For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTPLSIVTLTMNTALDVAADADEVVPTEKVRCRAVRYDAGGGGVNVARFARVLGATVSAVFTAGGSTGSR VIDMVEAAGVPGVPVPIEGATRESFTVNERATGKQYRFVLPGPVLSPGEEARCLEALRQAAYSAQFVVAS GSLPPGVPLDFYQRVADMCREAGALLILDTSGGGLSHITSGVYLLKPSVRELRECVGRPLPTEAEQLAAA HELIDRGIARIVVVSLGAQGALLAASSHSERFPALPVAAVSGIGAGDAMVAGITVGLAEGWTLDRAVRYG IAAATAKLQTPATSVFDRADVEHHFAEQLAPSGT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1394 | - | - | 100% (314) | ribokinase-like domain-containing protein |
M. vanbaalenii PYR-1 | Mvan_4105 | - | e-100 | 61.79% (301) | ribokinase-like domain-containing protein |
M. vanbaalenii PYR-1 | Mvan_0095 | - | 4e-23 | 28.66% (321) | ribokinase-like domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2054c | pfkB | 1e-104 | 63.52% (307) | phosphofructokinase pfkB (phosphohexokinase) |
M. gilvum PYR-GCK | Mflv_4987 | - | 1e-126 | 73.70% (308) | ribokinase-like domain-containing protein |
M. tuberculosis H37Rv | Rv2029c | pfkB | 1e-104 | 63.52% (307) | phosphofructokinase PfkB (phosphohexokinase) |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_3482 | pfkB_1 | 1e-105 | 65.03% (306) | phosphofructokinase, PfkB_1 |
M. avium 104 | MAV_0347 | - | 7e-06 | 24.51% (253) | kinase, PfkB family protein |
M. smegmatis MC2 155 | MSMEG_3947 | - | 1e-107 | 63.84% (307) | 6-phosphofructokinase isozyme 2 |
M. thermoresistible (build 8) | TH_1728 | pfkB | 6e-97 | 60.26% (302) | Probable phosphofructokinase PfkB (PHOSPHOHEXOKINASE) |
M. ulcerans Agy99 | MUL_4435 | pfkB | 9e-05 | 35.06% (77) | fructokinase, PfkB |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1394|M.vanbaalenii_PYR-1 MT--------------PLSIVTLTMNTALDVAADADEVVPTEKVRCRAVR Mflv_4987|M.gilvum_PYR-GCK MSG-------------TAAIVTLTMNTALDVTADADNVVPTEKIRCRAER Mb2054c|M.bovis_AF2122/97 MTEPAAWD------EGKPRIITLTMNPALDITTSVDVVRPTEKMRCGAPR Rv2029c|M.tuberculosis_H37Rv MTEPAAWD------EGKPRIITLTMNPALDITTSVDVVRPTEKMRCGAPR MMAR_3482|M.marinum_M MTSPADPA------VRGPQIVTLTMNPALDITTCVGVVRPTEKLRCSETR MSMEG_3947|M.smegmatis_MC2_155 MRSAAFAVGKRRMDTGRPNIVTLTMNPALDITTCADQVRHTDKIRCGATR TH_1728|M.thermoresistible__bu ------------------------MNPALDISTTTDRVHHTSKVRCHGVR MAV_0347|M.avium_104 --------------------MVVIGQIGRDLVLRTDRPPTAGESATVLRR