For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
HVDVMTTPQPLQSTGELARRTQEVGFSGLLFTETGRTAYLSAAVAAHAAPGLELSTGVAVAFPRSPFVTA ASAWELQEATGGKFRLGLGTQVRTHVVRRYGADFEHPGPRLRDYVLAVKACFAAFRTGKLDHHGQFYNLD FITPQWSAGPIDAPDPKVDVAAVNPWMLRMAGEVADGVHVHPLGEPGYIARHVIPKIAEGAQNSGRSPDD IAVIVPVMTIVGDTDEERHRERELVRASMSFYGSTPNYSFIWDEAGFEGTTARIRERQKAGDVKGMAAQI TDEHIAAFATESTWDGLADALTAKYGGTATRVVLYNALADPERFERYGDVAQRLQR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1168 | - | - | 100% (337) | luciferase family protein |
M. vanbaalenii PYR-1 | Mvan_2020 | - | 2e-44 | 31.53% (314) | putative oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_1819 | - | 2e-42 | 34.55% (301) | hypothetical protein Mvan_1819 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3214 | - | 8e-47 | 63.76% (149) | hypothetical protein Mb3214 |
M. gilvum PYR-GCK | Mflv_5162 | - | 0.0 | 90.45% (335) | luciferase family protein |
M. tuberculosis H37Rv | Rv3192 | - | 8e-47 | 63.76% (149) | hypothetical protein Rv3192 |
M. leprae Br4923 | MLBr_00348 | - | 2e-09 | 26.03% (292) | putative coenzyme F420-dependent oxidoreductase |
M. abscessus ATCC 19977 | MAB_3914c | - | 5e-46 | 34.65% (329) | oxidoreductase |
M. marinum M | MMAR_1372 | - | 1e-166 | 82.99% (335) | hypothetical protein MMAR_1372 |
M. avium 104 | MAV_2121 | - | 1e-167 | 82.44% (336) | hypothetical protein MAV_2121 |
M. smegmatis MC2 155 | MSMEG_0341 | - | 6e-49 | 35.23% (298) | hypothetical protein MSMEG_0341 |
M. thermoresistible (build 8) | TH_0425 | - | 1e-160 | 80.30% (335) | CONSERVED HYPOTHETICAL ALANINE AND PROLINE-RICH PROTEIN |
M. ulcerans Agy99 | MUL_2504 | - | 1e-165 | 82.39% (335) | hypothetical protein MUL_2504 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3214|M.bovis_AF2122/97 ----------------MIPQPLSQLGDLARR---PGRRVLCSPKTA-APS Rv3192|M.tuberculosis_H37Rv ----------------MIPQPLSQLGDLARR---PGRRVLCSPKTA-APS Mvan_1168|M.vanbaalenii_PYR-1 ----------MHVDVMTTPQPLQSTGELARRTQEVGFSGLLFTETG-RTA Mflv_5162|M.gilvum_PYR-GCK ----------MHVDVMTTPQPLRSTGDLARRTQGAGFDGMLFTETG-RTA MMAR_1372|M.marinum_M ----------MHIDVMTIPQPLAQIGDLARRTQAAGFSGLLFTETG-RTA MUL_2504|M.ulcerans_Agy99 ----------MHIDVMTIPQPLAQIGDLARRTQAAGLSGLLFTETG-RTA MAV_2121|M.avium_104 ----------MHVDAMTVPQPLGQIGDLARRTQSAGFSGLLFTETG-RTA TH_0425|M.thermoresistible__bu ----------VHVDVMVVPQPLGRVGDTARQVQRCGFSGLLLTETG-RTA MAB_3914c|M.abscessus_ATCC_199 -----------MLIDVTLTTGLNTMAAEAAEAEESGYAGIWTFEGA-HDP MSMEG_0341|M.smegmatis_MC2_155 -------------MAGAEEAGISGLLGQAARAQDIGFDGIWSTDVD-RDP MLBr_00348|M.leprae_Br4923 MVERANAMKLGLQLGYWAAQPPGNAAELVAAAEGAGFDAVFTGEAWGSDA . * : . . Mb3214|M.bovis_AF2122/97 ISNATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGL Rv3192|M.tuberculosis_H37Rv ISNATVASPAAPGLELSTGIALAFPRGPFVPAAAAWELQEATSGKFQLGL Mvan_1168|M.vanbaalenii_PYR-1 