTEQR----GATLIAR---- MMAR_0472|M.marinum_M QPPMTVETMHWMGSIGALNFFAGPAVDQVRWKEIRNGSYGQTIVHR---- MUL_1122|M.ulcerans_Agy99 QPPMTVETMHWMGSIGALNFFAGPAVDQVRWKEIRNGSYGQTIVHR---- Rv0223c|M.tuberculosis_H37Rv QPPTIIETMHWMGSMGAMNYFAG-AADKVTWTETRTGSYGQSIVSR---- MAB_4484|M.abscessus_ATCC_1997 APPMVIETLQWMGGFGAIQYYAN-AADAVKWKELRNGAYGQTLVTR---- Mb0791|M.bovis_AF2122/97 APRMLTASAQLEGPVGDLSFAAD-TAESYPWKQDLGEASPLGIATRRTLA MLBr_02573|M.leprae_Br4923 KTLQSAKDEAMKCAKGFRYYAEKAETLLADEPAEAAAVGASKALAR---- . . : Mvan_2878|M.vanbaalenii_PYR-1 -EPYGVVAAITPWNYPLYQVVAKVLPAIAAGCTVVLKPSNEAPLSVFEFV MSMEG_2881|M.smegmatis_MC2_155 -EPYGVVSAITPWNYPLYQVVAKVLPAIAAGCTVVLKPSNEAPLSVFEFV Mflv_1797|M.gilvum_PYR-GCK -EPIGVCGLITPWNWPINQIACKVFPALATGNTMVLKPSEVAPYSAQIFT TH_4605|M.thermoresistible__bu -EPIGVCGLITPWNWPLNQIACKVFPALATGCTMVLKPSEVAPYSGQIFT MAV_5202|M.avium_104 -EPIGVCGLITPWNWPINQVAVKVYPALATGCTVVLKPSEVAPFSSYIFA MMAR_0472|M.marinum_M -EPIGVVGAIVAWNVPLFLAINKLGPALLAGCTVVLKPAAETPLTANALA MUL_1122|M.ulcerans_Agy99 -EPIGVVGAIVAWNVPLFLAINKLGPAPLAGCTVVLKPAAETPLTANALA Rv0223c|M.tuberculosis_H37Rv -EPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALA MAB_4484|M.abscessus_ATCC_1997 -EPAGVVAAIAAWNVPLFLALNKIGPAFLAGCAVVLKPAAETPLSSFILA Mb0791|M.bovis_AF2122/97 REAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCAAALG MLBr_02573|M.leprae_Br4923 YQPLGVVLAVMPWNFPLWQTVRFAAPALMAGNVGLLKHASNVPQCALYLA :. ** : .** * ** :* . :** : .* : Mvan_2878|M.vanbaalenii_PYR-1 EALEDAG-LPPGVVNLVSGPGRVIGERMAAHPDVDFVSFTGSTDVGSRVG MSMEG_2881|M.smegmatis_MC2_155 EALDDAG-LPPGVVNLVSGPGSVIGERMAAHPDVDFVSFTGSTEVGARVG Mflv_1797|M.gilvum_PYR-GCK EILDAAG-VPAGVYNLVYGDGPGVGAAISSHPEIDMVSFTGSTRAGIEVA TH_4605|M.thermoresistible__bu EILDTAG-VPAGVYNMVFGDGPGVGVALSSHPDVDLVSFTGSTRAGVDVA MAV_5202|M.avium_104 EILAAAG-VPAGVFNLVNGDGPGVGAALASHPDIDLVSFTGSTRAGVEVA MMAR_0472|M.marinum_M EVFAEAG-LPEGVLSVVPG-GVETGQALTSNPGVDLFTFTGSSAVGKEIG MUL_1122|M.ulcerans_Agy99 EVFAEAG-LPEGVLSVVPG-GVETGQALTSNPGVDLFTFTGSSAVGKEIG Rv0223c|M.tuberculosis_H37Rv EVFAEVG-LPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG MAB_4484|M.abscessus_ATCC_1997 EVFAEAG-VPEGVLSVVPG-GAETGRALTNNPDVDVFSFTGSTAVGKEIA Mb0791|M.bovis_AF2122/97 EIIVEHTDFPPGVVNIVTSSSHALGALLAKDPRVDMISFTGSTATGRAVM MLBr_02573|M.leprae_Br4923 DVIARGG-FPEDCFQTLLISANGVEAILR-DPRVAAATLTGSEPAGQAVG : : .