MUL_4435|M.ulcerans_Agy99 --------------------------MARGLVIGEALIDIVDGP----DP . .: . Mvan_1394|M.vanbaalenii_PYR-1 YDAGGG-GVNVARFARVLGATVSAVFTAGG-STGSRVIDMVEAAGVPGVP Mflv_4987|M.gilvum_PYR-GCK YDAGGG-GVNVARFAHALGAPVSAVFTAGG-STGARVIDLVHATGVCEIP Mb2054c|M.bovis_AF2122/97 YDPGGG-GINVARIVHVLGGCSTALFPAGG-STGSLLMALLGDAGVPFRV Rv2029c|M.tuberculosis_H37Rv YDPGGG-GINVARIVHVLGGCSTALFPAGG-STGSLLMALLGDAGVPFRV MMAR_3482|M.marinum_M YDPGGG-GINVARIAHVLGGSVFAVFPVGG-SHGAHVSKLLSEAGVAFGE MSMEG_3947|M.smegmatis_MC2_155 YDPGGG-GINVARVAHVLDGPVVAVFTSGG-PTGAMVADLVRREGVAYEP TH_1728|M.thermoresistible__bu HDPGGG-GINVARIAHVLGAPVTAVFPIGG-HTGELLTDMLEHSGVSYHS MAV_0347|M.avium_104 EELLGGKGANQAVGLAQLGVPVTLIGVVGDDQAGTSILQQAQRDGIDVSK MUL_4435|M.ulcerans_Agy99 AEYVGGSPLNVAVGPARLGRDVDLLTHIGRDARGRRIAEYIESSGVQLVS : ** * * *. : * * : *: Mvan_1394|M.vanbaalenii_PYR-1 VPIEGATRESFTVNERATGKQYRFVLPGPVLSPGEEARCLEALRQAAYSA Mflv_4987|M.gilvum_PYR-GCK VLIEGGTRESFTVNDRASGRQYRFVLPGPVLSLGEQARCLEALRRAAGTA Mb2054c|M.bovis_AF2122/97 IPIAASTRESFTVNESRTAKQYRFVLPGPSLTVAEQEQCLDELRGAAASA Rv2029c|M.tuberculosis_H37Rv IPIAASTRESFTVNESRTAKQYRFVLPGPSLTVAEQEQCLDELRGAAASA MMAR_3482|M.marinum_M IPIAASTRESFTVNESSTGEQYRFVLPGPVLAPEEQAQCLQELGFAARSA MSMEG_3947|M.smegmatis_MC2_155 VEISGVTRESFTVNEGCTGKQYRFVLPGPHLTMTEQAQCVENLRRHAMSA TH_1728|M.thermoresistible__bu VPIADLTRESLTVNEESTGHQYRFVLPGPFVTHEEQDAVLQRLREVAASA MAV_0347|M.avium_104 VARRGTTALLVDVVAAPPERMLLEDVPDSSLVRVADLDRSSSLFDTADTV MUL_4435|M.ulcerans_Agy99 GSQTADRTPTATARIGPDGS--ATYAFDLEWQIPDTPPVAPPLLVHTGSI . . * : : Mvan_1394|M.vanbaalenii_PYR-1 QFVVASGSLPPGVPLDFYQRVADMCREAGALLILD--TSGGGLSHITSGV Mflv_4987|M.gilvum_PYR-GCK GIVVASGSLPPGVPPDFYQRVADICSDVGAMLVLD--TSGGGLRHVTSGV Mb2054c|M.bovis_AF2122/97 AFVVASGSLPPGVAADYYQRVADICRRSSTPLILD--TSGGGLQHISSGV Rv2029c|M.tuberculosis_H37Rv AFVVASGSLPPGVAADYYQRVADICRRSSTPLILD--TSGGGLQHISSGV MMAR_3482|M.marinum_M QFVVASGSLPPGVPADFYQRVAEACRGLGARLILD--TSGGGLSHISAGV MSMEG_3947|M.smegmatis_MC2_155 EFVVASGSLPPGVDPRFYQQIADMCRESGVPLILD--TSGGGLSHIESGV TH_1728|M.thermoresistible__bu QFLVASGSLPPGVPADFYQRVADLCRELGVLLILD--SSGGGLTQVRYGA MAV_0347|M.avium_104 SIQLQQ-------PAATALEAAQRARQRGLRVVADGVPAPQVRADLLATL MUL_4435|M.ulcerans_Agy99 