For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VHVDVMTTPQPLRSTGDLARRTQGAGFDGMLFTETGRTAYLNVAAAALAAPGLQLSTGVAVAFPRSPFVT AASAWELQEASGGNFRLGLGTQVRTHVVRRYGVEFEHPGPRLRDYVLAVKACFGAFRTGTLDHHGDFYNL DFITPQWSAGPIDAPDPKVDVAAVNPWMLRMAGEVADGVHVHPLGEPGYIARHVIPKVAEGAQKSGRSPS EIALIVPVMTVVGDTDEERHRERELVRASMSFYGSTPNYAFIWDEAGFEGTTARIREKQKAGDIKGMAAQ ITDEHIATFATESTWDGLADALKAKYGGTATRIVLYNALANPERFERYGIVAQRLSNAQQA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_5162 | - | - | 100% (341) | luciferase family protein |
M. gilvum PYR-GCK | Mflv_4326 | - | 5e-42 | 31.21% (298) | putative oxidoreductase |
M. gilvum PYR-GCK | Mflv_4500 | - | 2e-41 | 35.12% (299) | hypothetical protein Mflv_4500 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1395 | - | 4e-46 | 33.88% (307) | oxidoreductase |
M. tuberculosis H37Rv | Rv1360 | - | 4e-46 | 33.88% (307) | oxidoreductase |
M. leprae Br4923 | MLBr_00348 | - | 4e-10 | 26.71% (292) | putative coenzyme F420-dependent oxidoreductase |
M. abscessus ATCC 19977 | MAB_3914c | - | 9e-47 | 34.65% (329) | oxidoreductase |
M. marinum M | MMAR_1372 | - | 1e-164 | 81.79% (335) | hypothetical protein MMAR_1372 |
M. avium 104 | MAV_2121 | - | 1e-167 | 81.66% (338) | hypothetical protein MAV_2121 |
M. smegmatis MC2 155 | MSMEG_0341 | - | 8e-51 | 36.91% (298) | hypothetical protein MSMEG_0341 |
M. thermoresistible (build 8) | TH_0425 | - | 1e-160 | 80.06% (336) | CONSERVED HYPOTHETICAL ALANINE AND PROLINE-RICH PROTEIN |
M. ulcerans Agy99 | MUL_2504 | - | 1e-163 | 81.19% (335) | hypothetical protein MUL_2504 |
M. vanbaalenii PYR-1 | Mvan_1168 | - | 0.0 | 90.45% (335) | luciferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb1395|M.bovis_AF2122/97 -----MGGARRLKLDGSIPNQLARAADAAVALERNGFDGGWTAEAS-HDP Rv1360|M.tuberculosis_H37Rv -----MGGARRLKLDGSIPNQLARAADAAVALERNGFDGGWTAEAS-HDP MSMEG_0341|M.smegmatis_MC2_155 -----MAGAEEAGISG-LLGQAARAQD-------IGFDGIWSTDVD-RDP MAB_3914c|M.abscessus_ATCC_199 -------MLIDVTLTTGLNTMAAEAAEAE----ESGYAGIWTFEGA-HDP Mflv_5162|M.gilvum_PYR-GCK ----------MHVDVMTTPQPLRSTGDLARRTQGAGFDGMLFTETG-RTA Mvan_1168|M.vanbaalenii_PYR-1 ----------MHVDVMTTPQPLQSTGELARRTQEVGFSGLLFTETG-RTA MMAR_1372|M.marinum_M ----------MHIDVMTIPQPLAQIGDLARRTQAAGFSGLLFTETG-RTA MUL_2504|M.ulcerans_Agy99 ----------MHIDVMTIPQPLAQIGDLARRTQAAGLSGLLFTETG-RTA MAV_2121|M.avium_104 ----------MHVDAMTVPQPLGQIGDLARRTQSAGFSGLLFTETG-RTA TH_0425|M.thermoresistible__bu ----------VHVDVMVVPQPLGRVGDTARQVQRCGFSGLLLTETG-RTA MLBr_00348|M.leprae_Br4923 MVERANAMKLGLQLGYWAAQPPGNAAELVAAAEGAGFDAVFTGEAWGSDA : * . : . Mb1395|M.bovis_AF2122/97 FLPLLLAAEHTSRLELGTNIAVAFARNPMIVANVGWDLQTYSKGRLILGL Rv1360|M.tuberculosis_H37Rv FLPLLLAAEHTSRLELGTNIAVAFARNPMIVANVGWDLQTYSKGRLILGL MSMEG_0341|M.smegmatis_MC2_155 FLPLAVAAMTTTNVQLGTGIAVAFARNPMTTAMAANDLQEMSDGRFVLGL MAB_3914c|M.abscessus_ATCC_199 FLPLLLAAEHTKNVMLGTSIAVAFARNPMLLATIGWDLQAYSGGRFILGL Mflv_5162|M.gilvum_PYR-GCK YLNVAAAALAAPGLQLSTGVAVAFPRSPFVTAASAWELQEASGGNFRLGL Mvan_1168|M.vanbaalenii_PYR-1 YLSAAVAAHAAPGLELSTGVAVAFPRSPFVTAASAWELQEATGGKFRLGL MMAR_1372|M.marinum_M YLNAAIASQAAPGLELSTGVAVAFPRSPFVTAATAWELQEATGGKFRLGL MUL_2504|M.ulcerans_Agy99 YLNAAIASQAAPGLELSTGVAVAFPRSPFVTAATAWELQEATGGKFRLGL MAV_2121|M.avium_104 YLNAAVASQAAPGLELSTGVAVAFPRSPFVTAAVAWELQEATKGRFRLGL TH_0425|M.thermoresistible__bu YLNAAVASQAAPGLELSTGVAVAFPRSPFVTAAAAWELQEATGGKFRLGL MLBr_00348|M.leprae_Br4923 YTPLAWWGSSTQRVRLGTSVVQLSARTPTACAMAALTLDHLSGGRHILGL : . : : *.*.:. .*.* * . *: : *. *** Mb1395|M.bovis_AF2122/97 GTQIRPHIEKRFSMPWGHPARRMREFVAALRAIWLAWQDGTKLCFEGEFY Rv1360|M.tuberculosis_H37Rv GTQIRPHIEKRFSMPWGHPARRMREFVAALRAIWLAWQDGTKLCFEGEFY MSMEG_0341|M.smegmatis_MC2_155 GTQIQAHIERRFSMPWSAPAERMSEYVNAIRAIWRSWRTGERLDFRGDHY MAB_3914c|M.abscessus_ATCC_199 GTQIKPHITRRFDMPWSSPAARMRDMVLAVRAIWQSWQERGALDYRGDFY Mflv_5162|M.gilvum_PYR-GCK GTQVRTHVVRRYGVEFEHPGPRLRDYVLAVKACFGAFRTG-TLDHHGDFY Mvan_1168|M.vanbaalenii_PYR-1 GTQVRTHVVRRYGADFEHPGPRLRDYVLAVKACFAAFRTG-KLDHHGQFY MMAR_1372|M.marinum_M GTQVRTHVVRRYGMAFERPGPRLRDYVLAVKACFSAFRTG-TLDHHGEFY MUL_2504|M.ulcerans_Agy99 GTQVRTHVVRRYGMAFERPGPRLRDYVLAVKACFSAFRTG-TLDHHGEFY MAV_2121|M.avium_104 GTQVRTHVVRRYGAAFERPGPRLRDYLLAVKACFAAFRSG-TLEHHGDFY TH_0425|M.thermoresistible__bu GTQVRTHVVRRYGMPFDRPGPRLRDYVRAVKACFTAFRTG-TLDHHGEFY MLBr_00348|M.leprae_Br4923 GVSGPQVVEGWYGQPFPKPLSRTREYIDIVRQVWAR---EAPVVSDGQHY *.. : :. : * * : : :: : : *:.