YLSAAVAAHAAPGLELSTGVAVAFPRSPFVTAASAWELQEATGGKFRLGL Mflv_5162|M.gilvum_PYR-GCK YLNVAAAALAAPGLQLSTGVAVAFPRSPFVTAASAWELQEASGGNFRLGL MMAR_1372|M.marinum_M YLNAAIASQAAPGLELSTGVAVAFPRSPFVTAATAWELQEATGGKFRLGL MUL_2504|M.ulcerans_Agy99 YLNAAIASQAAPGLELSTGVAVAFPRSPFVTAATAWELQEATGGKFRLGL MAV_2121|M.avium_104 YLNAAVASQAAPGLELSTGVAVAFPRSPFVTAAVAWELQEATKGRFRLGL TH_0425|M.thermoresistible__bu YLNAAVASQAAPGLELSTGVAVAFPRSPFVTAAAAWELQEATGGKFRLGL MAB_3914c|M.abscessus_ATCC_199 FLPLLLAAEHTKNVMLGTSIAVAFARNPMLLATIGWDLQAYSGGRFILGL MSMEG_0341|M.smegmatis_MC2_155 FLPLAVAAMTTTNVQLGTGIAVAFARNPMTTAMAANDLQEMSDGRFVLGL MLBr_00348|M.leprae_Br4923 YTPLAWWGSSTQRVRLGTSVVQLSARTPTACAMAALTLDHLSGGRHILGL . : : *.*.:. .* * * . *: : *.. *** Mb3214|M.bovis_AF2122/97 GTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTG---TPDHHGE Rv3192|M.tuberculosis_H37Rv GTQVRKNVVHRYGMAFHRPGPRLR-YLLAVKACFAVFQTG---TPDHHGE Mvan_1168|M.vanbaalenii_PYR-1 GTQVRTHVVRRYGADFEHPGPRLRDYVLAVKACFAAFRTG---KLDHHGQ Mflv_5162|M.gilvum_PYR-GCK GTQVRTHVVRRYGVEFEHPGPRLRDYVLAVKACFGAFRTG---TLDHHGD MMAR_1372|M.marinum_M GTQVRTHVVRRYGMAFERPGPRLRDYVLAVKACFSAFRTG---TLDHHGE MUL_2504|M.ulcerans_Agy99 GTQVRTHVVRRYGMAFERPGPRLRDYVLAVKACFSAFRTG---TLDHHGE MAV_2121|M.avium_104 GTQVRTHVVRRYGAAFERPGPRLRDYLLAVKACFAAFRSG---TLEHHGD TH_0425|M.thermoresistible__bu GTQVRTHVVRRYGMPFDRPGPRLRDYVRAVKACFTAFRTG---TLDHHGE MAB_3914c|M.abscessus_ATCC_199 GTQIKPHITRRFDMPWSSPAARMRDMVLAVRAIWQSWQERG--ALDYRGD MSMEG_0341|M.smegmatis_MC2_155 GTQIQAHIERRFSMPWSAPAERMSEYVNAIRAIWRSWRTGE--RLDFRGD MLBr_00348|M.leprae_Br4923 GVSGPQVVEGWYGQPFPKPLSRTREYIDIVRQVWAREAPVVSDGQHYPLP *.. : :. : * * : :: : .. Mb3214|M.bovis_AF2122/97 FDNPDFITAQWSPAR---IDPPGP------------------------SP Rv3192|M.tuberculosis_H37Rv FDNPDFITAQWSPAR---IDPPGP------------------------SP Mvan_1168|M.vanbaalenii_PYR-1 FYNLDFITPQWSAGP---IDAPDPKVDVAAVNPWMLRMAGEVADGVHVHP Mflv_5162|M.gilvum_PYR-GCK FYNLDFITPQWSAGP---IDAPDPKVDVAAVNPWMLRMAGEVADGVHVHP MMAR_1372|M.marinum_M FYDLDFITPQWSAGP---IDAPDPKVDVAAVNPWMLRMAGEVADGVHIHP MUL_2504|M.ulcerans_Agy99 FYDLDLITPQWSAGP---IDAPDPKVDIAAVNPWMLRMAGEVADGVHIHP MAV_2121|M.avium_104 FYDLDFITPQWSPGP---IDAPDPKVDIAAVNPWMLRMAGEVADGVHVHP TH_0425|M.thermoresistible__bu FYELDFITPQWSPGP---IYAPDPKVDVAAVNPWMLRMAGEVADGVHVHP MAB_3914c|M.abscessus_ATCC_199 FYQNTLMTPMFMPDPAEVSAFGPPPIWLAGVGTGMTEVAGEVADGFMSHP MSMEG_0341|M.smegmatis_MC2_155 HYQHTLMTPMFTPTP---HPHGDPKIVISAVGPRMTRVAARDADGLLVHG MLBr_00348|M.leprae_Br4923 LTGAGATGLGKALKPITHPLRADIPIMLGAEGPKNVALAAEICDGWLPIF Mb3214|M.bovis_AF2122/97 AG----------PR------------------------------------ Rv3192|M.tuberculosis_H37Rv AG----------PR------------------------------------ Mvan_1168|M.vanbaalenii_PYR-1 LGEPGYIARHVIPKIAEGAQNSGRSPDDIAVIVPVMTIVGDTDEERHRER Mflv_5162|M.gilvum_PYR-GCK