For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTSTFERVRTEDGTALAADIYRHETARAVVILLHGGGQNRHAWATTARRLHARGYTVVAYDARGHGDSEW DPDGRYDLDRLASDLLAVRRHVSDGRPPAVVGASLGGMTVLGTHLVAPADLWGAVVLVDITPRMEFHGAR RVVSFMAAHPDGFKTLDAAADIIAEYNRHRARPKNLDGLRKVLRQRDDGRWIWRWDPAFITSNLEFLRGD RAVGAEQFGAISELLTEGARRVQAPTLVVRGVHSDVTSQQSVEEFLEVVPHAEAADVSGAGHMVAGDDND AFTAAVAEFLDRTISNSAD
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_3026 | - | - | 100% (299) | alpha/beta hydrolase fold |
| M. gilvum PYR-GCK | Mflv_4622 | - | e-160 | 89.30% (299) | alpha/beta hydrolase fold |
| M. gilvum PYR-GCK | Mflv_2096 | - | 2e-61 | 43.30% (291) | alpha/beta hydrolase fold |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3502c | bpoA | 6e-54 | 43.98% (266) | peroxidase BpoA |
| M. tuberculosis H37Rv | Rv3473c | bpoA | 6e-54 | 43.98% (266) | peroxidase BpoA |
| M. leprae Br4923 | MLBr_02297 | - | 8e-10 | 25.89% (282) | putative hydrolase |
| M. abscessus ATCC 19977 | MAB_2045 | - | 1e-121 | 69.20% (289) | putative hydrolase (alpha/beta fold) |
| M. marinum M | MMAR_4837 | - | 1e-125 | 71.09% (294) | hydrolase |
| M. avium 104 | MAV_1846 | - | 3e-63 | 47.37% (285) | hydrolase, alpha/beta fold family protein |
| M. smegmatis MC2 155 | MSMEG_5209 | - | 4e-61 | 46.84% (269) | hydrolase, alpha/beta fold family protein |
| M. thermoresistible (build 8) | TH_2112 | - | 2e-52 | 44.57% (267) | hydrolase, alpha/beta fold family protein |
| M. ulcerans Agy99 | MUL_0147 | bpoB | 4e-57 | 42.31% (286) | peroxidase BpoB |
| M. vanbaalenii PYR-1 | Mvan_0315 | - | 1e-123 | 72.20% (295) | alpha/beta hydrolase fold |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3502c|M.bovis_AF2122/97 --------------------------------------------------
Rv3473c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_4837|M.marinum_M --MAATETPDSQRLTTSDHMTISQGRIRTSDGITLVADCYRH----AATR
Mvan_0315|M.vanbaalenii_PYR-1 ------------------MTSAVQHRVRTQDGITLAADCYDH----EDAR
Mflv_3026|M.gilvum_PYR-GCK -------------------MTSTFERVRTEDGTALAADIYRH----ETAR
MAB_2045|M.abscessus_ATCC_1997 ----------MSAKRTGDSSAPVVERVPTADGLALAVDLYHC----DAPR
MSMEG_5209|M.smegmatis_MC2_155 --------------MSTAQTESQTVAFRGVDDLTLVGDEWNKGAERAADR
MUL_0147|M.ulcerans_Agy99 --------------MSAMSNNPRTVEFSGTEGITLVADEWNR-DTAASGR
TH_2112|M.thermoresistible__bu --------------LNSTHSKPQTVRFRGAQGLTLVADQWNR-GSGPKDR
MAV_1846|M.avium_104 -------------MASPAASTPQAALTIPADDITMAADAFGD-----PAD
MLBr_02297|M.leprae_Br4923 MAMSNPSVTRIAGPWHHLDVHANGIRFHVVEAVPTQPAGQDCAP-SATAR
Mb3502c|M.bovis_AF2122/97 --MVFLHGGGQTRRSWGRAAAAVAERGWQAVTIDLRGHGESDWSSEGDYR