AAAREPGCLAVAALLDAYRAAATVSFDPNVRPSLR---ADPDLTRERIQR * . . : Mvan_1394|M.vanbaalenii_PYR-1 YLLKPSVRELRECVGRPLPTEAEQLAAAHELIDRGIARIVVVSLGAQGAL Mflv_4987|M.gilvum_PYR-GCK HLLKPSIRELRECLDRPLHTEPEQIAAARELIDRGAAKVVVVSLGADGAL Mb2054c|M.bovis_AF2122/97 FLLKASVRELRECVGSELLTEPEQLAAAHELIDRGRAEVVVVSLGSQGAL Rv2029c|M.tuberculosis_H37Rv FLLKASVRELRECVGSELLTEPEQLAAAHELIDRGRAEVVVVSLGSQGAL MMAR_3482|M.marinum_M YLLKASVRELRECVGRPLVTEAEQLAAASELVETGRAEVVVVSLGSDGAL MSMEG_3947|M.smegmatis_MC2_155 FVLKPSLRELRECTGKELTTEREQVAAARDLIDRGVTDVVIVSLGGDGAL TH_1728|M.thermoresistible__bu FLVKPSKRELREYVGRDIPTTADQIAAAHELIDRGVTQAVVVSLGADGAL MAV_0347|M.avium_104 DVLRADATEASIIAGTEITTVEQAFELADHLLSGG-PELVALAVPDVGDL MUL_4435|M.ulcerans_Agy99 LVERSDIIKASAEDLHWIDPTQPPEQTARAWLACG-PAIVALTFGDQSAV : :.. : : . * : * . * ::. . : Mvan_1394|M.vanbaalenii_PYR-1 LAASSHSERFPALPVAAV-SGIGAGDAMVAGITVGLAEGWTLDRAVRYGI Mflv_4987|M.gilvum_PYR-GCK LVTPDDSERLSAVPMTSV-SCVGAGDALVAGVAVGLARRWPLGRAVRFGI Mb2054c|M.bovis_AF2122/97 LATRHASHRFSSIPMTAV-SGVGAGDAMVAAITVGLSRGWSLIKSVRLGN Rv2029c|M.tuberculosis_H37Rv LATRHASHRFSSIPMTAV-SGVGAGDAMVAAITVGLSRGWSLIKSVRLGN MMAR_3482|M.marinum_M LATRRARHRFRAVEMRGG-SGVGAGDAMVAAITVGLARGWPLVKSVRLGI MSMEG_3947|M.smegmatis_MC2_155 MVTARQSQRFKAVPVASG-SGVGAGDAMVAAITVGLSRGWPLPKSVRYGI TH_1728|M.thermoresistible__bu LATADVDQKFEAIDVPVVLSGVGAGDAMVAGITVALSRRWSLSDAVRYGV MAV_0347|M.avium_104 LTWRGGSELFEFADVEVV-DPTGAGDAFVAGLVAALREGAAPREAGRRAA MUL_4435|M.ulcerans_Agy99 AFCAAGPASMPAQPVRVV-DTVGAGDAFMAGLLDTLWEQGLLDADRRTEL : : . *****::*.: * . * Mvan_1394|M.vanbaalenii_PYR-1 AAATAKLQTPATSVFDRADVEHHFAEQLAPSGT----------------- Mflv_4987|M.gilvum_PYR-GCK AAASAKLQTPGTAAFHRDDVERYFVTQAAHSEA----------------- Mb2054c|M.bovis_AF2122/97 AAGAAMLLTPGTAACNRDDVERFFELAAEPTEVGQDQYVWHPIVNPEASP Rv2029c|M.tuberculosis_H37Rv AAGAAMLLTPGTAACNRDDVERFFELAAEPTEVGQDQYVWHPIVNPEASP MMAR_3482|M.marinum_M AAGAAMLLTPGTQACERADVERLFEHVAEPVEVA---------------- MSMEG_3947|M.smegmatis_MC2_155 AAGAAMLLTPGTAVCRRAEVERLFALAAEPEDLTSGW------------- TH_1728|M.thermoresistible__bu ATGSAMLLTPGTAPCRPEDVERLFAQAAPPVDVTRSPARN---------- MAV_0347|M.avium_104 AAAGATVQRLG----GRPDLTGLRA------------------------- MUL_4435|M.ulcerans_Agy99 RKIGVSALTSALEVAALTSALTVARAGADLPYRADLRQSR---------- . . .