LGEPGYIARHVIPKVAEGAQKSGRSPSEIALIVPVMTVVGDTDEERHRER MMAR_1372|M.marinum_M LGELGYLTRHVVPNVAKGAAKAGRSPADIAVIVPVMTIVGDSEEERAIER MUL_2504|M.ulcerans_Agy99 LGELGYLTRHVVPNVAKGAAKAGRSPADIAVILPVMTIVGDSDEERAIER MAV_2121|M.avium_104 IGEPGYLARHVLPTVAEGAAKAGRSPSDIAIIVPVMTIVGDSDEERDQQR TH_0425|M.thermoresistible__bu IGEPGYLTRHVLPNVAAGAARSQRSPDDIALIVPVLTVVGDTDEERHTER MAB_3914c|M.abscessus_ATCC_199 FCTPDYLAQVTRPALGRGALKSGKALADIQIHHSPMIIIGRDDAELASAR MSMEG_0341|M.smegmatis_MC2_155 FTTQRYLSEVTLPIVEEELRKVGRRRADFTISYPGLIASGSTDEELTRAV MLBr_00348|M.leprae_Br4923 FSPRMADMYNEWLDEGFARTGARRSREDFEICASAQIVVT---EDRAAAF Mb3214|M.bovis_AF2122/97 -------------------------------------------------- Rv3192|M.tuberculosis_H37Rv -------------------------------------------------- Mvan_1168|M.vanbaalenii_PYR-1 ELVRASMSFYG------STPNYSFIWDEAGFEGTTARIRERQKAGDVKGM Mflv_5162|M.gilvum_PYR-GCK ELVRASMSFYG------STPNYAFIWDEAGFEGTTARIREKQKAGDIKGM MMAR_1372|M.marinum_M ESVRASMAFYG------STPNYAFIWDEAGFEGTTARIREKQKAGDFPAM MUL_2504|M.ulcerans_Agy99 ESVRASMAFYG------STPNYAFIWDEAGFEGTTARIREKQKAGDFPAM MAV_2121|M.avium_104 EAVRASMAFYG------STPNYAFIWDEAGFEGTTARIREKQKAGDYAGM TH_0425|M.thermoresistible__bu ERARAALSFYG------STPNYAFIWDEAGFEGTTARIREKQKARDHAGM MAB_3914c|M.abscessus_ATCC_199 AAVRKQLAFYG------STPAYWPILELHGRAEMGPELKERSKQGEWEAM MSMEG_0341|M.smegmatis_MC2_155 SAVRRQIAFYG------STPAYRHVLELHGWHDLHTELHRLSKAGDWTTM MLBr_00348|M.leprae_Br4923 AGIKPFLALYMGGMGAEGTNFHADVYRRMGYAEVVDEVTALFRSNQKDKA Mb3214|M.bovis_AF2122/97 -------------------------------------------------- Rv3192|M.tuberculosis_H37Rv -------------------------------------------------- Mvan_1168|M.vanbaalenii_PYR-1 AAQITDEHIAAFATESTWDG-LADALTAKYGGTATRVVLYNALADPERFE Mflv_5162|M.gilvum_PYR-GCK AAQITDEHIATFATESTWDG-LADALKAKYGGTATRIVLYNALANPERFE MMAR_1372|M.marinum_M MAQISDEHVDAFATESSWDG-LADALTDKYGGIATRLVMYNALGDPGRFE MUL_2504|M.ulcerans_Agy99 MAQISDEHIDAFATESSWDG-LADALTDKYGGIATRLVMYNALGDPGRFE MAV_2121|M.avium_104 AAQVSDDHIAVFATESTWDG-LADALIEKYSGTATRLVMYNSAADPERFE TH_0425|M.thermoresistible__bu AAVITDEHLAVFTTESTWDG-LADALRARYGGVATRLVLYNAQNTPEQLE MAB_3914c|M.abscessus_ATCC_199 AALVDDDFVDTAAVTVTDPGQGARELQERYGDLVHRLGFNTPYRPDRALL MSMEG_0341|M.smegmatis_MC2_155 TGLIDDEVLNTFAA-VGEPTEAGAEVVTRFAGLVDRFTLLTPYPLGDEAA MLBr_00348|M.leprae_Br4923 AEIIPNELVDSTMIVGDVDYVCKQIAAWSAAGVTMMMVSASSVEQVRDLA Mb3214|M.bovis_AF2122/97 --------------- Rv3192|M.tuberculosis_H37Rv --------------- Mvan_1168|M.vanbaalenii_PYR-1 RYGDVAQRLQR---- Mflv_5162|M.gilvum_PYR-GCK RYGIVAQRLSNAQQA MMAR_1372|M.marinum_M RYGEVARRMHG---- MUL_2504|M.ulcerans_Agy99 RYGEVARRMHG---- MAV_2121|M.avium_104 RYGEVARRIQHAVSG TH_0425|M.thermoresistible__bu RYGAVARQLSAD--- MAB_3914c|M.abscessus_ATCC_199 PELLA---AFPTR-- MSMEG_0341|M.smegmatis_MC2_155 AAIVAGARAATARA- MLBr_00348|M.leprae_Br4923 GLF------------