Rv3473c|M.tuberculosis_H37Rv --MVFLHGGGQTRRSWGRAAAAVAERGWQAVTIDLRGHGESDWSSEGDYR
MMAR_4837|M.marinum_M PVVLLLHGGGQNRHAWATTARRLHSHGYTVVAYDTRGHGDSDWDPSGQYD
Mvan_0315|M.vanbaalenii_PYR-1 PVVLLLHGGGQNRHAWSASARRLHACGYTVVAYDTRGHGDSDWDPAGRYD
Mflv_3026|M.gilvum_PYR-GCK AVVILLHGGGQNRHAWATTARRLHARGYTVVAYDARGHGDSEWDPDGRYD
MAB_2045|M.abscessus_ATCC_1997 AVVLLLHGGGQSRHAWDVTAQRLHQRGYTVAAYDTRGHGDSDWDPDGRYD
MSMEG_5209|M.smegmatis_MC2_155 PTVLLLHGGGQNRYSWKNTGQILADQGFHVIALDARGHGDSDRSPSANYS
MUL_0147|M.ulcerans_Agy99 PTILMLHGGCQNRFSWKNTGQILADTGLHVIALDTRGHGDSDRAPDADYA
TH_2112|M.thermoresistible__bu PTILLLHGGGQNRFSWKNTGQILADKGWHVVALDSRGHGDSDRSPTADYQ
MAV_1846|M.avium_104 PPVVLLHGGGQTRHSWKATAADLGGLGWYALTVDLRGHGDSGWSADGRYG
MLBr_02297|M.leprae_Br4923 PLVMLLHGFGSFWWSWRHQLRGLTEA--RLVAVDLRGYGGSDKPPRG-YD
:::*** . :* : : * **:* * . . *
Mb3502c|M.bovis_AF2122/97 LVSFAGDIQEVLRNLP--GQPALVGASLGGFAAMLLAGELSPGIASAVVL
Rv3473c|M.tuberculosis_H37Rv LVSFAGDIQEVLRNLP--GQPALVGASLGGFAAMLLAGELSPGIASAVVL
MMAR_4837|M.marinum_M VERFVSDLISVRDHVSPDSPPAVVGASLGGLIILATHLLAPPDLWAAVVL
Mvan_0315|M.vanbaalenii_PYR-1 LERLATDLLAVREHFSAATAPAVVGASLGGMTVLGTHLLTSGASWAAVVL
Mflv_3026|M.gilvum_PYR-GCK LDRLASDLLAVRRHVSDGRPPAVVGASLGGMTVLGTHLVAPADLWGAVVL
MAB_2045|M.abscessus_ATCC_1997 MDRLGSDLLAVRSYADSGRPVAAIGASLGGLTILGTHLLAPPDLWQAVVL
MSMEG_5209|M.smegmatis_MC2_155 VDAMCGDVLAVLYQIS--RPVALIGASMGGLTGLLAAHEAGPERVTQLVL
MUL_0147|M.ulcerans_Agy99 IETLTSDIRHVLDAIG--RPVVLIGASMGGLTGILVADSAGPDRVTGLVL
TH_2112|M.thermoresistible__bu LDDLCADTLSVVDQIG--RPVSLIGASMGGLTGILVADRAGADKVTELVL
MAV_1846|M.avium_104 LDRFASDVVRVTEFLA--RPPVLVGASLGG-NASLAALGSRPDLALGLVL
MLBr_02297|M.leprae_Br4923 GWTLAGDTAGLIRALG-HSSATLVGHAEGGLACWATALLHPR-------L
: * : :* : ** *
Mb3502c|M.bovis_AF2122/97 VDIVPNMDLAGASRIHAFMAERVESGFGSLDEVADVIANYNPHRPRPSD-
Rv3473c|M.tuberculosis_H37Rv VDIVPNMDLAGASRIHAFMAERVESGFGSLDEVADVIANYNPHRPRPSD-
MMAR_4837|M.marinum_M VDITPRMEFDGAHRIVSFMAAH-PDGFGTLDDAADVIAEYNPRRARPEN-
Mvan_0315|M.vanbaalenii_PYR-1 VDVTPRLEFQGARRVVTFMAAH-PDGFGTLTDAAEVIAAYNPHRSRPAN-
Mflv_3026|M.gilvum_PYR-GCK VDITPRMEFHGARRVVSFMAAH-PDGFKTLDAAADIIAEYNRHRARPKN-
MAB_2045|M.abscessus_ATCC_1997 VDVTPRMEMDGARRVVAFMSAH-PEGFDSLESAADVIAAYNPHRPRPEN-
MSMEG_5209|M.smegmatis_MC2_155 VDVVPNFEKSGSARIRDFMASN-VDGFDTLEEAADAVAAYLPHRRRPRN-
MUL_0147|M.ulcerans_Agy99 VDVVPKYEKDGSARIRDFMFTN-LHGFATLEEAADAVATYLPHRTKPRS-
TH_2112|M.thermoresistible__bu VDVVPRVEQAGTDRIRDFMMTN-VAGFETLEEAADAVAAYLPHRRRPRS-
MAV_1846|M.avium_104 VDVSPFLQPSGTNRIRDFMVSHAEEGFGTLEEVADAVAAYLPHRPRPRN-
MLBr_02297|M.leprae_Br4923 VRAIALINSPHPAALRRSMLTHRNQGYALLPTLLRYQLPIWPERLLTRNN
* . : . : * . *: * .* . .
