For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDTDVVVVGAGPTGLTLACALRLHGLTVQVVDRAAGPATTSRANFLHARGSEVLGRIGALGTLPDESLRA MRITNYLGDRPLVTLEFGDPRMRTAAPPMVISQAKVEASLRSRLADLGAEPQWGNGLAALHRNDDTVVAE LDDGTSVEARWLVGCDGTASTTRKLAGIGFPGVKLTERWLLADLHLDWDLDRGGTTGWIHPGGLLGAMPM PDSSGAHDLWRVFAYDPGHTEKPAESEILERMRQVIPQRSGRRVHVGDPEWLSVFTVHRRLADRYRQGRI LIAGDAAHAHAPFGGQGMLTGIGDAENLAFKLALVTRGLAADPFVDTYEAERRPLATEVLRGTSAVTRVN IAGNPVGRFLRDRVAPKVFGLAPVQRWTTYTASQLWVSYRKGPLGGRGPKPRAGDRIPDVACVRPDGTPS LLHRELSGRWALLAPPDAPAGCADVARRHLGDFVEPLTFDGDEAMLIRPDGHLAWRGDAGDADGVNLWLT RALTTGNAR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0779 | - | - | 100% (500) | monooxygenase, FAD-binding |
M. vanbaalenii PYR-1 | Mvan_2422 | - | 1e-40 | 32.93% (495) | hypothetical protein Mvan_2422 |
M. vanbaalenii PYR-1 | Mvan_4245 | mhpA | 1e-34 | 33.60% (375) | 3-(3-hydroxyphenyl)propionate hydroxylase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0576c | - | 2e-07 | 28.49% (179) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_5009 | - | 0.0 | 70.20% (500) | monooxygenase, FAD-binding |
M. tuberculosis H37Rv | Rv0561c | - | 2e-07 | 28.49% (179) | oxidoreductase |
M. leprae Br4923 | MLBr_02276 | - | 2e-06 | 26.91% (223) | putative FAD-linked oxidoreductase |
M. abscessus ATCC 19977 | MAB_3483 | - | 1e-50 | 33.07% (505) | hypothetical protein MAB_3483 |
M. marinum M | MMAR_4271 | - | 5e-47 | 32.29% (511) | hypothetical protein MMAR_4271 |
M. avium 104 | MAV_2736 | - | 6e-54 | 34.27% (499) | hypothetical protein MAV_2736 |
M. smegmatis MC2 155 | MSMEG_1499 | - | 0.0 | 72.55% (499) | oxygenase |
M. thermoresistible (build 8) | TH_4641 | - | 1e-162 | 59.02% (510) | PUTATIVE oxygenase |
M. ulcerans Agy99 | MUL_2358 | - | 4e-11 | 26.09% (368) | FAD-dependent oxidoreductase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_5009|M.gilvum_PYR-GCK -------MPGAHRSDVVVVGAGPTGLTLACCLRLHGVSVRVLDAAAGPAT MSMEG_1499|M.smegmatis_MC2_155 --------MAATDCDVIVVGAGPTGLTLACSLRLHGLSVRVLDRAAGPAT Mvan_0779|M.vanbaalenii_PYR-1 ----------MTDTDVVVVGAGPTGLTLACALRLHGLTVQVVDRAAGPAT TH_4641|M.thermoresistible__bu -------MARETTTDVVVVGAGPVGLAVACGLLAHGLDVRVIDKAPAPAT MMAR_4271|M.marinum_M ----------MADHAVVVVGAGPTGLMLAGELALAGVDVAVVERRVSQDL MAV_2736|M.avium_104 MRGVRFSERSVRGHAVLVAGAGPTGLMLAGELGLAGVDVALVERRADQQL