* . . : . : .* : ::*** .* : Mvan_2878|M.vanbaalenii_PYR-1 ELAGKSIKKVALELGGKSANVILDGADLATAVKVGVGNAFLNGGQTCMAW MSMEG_2881|M.smegmatis_MC2_155 ELAGRNIKKVALELGGKSANVILDGADLATAVRVGVGNAFLNGGQTCMAW Mflv_1797|M.gilvum_PYR-GCK RNAAPTVKRVTQELGGKSPNIVLDDDDFAKSVAAGTSVMMVNSGQSCNAP TH_4605|M.thermoresistible__bu RNAAPTVKRVTQELGGKSANIVLDDADFAKSVTAGVTTMMLNSGQSCNAP MAV_5202|M.avium_104 RNAAPTVKRVTQELGGKSPNIVLDDGGFADAVRAGVANMMPNSGQSCNAP MMAR_0472|M.marinum_M RRAAEMLKPCTLELGGKSAAILLEDVDLSTAVPMMVFSGIMNTGQACVGQ MUL_1122|M.ulcerans_Agy99 RRAAEMLKPCTLELGGKSAAILLEDVDLSTAVPMMVFSGIMNTGQACVGQ Rv0223c|M.tuberculosis_H37Rv RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQ MAB_4484|M.abscessus_ATCC_1997 EIAAKNLKKVTLELGGKSAAIVLEDADLAAALPMLVFSGLMNAGQGCVNQ Mb0791|M.bovis_AF2122/97 ADAAATIKKVFLELGGKSAFVVLDDADLAAASAVSAFSACMHAGQGCAIT MLBr_02573|M.leprae_Br4923 AIAGNEIKPTVLELGGSDPFIVMPSADLDAAVATAVTGRVQNNGQSCIAA *. :* ****... ::: . .: : . : ** * Mvan_2878|M.vanbaalenii_PYR-1 TRMLVPESRYGEALDLIGAAVSKYPVGDPTDPTTRIGPSASQSQYQSVLG MSMEG_2881|M.smegmatis_MC2_155 TRMLVPLSRYSEALDLVAAAVAKYTVGDPWDPATRIGPSASQRQFETVLG Mflv_1797|M.gilvum_PYR-GCK SRMLVPNSRMDEAIAVARETAGAVKVGDPGD-QSAIGPVASRAQFEKIQG TH_4605|M.thermoresistible__bu SRMLVPNSRMDEAIEIARETAAQVAVGDPDN-KTAIGPVVSRVQFDKIQR MAV_5202|M.avium_104 SRMLVPASRMAEAISIAREVAEQVQVGDPDD-ATAIGPVASRAQFEKVQR MMAR_0472|M.marinum_M TRILAPRSRYEEIVEAVSAFVQALPVGPPSDPAAQIGSLISEKQRARVEG MUL_1122|M.ulcerans_Agy99 TRILAPRSRYEEIVEAVSAFVQTLPVGPPSDPAAQIGSLISEKQRARVEG Rv0223c|M.tuberculosis_H37Rv TRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEG MAB_4484|M.abscessus_ATCC_1997 TRVLAPRSRYDEVVDGIVGMVSLMGVGLPDDPATQVGPLITEKQRTRVEG Mb0791|M.bovis_AF2122/97 TRLVVPRARYEEAVAIAAATMSSIRPGDPNDPGTVCGPLISARQRDRVQG MLBr_02573|M.leprae_Br4923 KRFIAHADIYDEFVEKFVARMETLRVGDPTDPDTDVGPLATESGRAQVEQ .*.:. * : * * : : *. : : Mvan_2878|M.vanbaalenii_PYR-1 FIERAQRDGARLLTGGTEKVR--DVGYYVSPTVFADVDPGSELGQEEVFG MSMEG_2881|M.smegmatis_MC2_155 FIERASRDGARLVAGGPEKIR--DTGYYVAPTVFADVLPDSDLGQEEVFG Mflv_1797|M.gilvum_PYR-GCK LIQKGIDEGATLVVGGTGRPDGVDKGYYVKPTVFANVTNDMTIAREEIFG TH_4605|M.thermoresistible__bu LIQQGIDEGATVVVGGPGRPDGLEVGYYVKPTVFANVKNDMTIAREEIFG MAV_5202|M.avium_104 LIQQGIDEGATVVAGGPGRPAGLDQGYYVKPTVFADVTNDMTIAREEIFG MMAR_0472|M.marinum_M YIAKGIEEGARLVSGG-GRPEGLDNGFFVQPTVFADVDNKMTIAQEEIFG