* Mb1395|M.bovis_AF2122/97 THKIMTPMFT-----PEP---QPYPVPRVFIAAVGEAMTEMCGEVADGHL Rv1360|M.tuberculosis_H37Rv THKIMTPMFT-----PEP---QPYPVPRVFIAAVGEAMTEMCGEVADGHL MSMEG_0341|M.smegmatis_MC2_155 QHTLMTPMFT-----PTP---HPHGDPKIVISAVGPRMTRVAARDADGLL MAB_3914c|M.abscessus_ATCC_199 QNTLMTPMFM-----PDPAEVSAFGPPPIWLAGVGTGMTEVAGEVADGFM Mflv_5162|M.gilvum_PYR-GCK NLDFITPQWS-----AGP---IDAPDPKVDVAAVNPWMLRMAGEVADGVH Mvan_1168|M.vanbaalenii_PYR-1 NLDFITPQWS-----AGP---IDAPDPKVDVAAVNPWMLRMAGEVADGVH MMAR_1372|M.marinum_M DLDFITPQWS-----AGP---IDAPDPKVDVAAVNPWMLRMAGEVADGVH MUL_2504|M.ulcerans_Agy99 DLDLITPQWS-----AGP---IDAPDPKVDIAAVNPWMLRMAGEVADGVH MAV_2121|M.avium_104 DLDFITPQWS-----PGP---IDAPDPKVDIAAVNPWMLRMAGEVADGVH TH_0425|M.thermoresistible__bu ELDFITPQWS-----PGP---IYAPDPKVDVAAVNPWMLRMAGEVADGVH MLBr_00348|M.leprae_Br4923 PLPLTGAGATGLGKALKPITHPLRADIPIMLGAEGPKNVALAAEICDGWL : . * : :.. . :... .** Mb1395|M.bovis_AF2122/97 GHPMVSKRYLTEVSVPALLRGLARSG--RDRSAFEVSCEVMVATGADDAE Rv1360|M.tuberculosis_H37Rv GHPMVSKRYLTEVSVPALLRGLARSG--RDRSAFEVSCEVMVATGADDAE MSMEG_0341|M.smegmatis_MC2_155 VHGFTTQRYLSEVTLPIVEEELRKVG--RRRADFTISYPGLIASGSTDEE MAB_3914c|M.abscessus_ATCC_199 SHPFCTPDYLAQVTRPALGRGALKSG--KALADIQIHHSPMIIIGRDDAE Mflv_5162|M.gilvum_PYR-GCK VHPLGEPGYIARHVIPKVAEGAQKSG--RSPSEIALIVPVMTVVGDTDEE Mvan_1168|M.vanbaalenii_PYR-1 VHPLGEPGYIARHVIPKIAEGAQNSG--RSPDDIAVIVPVMTIVGDTDEE MMAR_1372|M.marinum_M IHPLGELGYLTRHVVPNVAKGAAKAG--RSPADIAVIVPVMTIVGDSEEE MUL_2504|M.ulcerans_Agy99 IHPLGELGYLTRHVVPNVAKGAAKAG--RSPADIAVILPVMTIVGDSDEE MAV_2121|M.avium_104 VHPIGEPGYLARHVLPTVAEGAAKAG--RSPSDIAIIVPVMTIVGDSDEE TH_0425|M.thermoresistible__bu VHPIGEPGYLTRHVLPNVAAGAARSQ--RSPDDIALIVPVLTVVGDTDEE MLBr_00348|M.leprae_Br4923 PIFFSPR--MADMYNEWLDEGFARTGARRSREDFEICASAQIVVT---ED : :: : . : : : : Mb1395|M.bovis_AF2122/97 LAAACTATRKQIAFYG------STPAYRKVLEQHGWGDLHPELHRLSKLG Rv1360|M.tuberculosis_H37Rv LAAACTATRKQIAFYG------STPAYRKVLEQHGWGDLHPELHRLSKLG MSMEG_0341|M.smegmatis_MC2_155 