MAB_3483|M.abscessus_ATCC_1997 ----------MTEHAVVIAGGGPTGLMLAGELALAGADVAIVERRTTHEL Mb0576c|M.bovis_AF2122/97 -------MSVDDSADVVVVGAGPAGSAAAAWAARAGRDVLVIDTATFPRD Rv0561c|M.tuberculosis_H37Rv -------MSVDDSADVVVVGAGPAGSAAAAWAARAGRDVLVIDTATFPRD MLBr_02276|M.leprae_Br4923 -------MRVETSADVVVVGAGPAGSAAATWAARAGNDVIVIDSVCFPRD MUL_2358|M.ulcerans_Agy99 -------------MRVAVCGAGIAGLALAERMSALGAEVVFVERSPGPPN * : *.* .* * * * .:: Mflv_5009|M.gilvum_PYR-GCK T-SRANFLHARGSEVLDRMGALGTLPQESLRALRI-TNYLGDRPLATLEF MSMEG_1499|M.smegmatis_MC2_155 T-SRANFLHARGSEVLNRIGALGTLPDESLRAMRI-TNYLGDRPVMTLTF Mvan_0779|M.vanbaalenii_PYR-1 T-SRANFLHARGSEVLGRIGALGTLPDESLRAMRI-TNYLGDRPLVTLEF TH_4641|M.thermoresistible__bu T-SRANFLHARGSEVLDRLGALGGLPERSVRAMQI-TTHLGGEPVMRMQF MMAR_4271|M.marinum_M VGSRAGGLHSRTIEVLDQRGIADRFLAQGTATQ------VARFAAIPLDI MAV_2736|M.avium_104 IGSRAGGLHARTLEILDQRGIVDRFLAEGQVAQ------VAGFAQIRLDI MAB_3483|M.abscessus_ATCC_1997 DGSRAAGMTSRTLEVLDQRGILDRFTPQGFSAP------VAHFSALLLDM Mb0576c|M.bovis_AF2122/97 K-PCGDGLTPRAVAELHQLGLGKWLADHIRHRG---LRMSGFGGEVEVDW Rv0561c|M.tuberculosis_H37Rv K-PCGDGLTPRAVAELHQLGLGKWLADHIRHRG---LRMSGFGGEVEVDW MLBr_02276|M.leprae_Br4923 K-ACGDGLTPRAVAELKRLGLDDWLNTRIRHRG---LRMSGFGGEVEVDW MUL_2358|M.ulcerans_Agy99 Q-GAMIDLFGAGYEAADAIGILDAIRDVSYPIGDTGLVDELGRRRAGLPY : * : : Mflv_5009|M.gilvum_PYR-GCK GDPGMRTAAPPMVVSQAKVEAALRARLADLDVEPEWGRKVIDVREDADG- MSMEG_1499|M.smegmatis_MC2_155 GDPGMRTAAPPMVVSQARVEAALRARLAQLGVEPEWGRKVAGVRQAGDR- Mvan_0779|M.vanbaalenii_PYR-1 GDPRMRTAAPPMVISQAKVEASLRSRLADLGAEPQWGNGLAALHRNDDT- TH_4641|M.thermoresistible__bu GDPGMRTAAPPMVISQAEVEAALRNRLAELGGRVELDCPLTGLRQDAST- MMAR_4271|M.marinum_M SDFPTRHNYG-LALWQNRIERILAEWVAELRVRIYRGCEVTDITQDDNG- MAV_2736|M.avium_104 SDFPTRHPYG-LALWQNHIERILADWVGELGVPIYRGHRIATCTQDDTG- MAB_3483|M.abscessus_ATCC_1997 TDQPTRHTFG-LALLQYRIERTLSEWVGEHGVPIYRGREVTGFTSSDDA- Mb0576c|M.bovis_AF2122/97 PGPSFPSYGS--AVARLELDDRIRKVAEDTGARMLLGAKAVAVHHDSSRR Rv0561c|M.tuberculosis_H37Rv PGPSFPSYGS--AVARLELDDRIRKVAEDTGARMLLGAKAVAVHHDSSRR MLBr_02276|M.leprae_Br4923 PGPSFPSTSS--AVPRLELDDRIRKVAENSGARMLLGTKAVSVYHDSSRR MUL_2358|M.ulcerans_Agy99 GRIAKALEDRLCRITRTDLHKVLLDNLP-TNVDLRFGTSVSEVTHGDDR- : : :. : . Mflv_5009|M.gilvum_PYR-GCK -VVADLADGARVRGQWLVGCDGTTSVVR-RQTGIEFPGVRLSERFLLADI