Mb3502c|M.bovis_AF2122/97 PDGLVANLRRR-GDRWYWHWDPQFIGGIAAFPP-------------VEVT
Rv3473c|M.tuberculosis_H37Rv PDGLVANLRRR-GDRWYWHWDPQFIGGIAAFPP-------------VEVT
MMAR_4837|M.marinum_M LDGLHKVLRQRSDGRWIWRWDPAFISSNFDVLQG------------NLMT
Mvan_0315|M.vanbaalenii_PYR-1 VDGLRKVLRQRHDGRWIWRWDPAFIHSNFDFLRD------------ESTT
Mflv_3026|M.gilvum_PYR-GCK LDGLRKVLRQRDDGRWIWRWDPAFITSNLEFLRG------------DRAV
MAB_2045|M.abscessus_ATCC_1997 LDGLRKVLARREDGRWSWRWDPAFVTSNFQFLQG------------DPDE
MSMEG_5209|M.smegmatis_MC2_155 PEGLKKNLRLR-DGRWYWHWDPAFLGKPHD----------------DPFV
MUL_0147|M.ulcerans_Agy99 PEGLKKNLRLR-DGRWYWHWDPAMMTAPGD----------------DPEL
TH_2112|M.thermoresistible__bu PEGLKKNLRHR-DGRWHWHWDPAFVTRVG-----------------EQFV
MAV_1846|M.avium_104 LDGLRKNLRLR-DGRWYWHWDPAFMASPTDLPVQR-----------DQLV
MLBr_02297|M.leprae_Br4923 AAEIERLVRSRSSAKWQACEDFAVTIDHLRIAIQIPAAAHCALEYQRWAV
: : * . :* * .
Mb3502c|M.bovis_AF2122/97 DVDRMNAAVAT----ILRDEVPVLLVRGQVSDIVRQESADQFLSRFPQVE
Rv3473c|M.tuberculosis_H37Rv DVDRMNAAVAT----ILRDEVPVLLVRGQVSDIVRQESADQFLSRFPQVE
MMAR_4837|M.marinum_M GSEEFDAISGFLADAARRITAPTLLVRGALSDVVSQDTVNEFLQLVPHAE
Mvan_0315|M.vanbaalenii_PYR-1 GTEQFDAISHLLIDGARRVSAPTLLVRGLLSDVVSQATVDEFQQLVPHAE
Mflv_3026|M.gilvum_PYR-GCK GAEQFGAISELLTEGARRVQAPTLVVRGVHSDVTSQQSVEEFLEVVPHAE
MAB_2045|M.abscessus_ATCC_1997 GAEYFEMMSAFLLDGARQVSAPTLLVRGLLSDIVSEETVRHFLTVVPHAQ
MSMEG_5209|M.smegmatis_MC2_155 RVERLEQA-------AVNLTVPILLIRGKLSDVVSPEGVAEFLEKVPAAE
MUL_0147|M.ulcerans_Agy99 RTENFERA-------AMNLTIPILLIRGKLSDVVTSEGVQDFLDKVPHAE
TH_2112|M.thermoresistible__bu DVDVLERA-------ALRLTVPILLVRGKLSDVVSAEGVEEFLAKVPSAE
MAV_1846|M.avium_104 DPARLGAA-------ASSLRLPTLLVRGGESDVLSVDDAVRFLELVPHAE
MLBr_02297|M.leprae_Br4923 RSQLRNEGRKFMKSMSRPFSVPLLHVRGDADPYLLADSVDRTRRYAPHGR
* * :** . . * .
Mb3502c|M.bovis_AF2122/97 FTDVRGAGHMVAGDRNDAFAGAVLDFLARHVGVR----------------
Rv3473c|M.tuberculosis_H37Rv FTDVRGAGHMVAGDRNDAFAGAVLDFLARHVGVR----------------
MMAR_4837|M.marinum_M TTDVTGTGHMVAGDNNDAFTAAVTDFLDRTMGMT----------------
Mvan_0315|M.vanbaalenii_PYR-1 TVDVSGTGHMIAGDDNDAFSSAVTEFLGRSILQPPP--------------
Mflv_3026|M.gilvum_PYR-GCK AADVSGAGHMVAGDDNDAFTAAVAEFLDRTISNSAD--------------
MAB_2045|M.abscessus_ATCC_1997 TVDVSGAGHMIAGDNNDAFSTAVVEFLDRTI-------------------
MSMEG_5209|M.smegmatis_MC2_155 FVELSDAGHTAAGDDNDAFTQVVVEFVNR---------------------
MUL_0147|M.ulcerans_Agy99 FVELSNAGHTAAGDDNDAFTEVVVDFVKRRAATG----------------
TH_2112|M.thermoresistible__bu FVELSAAXXXATIPARGSPRRCVTSPVCRRRPPTSRPAPSPRSAPRHGNV
MAV_1846|M.avium_104 FASVAGAHHMVAGDDNAVFEDVLGDFLARRVRSRLNLLNHR---------
MLBr_02297|M.leprae_Br4923 YVSVSDAGHFSHEEAPEEINRYLTRFLKQVHGPRLS--------------
..: : : : :
Mb3502c|M.bovis_AF2122/97 ----------
Rv3473c|M.tuberculosis_H37Rv ----------
MMAR_4837|M.marinum_M ----------
Mvan_0315|M.vanbaalenii_PYR-1 ----------
Mflv_3026|M.gilvum_PYR-GCK ----------
MAB_2045|M.abscessus_ATCC_1997 ----------
MSMEG_5209|M.smegmatis_MC2_155 ----------
MUL_0147|M.ulcerans_Agy99 ----------
TH_2112|M.thermoresistible__bu AGPGANAVRR
MAV_1846|M.avium_104 ----------
MLBr_02297|M.leprae_Br4923 ----------