LTRAVSAVRRQIAFYG------STPAYRHVLELHGWHDLHTELHRLSKAG MAB_3914c|M.abscessus_ATCC_199 LASARAAVRKQLAFYG------STPAYWPILELHGRAEMGPELKERSKQG Mflv_5162|M.gilvum_PYR-GCK RHRERELVRASMSFYG------STPNYAFIWDEAGFEGTTARIREKQKAG Mvan_1168|M.vanbaalenii_PYR-1 RHRERELVRASMSFYG------STPNYSFIWDEAGFEGTTARIRERQKAG MMAR_1372|M.marinum_M RAIERESVRASMAFYG------STPNYAFIWDEAGFEGTTARIREKQKAG MUL_2504|M.ulcerans_Agy99 RAIERESVRASMAFYG------STPNYAFIWDEAGFEGTTARIREKQKAG MAV_2121|M.avium_104 RDQQREAVRASMAFYG------STPNYAFIWDEAGFEGTTARIREKQKAG TH_0425|M.thermoresistible__bu RHTERERARAALSFYG------STPNYAFIWDEAGFEGTTARIREKQKAR MLBr_00348|M.leprae_Br4923 RAAAFAGIKPFLALYMGGMGAEGTNFHADVYRRMGYAEVVDEVTALFRSN : :::* .* : : * .: : Mb1395|M.bovis_AF2122/97 EWEAMGGLIDDEMLGAFAV-VGPVDTIAGALRNRCEGVVDR-----VLPI Rv1360|M.tuberculosis_H37Rv EWEAMGGLIDDEMLGAFAV-VGPVDTIAGALRNRCEGVVDR-----VLPI MSMEG_0341|M.smegmatis_MC2_155 DWTTMTGLIDDEVLNTFAA-VGEPTEAGAEVVTRFAGLVDRFTLLTPYPL MAB_3914c|M.abscessus_ATCC_199 EWEAMAALVDDDFVDTAAVTVTDPGQGARELQERYGDLVHR----LGFNT Mflv_5162|M.gilvum_PYR-GCK DIKGMAAQITDEHIATFAT-ESTWDGLADALKAKYGGTATRIVLYNALAN Mvan_1168|M.vanbaalenii_PYR-1 DVKGMAAQITDEHIAAFAT-ESTWDGLADALTAKYGGTATRVVLYNALAD MMAR_1372|M.marinum_M DFPAMMAQISDEHVDAFAT-ESSWDGLADALTDKYGGIATRLVMYNALGD MUL_2504|M.ulcerans_Agy99 DFPAMMAQISDEHIDAFAT-ESSWDGLADALTDKYGGIATRLVMYNALGD MAV_2121|M.avium_104 DYAGMAAQVSDDHIAVFAT-ESTWDGLADALIEKYSGTATRLVMYNSAAD TH_0425|M.thermoresistible__bu DHAGMAAVITDEHLAVFTT-ESTWDGLADALRARYGGVATRLVLYNAQNT MLBr_00348|M.leprae_Br4923 QKDKAAEIIPNELVDSTMI-VGDVDYVCKQIAAWSAAGVTM-----MMVS : : :: : : . Mb1395|M.bovis_AF2122/97 FMAASQECINAALQDFRR-- Rv1360|M.tuberculosis_H37Rv FMAASQECINAALQDFRR-- MSMEG_0341|M.smegmatis_MC2_155 GDEAAAAIVAGARAATARA- MAB_3914c|M.abscessus_ATCC_199 PYRPDRALLPELLAAFPTR- Mflv_5162|M.gilvum_PYR-GCK PERFERYGIVAQRLSNAQQA Mvan_1168|M.vanbaalenii_PYR-1 PERFERYGDVAQRLQR---- MMAR_1372|M.marinum_M PGRFERYGEVARRMHG---- MUL_2504|M.ulcerans_Agy99 PGRFERYGEVARRMHG---- MAV_2121|M.avium_104 PERFERYGEVARRIQHAVSG TH_0425|M.thermoresistible__bu PEQLERYGAVARQLSAD--- MLBr_00348|M.leprae_Br4923 ASSVEQVRDLAGLF------