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M. vanbaalenii PYR-1 Mvan_2363 (-)

annotation: helix-turn-helix domain-containing protein
coordinates: 2521385 - 2522365
length: 326

PPALTEHEIFYTEDISKATRLIGRALSPLTLTVDPADADGFAATMHGIRLRNVSMLYLDLHVPASIDIPE
SGRYYAVHMPMNGVAMVHHPSSTFQASTLRSLVSSPGVPLRIDLGVDTPQLLIRIEQQAMTAHVTRLIGR
NLARPLVFEPEFDLATEAAMRWNAAVQLVHTEVYHAGSLIQKGRAIGPVEELVMSSLLHLQPSNYHADIT
QPSPPDPRRTVIQQAMDFIDDHLAERITMDSLAAAVHMSVRSIQQGFRSELGMSPMAFVRERRLERVHEE
LADAIPSDGVTVTAVAERWGFHHLGSFAVEYRKRWGEAPSETLRR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_2363--100% (326)helix-turn-helix domain-containing protein
M. vanbaalenii PYR-1Mvan_0118-3e-2125.77% (326) helix-turn-helix domain-containing protein
M. vanbaalenii PYR-1Mvan_0336-4e-1435.04% (117) helix-turn-helix domain-containing protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3863-1e-0527.43% (113) AraC family transcriptional regulator
M. gilvum PYR-GCKMflv_0534-8e-3629.69% (320) helix-turn-helix domain-containing protein
M. tuberculosis H37RvRv3833-1e-0527.43% (113) AraC family transcriptional regulator
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_1313-1e-0726.52% (132) AraC family transcriptional regulator
M. marinum MMMAR_4426-2e-0731.58% (95) transcriptional regulatory protein
M. avium 104MAV_4063-2e-2139.71% (136) transcriptional regulator, AraC family protein
M. smegmatis MC2 155MSMEG_2260-1e-14976.69% (326) putative transcriptional regulator
M. thermoresistible (build 8)TH_1032-1e-13369.11% (327) putative transcriptional regulator
M. ulcerans Agy99-----

CLUSTAL 2.0.9 multiple sequence alignment


Mvan_2363|M.vanbaalenii_PYR-1       ----------------------------------MPPAL----------T
MSMEG_2260|M.smegmatis_MC2_155      -------MSRLTRLGFIDIRRTSDPVRRKVRSRGVPPAL----------A
TH_1032|M.thermoresistible__bu      -------MSRLTRLGFIDVRRTSNPVRRKVRSRGVPPSL----------V
Mb3863|M.bovis_AF2122/97            --------------------------------------------------
Rv3833|M.tuberculosis_H37Rv         --------------------------------------------------
Mflv_0534|M.gilvum_PYR-GCK          MTQDPESEARPSALVFDGATDSVGELRLPQRESELLPMANGPKMAGSYFS
MAV_4063|M.avium_104                ----MGLTTMTVRDDGAPVGAPAEAARSDYGPVDPVLAVNGERRARPVAV
MAB_1313|M.abscessus_ATCC_1997      --------------------------------------------------
MMAR_4426|M.marinum_M               ------------MTSAEQVAAKPGMARRRVGGIMVNPSRPGQRCAATSAR
                                                                                      

Mvan_2363|M.vanbaalenii_PYR-1       EHEIFYTEDISKATRLIGRALSPLTLTVDPADADGFAATMHGIRLRNVSM
MSMEG_2260|M.smegmatis_MC2_155      DHEIFYTEDVREAARLVGRTLSPLTLTVDAADAGGFAATMHGVRLRNVSL
TH_1032|M.thermoresistible__bu      DNEIFYTEDVAEAARLTGQVLAPLTLTVGAPDSAGFAATAHGVRLRNVSM
Mb3863|M.bovis_AF2122/97            ---------------------------------------MSENSHHRLAT
Rv3833|M.tuberculosis_H37Rv         ---------------------------------------MSENSHHRLAT
Mflv_0534|M.gilvum_PYR-GCK          RRETVCTEQLSAAEHLASEIFTPHRLRYSRRGQR-LNARLSAARIGAVTV
MAV_4063|M.avium_104                EYKQFRGADAQSARRFFATAYDPGWRIAGVTNHCVVSHRRSD--TGSMTV
MAB_1313|M.abscessus_ATCC_1997      ----------------------------------MVFGGFGGVALGELQI
MMAR_4426|M.marinum_M               RNERFEAFQHAISQTFVP--LALCVDDVGTFRGQVRSASLGTVQLSDVRV
                                                                                   :  

