For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TETLGAPEPFLTDGHGGIVIAADRRGEPTARAVVFLHGGGQTRRSWDRAAAAVAQRGWQSVTVDMRGHGE SDWSPDGDYRVASFAADVREILAQLPPRPVLVGASLGGITAMLLAGELARGIASAVVLVDIVPDMDPTGA ERIHAFMADKMVDGFASLDEVADMIAEYNPHRPKPTDLDGLRKNLRHKGGRWYWHWDPRFIDGTAPHPPM EVTDTDRLHAAVGRIVDDGVPVLLVRGQVSDLVSRDRAAAFLSRFPQIDFVDVDGAGHMVAGDRNDLFAD AVLSFLTRREVAKP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4507 | - | - | 100% (295) | alpha/beta hydrolase fold |
M. gilvum PYR-GCK | Mflv_2096 | - | 1e-58 | 39.66% (290) | alpha/beta hydrolase fold |
M. gilvum PYR-GCK | Mflv_3026 | - | 1e-54 | 45.04% (282) | alpha/beta hydrolase fold |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3502c | bpoA | 1e-109 | 72.27% (256) | peroxidase BpoA |
M. tuberculosis H37Rv | Rv3473c | bpoA | 1e-109 | 72.27% (256) | peroxidase BpoA |
M. leprae Br4923 | MLBr_00862 | ephD | 1e-05 | 32.95% (88) | short chain dehydrogenase |
M. abscessus ATCC 19977 | MAB_2045 | - | 1e-55 | 43.42% (281) | putative hydrolase (alpha/beta fold) |
M. marinum M | MMAR_4960 | bpoA | 1e-121 | 72.44% (283) | peroxidase BpoA |
M. avium 104 | MAV_0677 | - | 1e-126 | 74.91% (283) | hydrolase, alpha/beta fold family protein |
M. smegmatis MC2 155 | MSMEG_5209 | - | 2e-59 | 44.40% (268) | hydrolase, alpha/beta fold family protein |
M. thermoresistible (build 8) | TH_2112 | - | 2e-53 | 38.75% (271) | hydrolase, alpha/beta fold family protein |
M. ulcerans Agy99 | MUL_0147 | bpoB | 3e-58 | 39.64% (280) | peroxidase BpoB |
M. vanbaalenii PYR-1 | Mvan_1862 | - | 1e-144 | 82.94% (293) | alpha/beta hydrolase fold |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4507|M.gilvum_PYR-GCK ------MTETLGAPEPFLTDGHGGIVIAADRRGE-----PTARAVVFLHG Mvan_1862|M.vanbaalenii_PYR-1 MRVSTYHPEMTSAPEQFLTDGHGGVRIVADRLGD-----PRARAVVFLHG MMAR_4960|M.marinum_M ---------MATAPERFSVQGPDGVRIVADRCGD-----PRGRAVVFLHG MAV_0677|M.avium_104 -----------MAAEPFTIRGPGGVQIVADRLGD-----PRARAVVFLHG Mb3502c|M.bovis_AF2122/97 --------------------------------------------MVFLHG Rv3473c|M.tuberculosis_H37Rv --------------------------------------------MVFLHG MSMEG_5209|M.smegmatis_MC2_155 --MSTAQT----ESQTVAFRGVDDLTLVGDEWNKGAERAADRPTVLLLHG MUL_0147|M.ulcerans_Agy99 --MSAMSN----NPRTVEFSGTEGITLVADEWNR-DTAASGRPTILMLHG TH_2112|M.thermoresistible__bu --LNSTHS----KPQTVRFRGAQGLTLVADQWNR-GSGPKDRPTILLLHG MAB_2045|M.abscessus_ATCC_1997 --MSAKRTGDSSAPVVERVPTADGLALAVDLYHC----DAPRAVVLLLHG MLBr_00862|M.leprae_Br4923 ----MPATQSIHKVPHQFVESPDGVRLAIYQSGQ-----PEGPAIVLVHG ::::** Mflv_4507|M.gilvum_PYR-GCK GGQTRRSWDRAAAAVAQRGWQSVTVDMRGHGESDW-SPDGDYRVASFAAD Mvan_1862|M.vanbaalenii_PYR-1 GGQTRRSWGRAAAAVAHRGWQAVTVDMRGHGESDW-SPDGDYRVSSFAAD MMAR_4960|M.marinum_M GGQTRRSWGRVAAVVAERGWQSVTVDLRGHGESDW-SPHGDYRVVSFAAD MAV_0677|M.avium_104 GGQTRRSWGKAAAAVAARGWQAVTVDLRGHGESDW-SGDGDYRVVSFAAD Mb3502c|M.bovis_AF2122/97 GGQTRRSWGRAAAAVAERGWQAVTIDLRGHGESDW-SSEGDYRLVSFAGD Rv3473c|M.tuberculosis_H37Rv GGQTRRSWGRAAAAVAERGWQAVTIDLRGHGESDW-SSEGDYRLVSFAGD MSMEG_5209|M.smegmatis_MC2_155 GGQNRYSWKNTGQILADQGFHVIALDARGHGDSDR-SPSANYSVDAMCGD MUL_0147|M.ulcerans_Agy99 