MSMEG_1499|M.smegmatis_MC2_155 -VVADLADGAQVSGQWLVGCDGTSSATR-EQVGIPFPGVKLSERFLLADI Mvan_0779|M.vanbaalenii_PYR-1 -VVAELDDGTSVEARWLVGCDGTASTTR-KLAGIGFPGVKLTERWLLADL TH_4641|M.thermoresistible__bu -VTAGIGGGGELRGRWLVGCDGTGSSTR-KSVGIGYPGARLSERFLLADV MMAR_4271|M.marinum_M -VDLTLSDGPPLRADYVVGCDGGRSLVR-RAVGIDFPGWDPTTSSLIAEV MAV_2736|M.avium_104 -VDVVASDGRTLRGQYLVGCDGGRSVIR-KAAGIDFPGWEATTSYLLAEA MAB_3483|M.abscessus_ATCC_1997 -VRVELSDGSTLRAQYLVGCDGGRSLTR-KIAGIDFPGWDPSTSCLVADV Mb0576c|M.bovis_AF2122/97 VVSLTLADGTEVGCRQLIVADGARSPLG-RKLGRRWHRETVYGVAVRGYL Rv0561c|M.tuberculosis_H37Rv VVSLTLADGTEVGCRQLIVADGARSPLG-RKLGRRWHRETVYGVAVRGYL MLBr_02276|M.leprae_Br4923 AASVTLADGTEVGCRQLIIADGARSPLG-RKLGRSWHQKTVYGVAARGYL MUL_2358|M.ulcerans_Agy99 -AVVTLDDGARLDVDLLVGADGIHSTVRALAFGAEVQYLRYLGFHFAAFV . .* : :: .** * * . Mflv_5009|M.gilvum_PYR-GCK HLDWAVDRAGTTGWIHPDGVVGAMPMPSTDGRDDLWRLFVYDPSLDRKPT MSMEG_1499|M.smegmatis_MC2_155 HLDWAVDRGGTTGWIHPDGVVGAMPMPSGDGRNDLWRLFVYDPALNRKPS Mvan_0779|M.vanbaalenii_PYR-1 HLDWDLDRGGTTGWIHPGGLLGAMPMPDSSGAHDLWRVFAYDPGHTEKPA TH_4641|M.thermoresistible__bu YLDWRLDRSGTTGWIHPDGMVGAMPMPDG-----LWRIIAYDPGPGDLDQ MMAR_4271|M.marinum_M EVAVGSESGPNLGEVRHDALGVHGFTRLPDG--GPLRVVVTERQLDAGGE MAV_2736|M.avium_104 EMDWRTGQPPQWG-IHHDSLGVHALSETEPA--GGVRVLVTERQLRSAAE MAB_3483|M.abscessus_ATCC_1997 QMTEE----PEWGIHRQGAL--HSIFKFEED--GPVRVLVTEAQLGRREE Mb0576c|M.bovis_AF2122/97 STAYS----------DDPWLTSHLELRSPDGAVLPGYGWIFPLGNGE--- Rv0561c|M.tuberculosis_H37Rv STAYS----------DDPWLTSHLELRSPDGAVLPGYGWIFPLGNGE--- MLBr_02276|M.leprae_Br4923 TTPRS----------DDLWLTSHLELRSPDGAVLPGYGWIFPLGNGE--- MUL_2358|M.ulcerans_Agy99 FDASDMDDTAGDHVVITDTVDRQLGLYALRNGQTAVFAAYRAADPEPPPD : Mflv_5009|M.gilvum_PYR-GCK DSEILDRISELVPYRTGRRVKIGDAEWLSMFTVHRRLADT-YRRGRVLIA MSMEG_1499|M.smegmatis_MC2_155 DSEILQRIEQIVPYRTGRAITIGQPEWLSMFTVHRRLAQS-YRRGRVLIA Mvan_0779|M.vanbaalenii_PYR-1 ESEILERMRQVIPQRSGRRVHVGDPEWLSVFTVHRRLADR-YRQGRILIA TH_4641|M.thermoresistible__bu G-----ALERLLYERTGHRVKVTGTVWQSEFRVHRRLADT-YRRGRVFIA MMAR_4271|M.marinum_M PS--LGDLSAALTAVYGTDYGIHSPTWISRFTDLTRQAAT-YRQGRVLIA MAV_2736|M.avium_104 PN--LDDLRQALIAVYRTDYGIHSPRWISRFTDAARQAAR-YRDRRVLLA MAB_3483|M.abscessus_ATCC_1997 PT--LRDLSEALLSARGTDYGIHSPTWISRFTDVTRQAAT-YRKGRVLLA Mb0576c|M.bovis_AF2122/97 -----VNIGVGALSTSRRPADLALRPLISYYTDLRRDEWG-FTGQ----P Rv0561c|M.tuberculosis_H37Rv -----VNIGVGALSTSRRPADLALRPLISYYTDLRRDEWG-FTGQ----P MLBr_02276|M.leprae_Br4923 -----VNIGVGALSTSKRPADLALRSLISYYTDLRRHEWG-FSGQ----P MUL_2358|M.ulcerans_Agy99 ARAALRDRFAGMGWLVPEVLERCPPSGDIYFGQVAQVEMPRWSTNRVVLV : : : Mflv_5009|M.gilvum_PYR-GCK GDAAHVHAPFGGQGMLTGIGDAENVGFKLALVVRGLAADDLLDTYEAERR MSMEG_1499|M.smegmatis_MC2_155 GDAAHAHAPFGGQGMLTGIGDAENLAFKLALVIRGLAADALIDTYEAERR Mvan_0779|M.vanbaalenii_PYR-1 GDAAHAHAPFGGQGMLTGIGDAENLAFKLALVTRGLAADPFVDTYEAERR TH_4641|M.thermoresistible__bu GDAAHAHAPFGGQGMLTGLGDAENLAFKLALVIRGYAGPALLDTYEAERR MMAR_4271|M.marinum_M GDAAHVHDPVGGQGLNTGVQDAVNLGWKLAQVVNRRSPESLLDTYHAERH MAV_2736|M.avium_104 GDAAHIHHPVGGQGLNTGVQDAVNLGWKLALVVGGASPPALLDTYHAERH MAB_3483|M.abscessus_ATCC_1997 GDAAHVHFPIGGQGLNTGMQDAVNLGWKLAQVVNGTSPENLLDTYHAERH Mb0576c|M.bovis_AF2122/97 RAVSSALLPMGG--AVSGVAGSNWMLIGDAAACVNPLNGEGID-YGLETG Rv0561c|M.tuberculosis_H37Rv RAVSSALLPMGG--AVSGVAGSNWMLIGDAAACVNPLNGEGID-YGLETG MLBr_02276|M.leprae_Br4923 RAVSSALLPMGG--AVSGVAGPNWMLIGDAAACVNPLNGEGID-YGLETG MUL_2358|M.ulcerans_Agy99 GDACSAGSPLTGPGASLALAGAYVLSEQLRRTS---SVERALDFYERLWS .. *. * .: .. : . :* * Mflv_5009|M.gilvum_PYR-GCK PLATQVLRGTSAITRVNVAGNPIVRFLRDRVAPRVFGLPAVQRWTTYTAS MSMEG_1499|M.smegmatis_MC2_155 FLATEVLRGTSAITRVNVASNPVGRFLRDRVATRIFGLPVVQRWTTYTAS Mvan_0779|M.vanbaalenii_PYR-1 PLATEVLRGTSAVTRVNIAGNPVGRFLRDRVAPKVFGLAPVQRWTTYTAS TH_4641|M.thermoresistible__bu PLATEVLRNTSAATKLNIADRGVGRFLRDRVVLPLLALPSVQRRLTYQTS MMAR_4271|M.marinum_M PVAARVLRTTMAQVALRRLDYRKKALS--DTISELLMMDEPRKRFAAMMS MAV_2736|M.avium_104 PVGERVLRNAIAQMALLRPDERTRALR--DLVTELLGMDEPRKRFAAMIS MAB_3483|M.abscessus_ATCC_1997 PVAARVLHNTMAQTALIRPGERVDALR--DIMSDLLTLDMPRRRIAAMMS Mb0576c|M.bovis_AF2122/97 RLAAELLDSRDLAR----------------LWPSLLADRYGRGFSVARRL Rv0561c|M.tuberculosis_H37Rv RLAAELLDSRDLAR----------------LWPSLLADRYGRGFSVARRL MLBr_02276|M.leprae_Br4923 RLAAELLDLRDLSY----------------VWPSLLQQHYGRGFSVARRL MUL_2358|M.ulcerans_Agy99 PTVEEKQESARGLR--------------LDAVAVVLTALDSPRRAALHLA . :: . Mflv_5009|M.gilvum_PYR-GCK QLWVSYRNGPLGGRGS---KPRPGDRIDDAPCSRPDGTATRLHGELGGRW MSMEG_1499|M.smegmatis_MC2_155 QLWVSYRKGPLGGHGR---RPRLGDRIGDRPCTRADGAATRLHSELAGRW Mvan_0779|M.vanbaalenii_PYR-1 QLWVSYRKGPLGGRGP---KPRAGDRIPDVACVRPDGTPSLLHRELSGRW