For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKAVTWHGRRDVRVDTVADPKIEQPTDAIIEVTSTNICGSDLHLYEVLGAFMSEGDVLGHEPMGIVREVG AEVSNLSVGDRVVIPFQISCGHCFMCDMKLYTQCETTQVREQGMGAALFGFSELYGSVPGGQAEYLRVPQ AQFTHIKVPEGPDDSRFVYLSDVLPTAWQSVAYADIPDGGTVTVIGLGPIGDMAARIAQHKGHTVFAVDF VPERLARAKARGIHTIDASALDGSVGDEVRRLTSGRGSDSVIDAVGMEAHGSPVAKAVQDATAFLPGAIA KPMMKKAGVDRLDALYTAIDCVRRGGTLSVIGVYGGMADPMPILTMFDKQIQVRMGQANVKRWVDDILPL LTDEDPLGVDTFATHTLPLDQAPHAYEIFQKKQDGAVKVILKP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1966 | - | - | 100% (393) | alcohol dehydrogenase |
M. gilvum PYR-GCK | Mflv_3148 | - | 1e-58 | 36.90% (393) | alcohol dehydrogenase |
M. gilvum PYR-GCK | Mflv_4517 | - | 1e-47 | 34.43% (395) | alcohol dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1929 | - | 5e-33 | 36.06% (269) | dehydrogenase |
M. tuberculosis H37Rv | Rv1895 | - | 5e-51 | 35.28% (394) | dehydrogenase |
M. leprae Br4923 | MLBr_01784 | adhE2 | 5e-16 | 31.06% (235) | putative alcohol dehydrogenase (Zn dependent) |
M. abscessus ATCC 19977 | MAB_2084 | - | 9e-15 | 29.68% (283) | zinc-type alcohol dehydrogenase AdhD |
M. marinum M | MMAR_2790 | - | 2e-50 | 35.28% (394) | dehydrogenase |
M. avium 104 | MAV_4101 | - | 0.0 | 79.39% (393) | S-(hydroxymethyl)glutathione dehydrogenase |
M. smegmatis MC2 155 | MSMEG_6616 | - | 0.0 | 82.70% (393) | S-(hydroxymethyl)glutathione dehydrogenase |
M. thermoresistible (build 8) | TH_2319 | - | 9e-88 | 66.53% (239) | S-(hydroxymethyl)glutathione dehydrogenase |
M. ulcerans Agy99 | MUL_2962 | - | 1e-50 | 35.28% (394) | dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_4749 | - | 0.0 | 88.04% (393) | alcohol dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mb1929|M.bovis_AF2122/97 -------------------------------------------------- Rv1895|M.tuberculosis_H37Rv ----MRAVVIDGAGSVRVNTQPDPALPGPDGVVVAVTAAGICGSDLHFYE MMAR_2790|M.marinum_M ----MRTVVIDGPGSIRVDNRPDPALPGSDGVIVAVSAAGICGSDLHFYE MUL_2962|M.ulcerans_Agy99 ----MRTVVIDGPGSIRVDNRPDPALPGSDGVIVVVSAAGICGSDLHFYE Mflv_1966|M.gilvum_PYR-GCK ----MKAVTWHGRRDVRVDTVADPKIEQPTDAIIEVTSTNICGSDLHLYE Mvan_4749|M.vanbaalenii_PYR-1 ----MRAVTWHGRRDVRVDSVPDPKIEEPTDAIIEVTSTNICGSDLHLYE MSMEG_6616|M.smegmatis_MC2_155 ----MKAVTWHGRRDVRVDNVPDPKIEQPTDAIIEVTSTNICGSDLHLYE MAV_4101|M.avium_104 ----MKAVTWHGKRDVRVDSVPDPKIEQPTDAIIEVTSTNICGSDLHLYE TH_2319|M.thermoresistible__bu -------VTWHGRRKVSVDTVPDPAIMEPTDAIIRVTSTNICGSDLHLYE MLBr_01784|M.leprae_Br4923 MSQTVRGVISRKKDEPVELVDIVIPDPGPGEAVVDVTACGVCHTDLTYRE MAB_2084|M.abscessus_ATCC_1997 --MKTRAAVLWGLEQKWEVEEVDLDPPGPGEVLVRLAATGLCHSDEHLVT Mb1929|M.bovis_AF2122/97 -------------------------------------------------- Rv1895|M.tuberculosis_H37Rv GEYPFTEP-VALGHEAVGTIVEAGPQVRTVGVGDLVMVSSVAGCGVCPGC MMAR_2790|M.marinum_M GEYPLAEP-VALGHEAVGTVVEKGPDVHTVEVGDQVMVSSVAGCGACAGC MUL_2962|M.ulcerans_Agy99 GEYPLAEP-VALGHEAVGTVVEKGPDVHTVEVGDQVMVSSVAGCGACAGC Mflv_1966|M.gilvum_PYR-GCK VLGAFMSEGDVLGHEPMGIVREVGAEVSNLSVGDRVVIPFQISCGHCFMC Mvan_4749|M.vanbaalenii_PYR-1 VLGAFMNEGDILGHEPMGVVREVGSAVSNLAVGDRVVIPFQISCGHCFMC MSMEG_6616|M.smegmatis_MC2_155 VLGAFMNEGDILGHEPMGIVREVGSAVDGLSVGDRVVIPFQISCGHCFMC MAV_4101|M.avium_104 ILGAFMKPGDILGHEPMGVVREVGTETGDLRVGDRVVIPFQICCGSCYMC TH_2319|M.thermoresistible__bu VLSAFMSPGDILGHEAMGVVEEVGPEVGALQAGDRVVIPFNISCGTCWMC MLBr_01784|M.leprae_Br4923 GGINDRYP-FLLGHEAAGTVEVVGPGVTAVEPGDFVILNWRAVCGQCRAC MAB_2084|M.abscessus_ATCC_1997 GDLPIPLP-VVGGHEGAGTVVECGEGVEDLSEGDSVILTFLPSCGRCSYC Mb1929|M.bovis_AF2122/97 --------------------MIFG----AGVLGG-----AQADLLAVPAA Rv1895|M.tuberculosis_H37Rv ETHDPVMCFS--------GPMIFG----AGVLGG-----AQADLLAVPAA MMAR_2790|M.marinum_M ATRDPAMCVS--------GPQIFG----SGALGG-----AQADLLAVPAA MUL_2962|M.ulcerans_Agy99 ATRDPAMCVS--------GPQIFG----SGALGG-----AQADLLAVPAT Mflv_1966|M.gilvum_PYR-GCK DMKLYTQCETTQVREQGMGAALFGFSELYGSVPG-----GQAEYLRVPQA Mvan_4749|M.vanbaalenii_PYR-1 DRKLYTQCETTQVRDQGMGAALFGYSELYGSVPG-----GQAEYLRVPQA MSMEG_6616|M.smegmatis_MC2_155 DQKLYTQCETTQVREQGMGAALFGYSELYGSVPG-----GQAQYLRVPQA MAV_4101|M.avium_104 GQQLYTQCETTQVRDQGMGAALFGYSELYGEVPG-----GQAELLRVPQA TH_2319|M.thermoresistible__bu AQGLQSQCETTQNRDQGTGAALFGYSKLYGEVAG-----GQAEYLRVPQA MLBr_01784|M.leprae_Br4923 KRGRPSYCFDTFN--AQQKMTLIDGTELTPALGI-----GAFADKTLVHS MAB_2084|M.abscessus_ATCC_1997 ARGMGNLCELGAALMMGPQIDGTYRFHARGEDVGQMCLLGTFSEYTVVPQ . : Mb1929|M.bovis_AF2122/97 DFQVLKIPEGITTEQALLLTDNLATGWAAAQRADISFGSAVAVIGLGAVG Rv1895|M.tuberculosis_H37Rv DFQVLKIPEGITTEQALLLTDNLATGWAAAQRADISFGSAVAVIGLGAVG MMAR_2790|M.marinum_M DFQVLKIPAAITTEQALLLTDNLATGWAAARRADILFGATVAVIGLGAVG MUL_2962|M.ulcerans_Agy99 DFQVLKIPAAITTEQALLLTDNLATGWAAARRADIPFGATVAVIGLGAVG Mflv_1966|M.gilvum_PYR-GCK QFTHIKVPEGPDDSRFVYLSDVLPTAWQSVAYADIPDGGTVTVIGLGPIG Mvan_4749|M.vanbaalenii_PYR-1 QFTHIKVPDGPPDSRFVYLSDVLPTAWQAVAYADVPDGGTVTVLGLGPIG MSMEG_6616|M.smegmatis_MC2_155 QFTHIKVPDGPPDSRYVYLSDVLPTAWQSVAYAEIPKGGTVTVLGLGPIG MAV_4101|M.avium_104 QFTHIKVPVGPPDSRFVYLSDVLPTAWQAVAYADIPDGGTVAVLGLGPIG TH_2319|M.thermoresistible__bu QYTHITVPHDGPDDRYVYLSDVLPTAWQGVEYAAVPDGGTLVVLGLGPIG MLBr_01784|M.leprae_Br4923 GQCTKVDPAADPAVAGLLGCGVMAGLGAAINTAAVSRDDTVAVIGCGGVG MAB_2084|M.abscessus_ATCC_1997 ASVVKIDGGIPLDRAALIGCGVTTGYGSAVRTGEVRAGDTVVVVGAGGIG : . . . . : . ::.