GCQNRFSWKNTGQILADTGLHVIALDTRGHGDSDR-APDADYAIETLTSD TH_2112|M.thermoresistible__bu GGQNRFSWKNTGQILADKGWHVVALDSRGHGDSDR-SPTADYQLDDLCAD MAB_2045|M.abscessus_ATCC_1997 GGQSRHAWDVTAQRLHQRGYTVAAYDTRGHGDSDW-DPDGRYDMDRLGSD MLBr_00862|M.leprae_Br4923 FPDSHVLWDGVVPLLAKR-FRIVRYDNRGVGQSSVPKPVSAYTMTRFADD :.: * . : * ** *:*. . * : : * Mflv_4507|M.gilvum_PYR-GCK VREI-------------------------------LAQLPPRPVLVGASL Mvan_1862|M.vanbaalenii_PYR-1 VREI-------------------------------LDRLPPRPVLVGASL MMAR_4960|M.marinum_M IQEV-------------------------------LRGLPPQPVLVGASL MAV_0677|M.avium_104 VQAV-------------------------------LGTLPPKPVLVGASL Mb3502c|M.bovis_AF2122/97 IQEV-------------------------------LRNLPGQPALVGASL Rv3473c|M.tuberculosis_H37Rv IQEV-------------------------------LRNLPGQPALVGASL MSMEG_5209|M.smegmatis_MC2_155 VLAV-------------------------------LYQISRPVALIGASM MUL_0147|M.ulcerans_Agy99 IRHV-------------------------------LDAIGRPVVLIGASM TH_2112|M.thermoresistible__bu TLSV-------------------------------VDQIGRPVSLIGASM MAB_2045|M.abscessus_ATCC_1997 LLAVR-----------------------------SYADSGRPVAAIGASL MLBr_00862|M.leprae_Br4923 FAAVIDELSPDRPVHVLAHDWGSVGVWEYLSRSGASDRVASFTSVSGPSQ : *.* Mflv_4507|M.gilvum_PYR-GCK GGITAMLLAGELARGI---------------------------------- Mvan_1862|M.vanbaalenii_PYR-1 GGITSMLLAGELARGI---------------------------------- MMAR_4960|M.marinum_M GGFTSMLLAGELSPGI---------------------------------- MAV_0677|M.avium_104 GGFTSMLLAGELSPGI---------------------------------- Mb3502c|M.bovis_AF2122/97 GGFAAMLLAGELSPGI---------------------------------- Rv3473c|M.tuberculosis_H37Rv GGFAAMLLAGELSPGI---------------------------------- MSMEG_5209|M.smegmatis_MC2_155 GGLTGLLAAHEAGPER---------------------------------- MUL_0147|M.ulcerans_Agy99 GGLTGILVADSAGPDR---------------------------------- TH_2112|M.thermoresistible__bu GGLTGILVADRAGADK---------------------------------- MAB_2045|M.abscessus_ATCC_1997 GGLTILGTHLLAPPDL---------------------------------- MLBr_00862|M.leprae_Br4923 DQLVDYILSGLRRPWRPRTFARAVSQLFRLTYMVLFSIPVLVPMVLWIAL . :. Mflv_4507|M.gilvum_PYR-GCK -------------------ASAVVLVDIVPDMDPTGAERIHAFMADKMVD Mvan_1862|M.vanbaalenii_PYR-1 -------------------AAAVVLVDIVPDMDPSGAERIHAFMADRMVD MMAR_4960|M.marinum_M -------------------ASAVVLVDIVPNMDPSGASRIHAFMVERVES MAV_0677|M.avium_104 -------------------ASAVVLVDIVPNMDQSGANRIHAFMADRVDS Mb3502c|M.bovis_AF2122/97 -------------------ASAVVLVDIVPNMDLAGASRIHAFMAERVES Rv3473c|M.tuberculosis_H37Rv -------------------ASAVVLVDIVPNMDLAGASRIHAFMAERVES MSMEG_5209|M.smegmatis_MC2_155 -------------------VTQLVLVDVVPNFEKSGSARIRDFMASNVD- MUL_0147|M.ulcerans_Agy99 -------------------VTGLVLVDVVPKYEKDGSARIRDFMFTNLH- TH_2112|M.thermoresistible__bu -------------------VTELVLVDVVPRVEQAGTDRIRDFMMTNVA- MAB_2045|M.abscessus_ATCC_1997 -------------------WQAVVLVDVTPRMEMDGARRVVAFMSAHPE- MLBr_00862|M.leprae_Br4923 SSATIRRTMVDNISTDQIHHSATLARDAAHSVKTYPANYFRAFSGRRRGK : * . . : . * . Mflv_4507|M.gilvum_PYR-GCK GFASLDEVADMIAEYNPHRPKPTDLDGLRKNLRHK------GGRWYWHWD Mvan_1862|M.vanbaalenii_PYR-1 