TH_4641|M.thermoresistible__bu QLWVTYRGGPLAPRTVSMTTPRPGDRVPDQRCVRDDGHISRLYEQLGGRW MMAR_4271|M.marinum_M GLDIRYHLGGG--------HPLLGRRMPDLDLTTADGPRRVFTHLHAARP MAV_2736|M.avium_104 GLDVRYDLGPG--------HPLLGRRMPDLDLVTADGASRVFALLRNARP MAB_3483|M.abscessus_ATCC_1997 GLDIHYDLGPG--------HPLLGRRMPDLEVRTAQGPRCVFTLLREGRG Mb0576c|M.bovis_AF2122/97 ALLLTFP-----------------------RFLPTTGPITMRSTALMN-- Rv0561c|M.tuberculosis_H37Rv ALLLTFP-----------------------RFLPTTGPITMRSTALMN-- MLBr_02276|M.leprae_Br4923 ALLLTFK-----------------------RCLPAIGPSAMRSTSLIT-- MUL_2358|M.ulcerans_Agy99 PADQPIR------------------------------------------- Mflv_5009|M.gilvum_PYR-GCK ALLLPRG--VPAVG------AAAVRGPAGYLADHVVTLH---HDRDDVML MSMEG_1499|M.smegmatis_MC2_155 ALLWPRD--APAPG------ASLLAR----LGDFGVTLR---HDGAEAML Mvan_0779|M.vanbaalenii_PYR-1 ALLAPPD--APAGC------ADVARR---HLGDFVEPLT---FDGDEAML TH_4641|M.thermoresistible__bu AVLEPGSGRHHREG------PGLLGTAHTFLGEYVVGLRGAEMRGCDAFL MMAR_4271|M.marinum_M VLLNLAEPGRFDIAGWRHRVLLIDAKYV---GVWELPVLG-AIAAPAAAL MAV_2736|M.avium_104 VLLNFAGAGRRSVAGWADRVRVVDAKCV---ADWELPVLG-RVSAPPAVL MAB_3483|M.abscessus_ATCC_1997 VLLNLGTP-ITGASGWSHRVDVVEAEYLDAEGTFELPVIG-MVEAPHAVL Mb0576c|M.bovis_AF2122/97 ------------------------------------------IAVRVMSN Rv0561c|M.tuberculosis_H37Rv ------------------------------------------IAVRVMSN MLBr_02276|M.leprae_Br4923 ------------------------------------------IAVRVMAN MUL_2358|M.ulcerans_Agy99 -------------------------------------------------- Mflv_5009|M.gilvum_PYR-GCK VRPDAHLAWRGAHDDPTGLDRWLATALHPGGTQ--------- MSMEG_1499|M.smegmatis_MC2_155 IRPDAHLAWRGAPDDTAGLDHWLAKALGSGAVR--------- Mvan_0779|M.vanbaalenii_PYR-1 IRPDGHLAWRGDAGDADGVNLWLTRALTTGNAR--------- TH_4641|M.thermoresistible__bu VRPDGHLAWRGR--DATDLADWLKSALTVGRVR--------- MMAR_4271|M.marinum_M IRPDGYVAWVGDDLTDRGLFDALTAWFGRPAVPSPRLRASAP MAV_2736|M.avium_104 IRPDGHVAWAGD-PNDPGLHDALTTWCGPPAAGG-------- MAB_3483|M.abscessus_ATCC_1997 IRPDGYVAWVGN-GTTAGLNGALQRWFGPPRYSGGGS----- Mb0576c|M.bovis_AF2122/97 LVTDDDRDWVARVWRGGGQLSRLVDRRPPFS----------- Rv0561c|M.tuberculosis_H37Rv LVTDDDRDWVARVWRGGGQLSRLVDRRPPFS----------- MLBr_02276|M.leprae_Br4923 LVTDDDADWVARVWRSGGWASWLVDRRPPFS----------- MUL_2358|M.ulcerans_Agy99 ------------------------------------------