*:* * :* Mb1929|M.bovis_AF2122/97 LCALRSAFIHGAATVFAVDRVKGRLQ--RAATWGATPIPS-----PAAET Rv1895|M.tuberculosis_H37Rv LCALRSAFIHGAATVFAVDRVKGRLQ--RAATWGATPIPS-----PAAET MMAR_2790|M.marinum_M LCAVRSALAQGAATVFAVDRVQGRLQ--RASEWGATAVAS-----PAAEA MUL_2962|M.ulcerans_Agy99 LCAVRSALAQGAATVFAVDRVQGRLQ--RAAEWGATAVAS-----PAAEA Mflv_1966|M.gilvum_PYR-GCK DMAARIAQHKG-HTVFAVDFVPERLA--RAKARGIHTIDASALDGSVGDE Mvan_4749|M.vanbaalenii_PYR-1 DMAARIAQHLG-YQVFAVDLVPERLD--RAIARGIHTIDASIVDGSVGDE MSMEG_6616|M.smegmatis_MC2_155 DMAARIAHHLG-YEVFAVDRIPERLR--RAADRGIQAIDLGAIDEPLGDV MAV_4101|M.avium_104 DMASRIADHLG-YRVIAVDLVPERLG--RAAQRGIHTIDLARLDAGLGDA TH_2319|M.thermoresistible__bu SMACRIAAHRGNCRVIGVDRVPERIEKVRPYCADVLNVDTDDVEAAVREQ MLBr_01784|M.leprae_Br4923 DAAISGAALVGANRIIAVDIDDTKLE--WARTFGATHTVN-ALELEVVKT MAB_2084|M.abscessus_ATCC_1997 MNAIQGARIAGALAIVAVDPVNFKRE--QASGFGATHTAAS--MDEAWSL * * * :..** : . . . Mb1929|M.bovis_AF2122/97 ILAATRGRGADSVIDAVGTDASMS-------------------------- Rv1895|M.tuberculosis_H37Rv ILAATRGRGADSVIDAVGTDASMS-------------------------- MMAR_2790|M.marinum_M IVAATGGRGADSVIDAVGTDASMT-------------------------- MUL_2962|M.ulcerans_Agy99 IVAATSGRGADSVIDAVDTDASMT-------------------------- Mflv_1966|M.gilvum_PYR-GCK VRRLTSGRGSDSVIDAVGMEAHGSPVAKAVQDATAFLPGAIAKP------ Mvan_4749|M.vanbaalenii_PYR-1 VRRLTGGRGSDSVIDAVGMEAHGSPVAKFAQQATALLPDAVAKP------ MSMEG_6616|M.smegmatis_MC2_155 IRSMTHGRGTDAVIDAVGMEAHGSPVAKIMQTAAAALPDAVAKP------ MAV_4101|M.avium_104 IRDLTDGRGADSVIDAVGMEAHGSPAAKLAQQVAGVLPDALGKR------ TH_2319|M.thermoresistible__bu TGGXXVQTPPDPRRQSADCENHADQHGRPEHPPEELHHQADDQRQRRHER MLBr_01784|M.leprae_Br4923 IQDLTSGFGVDVVIDTVGRPETWK-------------------------- MAB_2084|M.abscessus_ATCC_1997 VSDMTRGKLADVCILTTDVAEGSYT------------------------- * :.. Mb1929|M.bovis_AF2122/97 --------------DALNAVRPGGTVSVVGVHD--LQPFPLPALTCLLRS Rv1895|M.tuberculosis_H37Rv --------------DALNAVRPGGTVSVVGVHD--LQPFPVPALTCLLRS MMAR_2790|M.marinum_M --------------DALNAVRAGGTVSVVGVHD--LQPFPLPALTCLLRS MUL_2962|M.ulcerans_Agy99 --------------DALNAVRAGGTVSVVGVHD--LQPFPLPALTCLLRS Mflv_1966|M.gilvum_PYR-GCK MMKKAGVDRLDALYTAIDCVRRGGTLSVIGVYG--GMADPMPILTMFDKQ Mvan_4749|M.vanbaalenii_PYR-1 MMQKAGVDRLDALYTAIDCVRRGGTLSLIGVYG--GMADPMPMLTLFDKQ MSMEG_6616|M.smegmatis_MC2_155 MMENAGVDRLDALYSAIDTVRRGGTISLIGVYG--GTADPIPMLTLFDKQ MAV_4101|M.avium_104 LMQTAGVDRLSALYSAIDAVRRGGTISLIGVYG--GMADPLPMLTLFDKQ TH_2319|M.thermoresistible__bu