GFGSLDEVADMIAEFNPHRPRPADLDGLRNNLRRR------GERWYWHWD MMAR_4960|M.marinum_M GFGSLDEVADMIAAYNPHRPRPTDLEGLTTNLRRR------GDRWYWHWD MAV_0677|M.avium_104 GFASLDEVADAIAEYNPHRPRPTDLEGLTTNLRRR------GDRWYWHWD Mb3502c|M.bovis_AF2122/97 GFGSLDEVADVIANYNPHRPRPSDPDGLVANLRRR------GDRWYWHWD Rv3473c|M.tuberculosis_H37Rv GFGSLDEVADVIANYNPHRPRPSDPDGLVANLRRR------GDRWYWHWD MSMEG_5209|M.smegmatis_MC2_155 GFDTLEEAADAVAAYLPHRRRPRNPEGLKKNLRLR------DGRWYWHWD MUL_0147|M.ulcerans_Agy99 GFATLEEAADAVATYLPHRTKPRSPEGLKKNLRLR------DGRWYWHWD TH_2112|M.thermoresistible__bu GFETLEEAADAVAAYLPHRRRPRSPEGLKKNLRHR------DGRWHWHWD MAB_2045|M.abscessus_ATCC_1997 GFDSLESAADVIAAYNPHRPRPENLDGLRKVLARRE-----DGRWSWRWD MLBr_00862|M.leprae_Br4923 GVPVVNVPVQLIVNTMDRYVRPYGYDATARWVPRLWRRDIKAGHFSPMSH *. :: .: :. : :* . :. : :: . Mflv_4507|M.gilvum_PYR-GCK PRFIDG----------------------------TAPHPPMEVTDT---- Mvan_1862|M.vanbaalenii_PYR-1 PQFIDG----------------------------SAANPPIEVTDT---- MMAR_4960|M.marinum_M PRFISG----------------------------TAAFPPIEVTEP---- MAV_0677|M.avium_104 PQFISG----------------------------TAAFPPFEVTDP---- Mb3502c|M.bovis_AF2122/97 PQFIGG----------------------------IAAFPPVEVTDV---- Rv3473c|M.tuberculosis_H37Rv PQFIGG----------------------------IAAFPPVEVTDV---- MSMEG_5209|M.smegmatis_MC2_155 PAFLG----------------------------KPHDDPFVRVERL---- MUL_0147|M.ulcerans_Agy99 PAMMT----------------------------APGDDPELRTENF---- TH_2112|M.thermoresistible__bu PAFVT----------------------------RVG-EQFVDVDVL---- MAB_2045|M.abscessus_ATCC_1997 PAFVTSNFQ------------------------FLQGDPDEGAEYF---- MLBr_00862|M.leprae_Br4923 PQVMAAAVHDLADLVDGKQPSRALLRAQVGRSRDTFGDTLVSVTGAGSGI * .: . Mflv_4507|M.gilvum_PYR-GCK -------------DRLHA-AVGRIVDDGVPVLLVRG--------QVSDLV Mvan_1862|M.vanbaalenii_PYR-1 -------------ERLHS-AVEAILADGVPVLLVRG--------QVSDLV MMAR_4960|M.marinum_M -------------HRLYA-AVDTILRGGVPMLLIRG--------QMSDLV MAV_0677|M.avium_104 -------------DRMHA-AVEAILRDGVPILMIRG--------QMSDLV Mb3502c|M.bovis_AF2122/97 -------------DRMNA-AVATILRDEVPVLLVRG--------QVSDIV Rv3473c|M.tuberculosis_H37Rv -------------DRMNA-AVATILRDEVPVLLVRG--------QVSDIV MSMEG_5209|M.smegmatis_MC2_155 -------------EQA-------AVNLTVPILLIRG--------KLSDVV MUL_0147|M.ulcerans_Agy99 -------------ERA-------AMNLTIPILLIRG--------KLSDVV TH_2112|M.thermoresistible__bu -------------ERA-------ALRLTVPILLVRG--------KLSDVV MAB_2045|M.abscessus_ATCC_1997 -------------EMMSAFLLDGARQVSAPTLLVRG--------LLSDIV MLBr_00862|M.leprae_Br4923 GRETALALARRGAEVVVSDIDEAAAKNTAAQIVASGGVAYAYALDVSDAA . . :: * :** . Mflv_4507|M.gilvum_PYR-GCK SRDRAAAFLSRFPQIDFVDVDGAGHMVAGDRNDLFADAVLSFLTRREVAK Mvan_1862|M.vanbaalenii_PYR-1 SRERADAFVARFPQIAFVDVEGAGHMVAGDRNDLFADAVLDFLARSEIAR MMAR_4960|M.marinum_M SQERAEEFLARFPNVEFTDVRGAGHMVAGDRNDIFAAAVLDFLSRHLDAG MAV_0677|M.avium_104 SQERADEFLARFPQVEFTDVRGAGHMVAGDRNDVFADAVLDFLARHLDVE Mb3502c|M.bovis_AF2122/97 RQESADQFLSRFPQVEFTDVRGAGHMVAGDRNDAFAGAVLDFLARHVGVR Rv3473c|M.tuberculosis_H37Rv RQESADQFLSRFPQVEFTDVRGAGHMVAGDRNDAFAGAVLDFLARHVGVR MSMEG_5209|M.smegmatis_MC2_155 SPEGVAEFLEKVPAAEFVELSDAGHTAAGDDNDAFTQVVVEFVNR----- MUL_0147|M.ulcerans_Agy99 