Mvan_2363|M.vanbaalenii_PYR-1       L-YLDLHVPASIDIPESGRYYAVHMPMNGVAMVHHPSSTFQASTLRSLVS
MSMEG_2260|M.smegmatis_MC2_155      L-YLDLHVAATLDIPESGRYFAVHMPLNGSATVTHPAAEFDAGTTRSLVT
TH_1032|M.thermoresistible__bu      L-YLDLHVPCALDIPRLGAYFAVHMPLNGSAEVHHRGRQFQITPVRSLVT
Mb3863|M.bovis_AF2122/97            T-SLTLPPGARIERHR-HPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWI
Rv3833|M.tuberculosis_H37Rv         T-SLTLPPGARIERHR-HPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWI
Mflv_0534|M.gilvum_PYR-GCK          G-YLRYGADVELVNSTALDDYHINVPLTSHADSWCGPATAQATPTQAAVF
MAV_4063|M.avium_104                D-EVAIQGRMTLEIPA-GDTVVVIQPRAGALNVAGGP---LATPDFPLLV
MAB_1313|M.abscessus_ATCC_1997      T-FVSEPIVEPTEWYFDEPHHVVAVYQGG--RILSKEIDFVDGLSRRYLP
MMAR_4426|M.marinum_M               GNDVLVRRTAKLINHSAPDYLKVAMPLNGKCVVTQDGHEETLAPRDFAVY
                                       :                  :     .                     

Mvan_2363|M.vanbaalenii_PYR-1       SPGVPLRIDLGVDTPQLLIRIEQQAMTAHVTRLIGRNLARPLVFEPEFDL
MSMEG_2260|M.smegmatis_MC2_155      SPGDPVRMSFAHDSPQMLVRIEEEAMNAHLTRLLGRNLVGPLKFEPEFDL
TH_1032|M.thermoresistible__bu      SPRGPLRIAFEHDSPQLVIRIEEAAMAAHLTRLLGRRLRRPLEFDPEFDM
Mb3863|M.bovis_AF2122/97            PAG-----------------------CWHQHKFHGHTQFHGVALDPQR-Y
Rv3833|M.tuberculosis_H37Rv         PAG-----------------------CWHQHKFHGHTQFHGVALDPQR-Y
Mflv_0534|M.gilvum_PYR-GCK          LPGRPAGIKWAADCGQLCVKFSRTDLEYELEGLLGRPAVRPLNITHSMDL
MAV_4063|M.avium_104                AHG--MACVLHCHGARFDVVTIAAEVLQKVAAEWHTALSQQTQFLNWRPR
MAB_1313|M.abscessus_ATCC_1997      KVG--------------DVLVVPMGSRAAITTQGERASFCRFDIPTRLLD
MMAR_4426|M.marinum_M               DTTR-------------PYSLAFSGAYRALVIMFPRDQVRLSSAELTRLT
                                                                                      

Mvan_2363|M.vanbaalenii_PYR-1       ATEAAMRWNAAVQLVHTEVYHAGSLIQKGRAIGPVEELVMSSLLHLQPSN
MSMEG_2260|M.smegmatis_MC2_155      TTEAATRWHAAVQLIHTEVYHAGSLVQRGCAIGPVEELAMSSLLYLQPST
TH_1032|M.thermoresistible__bu      TTEAAMRWHTAVQLIHTEVFHPGSLVQRGQGIGPVEELVMSSLLQLQPST
Mb3863|M.bovis_AF2122/97            RGGPATPTVLAVNPLMRELIIACSQADR---TDTDEHHRMLAVLQDQLP-
Rv3833|M.tuberculosis_H37Rv         RGGPATPTVLAVNPLMRELVIACSQADR---TDTDEHHRMLAVLQDQLP-
Mflv_0534|M.gilvum_PYR-GCK          TADSSRAWLALLSVLYREVSRPESIVQHPMTGRHFEQLVMHGFLHAQPH-
MAV_4063|M.avium_104                SRAAVRAWHRALDYAMLTLASP-DTARQPLIAAGMAGLLAGALLECYPS-
MAB_1313|M.abscessus_ATCC_1997      QRDLQPRVAYSDPLILQLASRMYSVADRTDVIARLLRESLADVVRLHLSD
MMAR_4426|M.marinum_M               ARRLNGRDGLGAPVSAFLAEMGNRLDDANTAGTLYLADAVLDMLAASFAA
                                                                              .:      