MUL_1122|M.ulcerans_Agy99 YIAKGIEEGARLVSGG-GRPESLDNGFFVQPTVFADVDNKMTIAQEEIFG Rv0223c|M.tuberculosis_H37Rv YIAKGIEEGARLVCGG-GRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFG MAB_4484|M.abscessus_ATCC_1997 YIAKGIAEGARLAYGG-KRPEGLDGGYFVQPTIFADVDNSMTIAQEEIFG Mb0791|M.bovis_AF2122/97 YLDLAVAEGGRFACGG-ARPADREVGFYIEPTVIAGLTNDARVAREEIFG MLBr_02573|M.leprae_Br4923 QVDAAAAAGAVIRCGG-KRPD--RPGWFYPPTVITDITKDMALYTDEVFG : . *. . ** : *:: **:::.: : :*:** Mvan_2878|M.vanbaalenii_PYR-1 PVLAVIPYRDADDALAIANGTPYGLSGAVWAADDDTAVAFARQVQTGQLD MSMEG_2881|M.smegmatis_MC2_155 PVLAVIPFRDSDEALEIANGTPYGLSGAVWAADDDTAIAFARQVQTGQLD Mflv_1797|M.gilvum_PYR-GCK PVLCILGYDDLDQAVAIGNDTEYGLAGYVSGSDLEQARAVARRIRAGSVA TH_4605|M.thermoresistible__bu PVLCILGYDDLDDAIEIANDTDYGLAGYVSGSDLEQARALARRIRAGSIA MAV_5202|M.avium_104 PVLCILGYDDLDHAVRLANDTDYGLAGYVSGADLDTAREVAGKIRAGWVT MMAR_0472|M.marinum_M PVLVVIPYDTEEDAIKIANDSVYGLAGSVWTSNVPKGIEISEKIRTGTYA MUL_1122|M.ulcerans_Agy99 PVLVVIPYDTKEDAIKIANDSVYGLAGSVWTSNVPKGIEISEKIRTGTYA Rv0223c|M.tuberculosis_H37Rv PVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYG MAB_4484|M.abscessus_ATCC_1997 PVLSIIAYDSVDEAVKIANDSNYGLAGSVWTTDVQKGLEVAAQIRTGTYG Mb0791|M.bovis_AF2122/97 PVLTVIAHDGDDDAVRIANDSPYGLSGTVYGADPQRAARIASRLRVGTVN MLBr_02573|M.leprae_Br4923 PVASVYCATNIDDAIEIANATPFGLGSNAWTQNESEQRHFIDNIVAGQVF ** : :.*: :.* : :**.. . : . .: .* Mvan_2878|M.vanbaalenii_PYR-1 INGGR-YNPAAPFGGYKKSGIGRELGRIGFEEYLQVKSLQ--LP------ MSMEG_2881|M.smegmatis_MC2_155 INGGK-YNPAAPFGGYKKSGVGRELGRFGFEEYLQTKSLQ--LP------ Mflv_1797|M.gilvum_PYR-GCK INHG--FDMAAPFGGYKRSGNGREWGPFAFDEFLEVKAALGYAPA----- TH_4605|M.thermoresistible__bu INHG--FDLNAPFGGYKRSGNGREWSDYGFHEYLETKAILGYSPS----- MAV_5202|M.avium_104 INHA--FDLNAPFGGYKRSGNGREWSDFGFHEYLEVKSILGYAPAQADR- MMAR_0472|M.marinum_M INWYA-FDPCCPFGGYKNSGIGRENGPEGVEHFTQQKSVLMPMGYTLES- MUL_1122|M.ulcerans_Agy99 INWYA-FDPCCPFGGYKNSGIGRENGPEGVEHFTQQKSVLMPMGYTLES- Rv0223c|M.tuberculosis_H37Rv INWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMGYTVA-- MAB_4484|M.abscessus_ATCC_1997 INWYA-FDPSCPFGGYKQSGIGRENGPEGIEEYCELKSVLLPMGYTLESI Mb0791|M.bovis_AF2122/97 VNGGVWYCADAPFGGYKQSGIGREMGLLGFEEYLEAKLIATAAN------ MLBr_02573|M.leprae_Br4923 INGMTVSYPELPFGGIKRSGYGRELSTHGIREFCNIKTVWIA-------- :* **** *.** *** . .. .: : *