TSEGVQDFLDKVPHAEFVELSNAGHTAAGDDNDAFTEVVVDFVKRRAATG TH_2112|M.thermoresistible__bu SAEGVEEFLAKVPSAEFVELSAAXXXATIPARGSPRRCVTSPVCRRRPPT MAB_2045|M.abscessus_ATCC_1997 SEETVRHFLTVVPHAQTVDVSGAGHMIAGDNNDAFSTAVVEFLDRTI--- MLBr_00862|M.leprae_Br4923 AVEAFAEQVSAKHGVPDIVVNNAGIGQAGRFLDTPPEEFDRVLAVNLGGV : : : * : . . : Mflv_4507|M.gilvum_PYR-GCK P------------------------------------------------- Mvan_1862|M.vanbaalenii_PYR-1 P------------------------------------------------- MMAR_4960|M.marinum_M -------------------------------------------------- MAV_0677|M.avium_104 -------------------------------------------------- Mb3502c|M.bovis_AF2122/97 -------------------------------------------------- Rv3473c|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_5209|M.smegmatis_MC2_155 -------------------------------------------------- MUL_0147|M.ulcerans_Agy99 -------------------------------------------------- TH_2112|M.thermoresistible__bu SRPAPSPRSAPRHGNVAGPGANAVRR------------------------ MAB_2045|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 VNCCRAFGQRLVERGTGGHIVNVSSMAAYAPLQSLSAYCTSKAATYMFSD Mflv_4507|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1862|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_4960|M.marinum_M -------------------------------------------------- MAV_0677|M.avium_104 -------------------------------------------------- Mb3502c|M.bovis_AF2122/97 -------------------------------------------------- Rv3473c|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_5209|M.smegmatis_MC2_155 -------------------------------------------------- MUL_0147|M.ulcerans_Agy99 -------------------------------------------------- TH_2112|M.thermoresistible__bu -------------------------------------------------- MAB_2045|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 CLRAELDAVGVGLTTICPGVIDTNIIQSTRIDTPTAKQERVRDRRGQLDM Mflv_4507|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1862|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_4960|M.marinum_M -------------------------------------------------- MAV_0677|M.avium_104 -------------------------------------------------- Mb3502c|M.bovis_AF2122/97 -------------------------------------------------- Rv3473c|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_5209|M.smegmatis_MC2_155 -------------------------------------------------- MUL_0147|M.ulcerans_Agy99 -------------------------------------------------- TH_2112|M.thermoresistible__bu -------------------------------------------------- MAB_2045|M.abscessus_ATCC_1997 -------------------------------------------------- MLBr_00862|M.leprae_Br4923 MFRLRRYGPDKVADTILSAIKKNKPIRPVAPEAYALYGISRVLPQVLRST Mflv_4507|M.gilvum_PYR-GCK ------ Mvan_1862|M.vanbaalenii_PYR-1 ------ MMAR_4960|M.marinum_M ------ MAV_0677|M.avium_104 ------ Mb3502c|M.bovis_AF2122/97 ------ Rv3473c|M.tuberculosis_H37Rv ------ MSMEG_5209|M.smegmatis_MC2_155 ------ MUL_0147|M.ulcerans_Agy99 ------ TH_2112|M.thermoresistible__bu ------ MAB_2045|M.abscessus_ATCC_1997 ------ MLBr_00862|M.leprae_Br4923 ARIRVI