DAATAGSPPLPSPWPDRTTTHR-HTWRRLGGME--LLRDVVVLLHIVGFA MLBr_01784|M.leprae_Br4923 --------------QAFYARDLAGTVVLVGVPTP-DMRLDMPLLDFFSHG MAB_2084|M.abscessus_ATCC_1997 -------------AEALALVGKRGRVVVTAIGHPDESSISGSLLEMTLYE . * Mb1929|M.bovis_AF2122/97 ITL---RMTMAPVQRTWPE-------LIPLLQ----------SGRLDVDG Rv1895|M.tuberculosis_H37Rv ITL---RMTMAPVQRTWPE-------LIPLLQ----------SGRLDVDG MMAR_2790|M.marinum_M ITL---RLTIAPVQRTWSE-------LIPLLE----------SGRLDVDG MUL_2962|M.ulcerans_Agy99 ITL---RLTIAPVQRTWSE-------LIPLLE----------SGRLDVDG Mflv_1966|M.gilvum_PYR-GCK IQV---RMGQANVKRWVDD-------ILPLLT---------DEDPLGVDT Mvan_4749|M.vanbaalenii_PYR-1 IQV---RMGQANVKKWVDD-------IMPLLT---------DSDPLGVDT MSMEG_6616|M.smegmatis_MC2_155 IQL---RMGQANVKRWVDD-------IMPLLG---------DDDPLGVDD MAV_4101|M.avium_104 VTL---RMGQANVKRWVDD-------IMPLLT---------DDDPLGVDD TH_2319|M.thermoresistible__bu VTFGA-WTAEAVARRFRTTRLMDYGLLLSLITGLALAAPWPAGIVLNYPK MLBr_01784|M.leprae_Br4923 GSLKSSWYGDCLPERDFPT-------LVDLYL----------QGRLPLGK MAB_2084|M.abscessus_ATCC_1997 KQIRGALYGSSNAPHDIPR-------LVELYS----------AGLLKLDE . . : :: * * Mb1929|M.bovis_AF2122/97 IFTTTLPLDEAAKGYATARARSGEELKVLLTP------------------ Rv1895|M.tuberculosis_H37Rv IFTTTLPLDEAAKGYATARARSGEELRFCLRPDSRDVLGAHETVDLYVHV MMAR_2790|M.marinum_M IFTTSLPLDEAAKGYSIAGSRSGNDVKVLLKV------------------ MUL_2962|M.ulcerans_Agy99 IFTTSLPLDEAAKGYSIAGSRSGNDVKVLLKV------------------ Mflv_1966|M.gilvum_PYR-GCK FATHTLPLDQAPHAYEIFQKKQDGAVKVILKP------------------ Mvan_4749|M.vanbaalenii_PYR-1 FATHVLPMEEAPHAYKIFQQKQDGAVKVILQP------------------ MSMEG_6616|M.smegmatis_MC2_155 FATHILPIDEAPHAYEIFQKKQDGAVKIILKP------------------ MAV_4101|M.avium_104 FATHVLPLERAPHAYEIFQKKQDGAVKVILKP------------------ TH_2319|M.thermoresistible__bu IGLKLVLLVALGAVLGIGGAHQRRTGNPVPRPLFVTAGVLSFAAAAVAVL MLBr_01784|M.leprae_Br4923 FVSERIGLGDVEEAFHKIHGGKVLRSVVML-------------------- MAB_2084|M.abscessus_ATCC_1997 LVTREYSLDQINEGYQDMRSGRNIRGLVRF-------------------- : : Mb1929|M.bovis_AF2122/97 ------------------------- Rv1895|M.tuberculosis_H37Rv RRCQSVADLQLEGAADGVDGPSMLN MMAR_2790|M.marinum_M ------------------------- MUL_2962|M.ulcerans_Agy99 ------------------------- Mflv_1966|M.gilvum_PYR-GCK ------------------------- Mvan_4749|M.vanbaalenii_PYR-1 ------------------------- MSMEG_6616|M.smegmatis_MC2_155 ------------------------- MAV_4101|M.avium_104 ------------------------- TH_2319|M.thermoresistible__bu W------------------------ MLBr_01784|M.leprae_Br4923 ------------------------- MAB_2084|M.abscessus_ATCC_1997 -------------------------