Mvan_2363|M.vanbaalenii_PYR-1       YHADITQPSP-PDPRRTVIQQ-AMDFIDDHLAER-ITMDSLAAAVHMSVR
MSMEG_2260|M.smegmatis_MC2_155      YYSDITRPTP-ATPRRAVIQQ-AVDYIEDHLAEK-ITMESLAEALHMSVR
TH_1032|M.thermoresistible__bu      YYDELLRPPPQPGQRRAVVRA-AMNYIEEHLAER-ITVESVAKAVHVSVR
Mb3863|M.bovis_AF2122/97            -TTSIREPLWVPSPTDRRLRH-ACALIADNLTQP-LTLQQIGGRIGVSQR
Rv3833|M.tuberculosis_H37Rv         -TTSIREPLWVPSPTDRRLRH-ACALIADNLTQP-LTLQQIGGRIGVSQR
Mflv_0534|M.gilvum_PYR-GCK          YQAMALAADQHAAPPPKVLRT-ALDLIEEHPERS-WTTTDLAREVGISAR
MAV_4063|M.avium_104                --NLTEQDPVSDLALPETLKE-AVSFIHRHAAED-IGINDVAAAVHLTPR
MAB_1313|M.abscessus_ATCC_1997      HYAALRPRPERRRLLDSAMQARVTEYIEDGLDAD-ISLSALAGHAQMSTS
MMAR_4426|M.marinum_M               QLSDETGGNAARGTRGLALRI--RAFIESRLGDPGLDVSTIAAAHHVSVR
                                                      ::      *             :.    ::  

Mvan_2363|M.vanbaalenii_PYR-1       SIQQGFRSELGMSPMAFVRERRLERVHEELADAIPSDGVTVTAVAERWGF
MSMEG_2260|M.smegmatis_MC2_155      SIQQGFRTELGMSPTTFIRERRLERVREELTDAIPSDGVTVTAVAERWGF
TH_1032|M.thermoresistible__bu      SIQQNFRDELGLTPMEFVRERRLQRVHEELTDAIPSDGVTVTAVAQRWGF
Mb3863|M.bovis_AF2122/97            TLSRLFSDELGMTFPQWRTQLRLQHALVLLAERH-----DVTSVASECGW
Rv3833|M.tuberculosis_H37Rv         TLSRLFSDELGMTFPQWRTQLRLQHALVLLAERH-----DVTSVASECGW
Mflv_0534|M.gilvum_PYR-GCK          ALQESFKRHVGLPPLTYLREVRLIRAHAELAASSES-AVTVARVAMKWGF
MAV_4063|M.avium_104                AVQYLFRRQLDTTPTEYMRRVRLSRAHQELVAATTASS-TVTEIAQRWGF
MAB_1313|M.abscessus_ATCC_1997      EFRKAFTEVFGHTPYQFVLDRRMSRAKQLLATTDLS----VTDISVAVGF
MMAR_4426|M.marinum_M               YLQKLFESQ-GQTVTGWIRDRRIEHCRRDLEDHRLA-EVPVSSIAARWGL
                                     .   *    . .   :    *: :    *          *: ::   * 

Mvan_2363|M.vanbaalenii_PYR-1       HHLGSFAVEYRKRWGEAPSETLRR----------------
MSMEG_2260|M.smegmatis_MC2_155      HHLGSFAVEYRKRWGETPSETLRR----------------
TH_1032|M.thermoresistible__bu      QHLGSFAVEYRKRWGETPSETLRR----------------
Mb3863|M.bovis_AF2122/97            ATPSAFIDTYRQAFGHTPGQAAKPMAATRLTRLRRARDRR
Rv3833|M.tuberculosis_H37Rv         ATPSAFIDTYRQAFGHTPGQAAKPMAATRLTRLRRARDRR
Mflv_0534|M.gilvum_PYR-GCK          GHLGRFSAEYRRKFGVTPQHTLRAA---------------
MAV_4063|M.avium_104                AHTGRFAVLYRQTYGQSPHTTLRQQTAV------------
MAB_1313|M.abscessus_ATCC_1997      SSPSHFATTFKTRIGVTPTAYRSGV---------------
MMAR_4426|M.marinum_M               VNASHFSRLFKAVHGSSPAEYRAQVSLRSPSASTDRG---
                                       . *   ::   * :*