For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRTVVVDSQRSIRVDTRPDPRLPGPDGVIVDVTASAICGSDLHFLDGHYPIDQPVPIGHEAVGVVVETGS DVTRFTNGDRVLVSSVTGCGRCAGCLTLDPVKCVHGPQIFGTGLLGGAQSDLLAVPAADFQLLAVPDGIG TEEALLLTDNLPTGWAAAKRADIPVGGTVAVIGAGAVGQCALRSALALGAARVFAVDPVVARRERAAAAG ATPMDSPAAQTILEATDGLGADSVIDAVGTDASIDDALAGVRTGGTVSVVGVHDLTPYPLPALVCLLRSL TLRMTTAPVQQTWAELVPLLQAGRLSVDGIFTDAMPLAEAEAAYAAAFSRSGEHLKVHLVP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4517 | - | - | 100% (341) | alcohol dehydrogenase |
M. gilvum PYR-GCK | Mflv_1966 | - | 9e-48 | 34.43% (395) | alcohol dehydrogenase |
M. gilvum PYR-GCK | Mflv_3148 | - | 2e-42 | 34.31% (376) | alcohol dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1929 | - | 9e-91 | 73.39% (233) | dehydrogenase |
M. tuberculosis H37Rv | Rv1895 | - | 1e-131 | 68.62% (341) | dehydrogenase |
M. leprae Br4923 | MLBr_01784 | adhE2 | 1e-25 | 30.61% (330) | putative alcohol dehydrogenase (Zn dependent) |
M. abscessus ATCC 19977 | MAB_0983c | - | 7e-32 | 33.04% (336) | zinc-containing alcohol dehydrogenase |
M. marinum M | MMAR_2790 | - | 1e-130 | 69.32% (339) | dehydrogenase |
M. avium 104 | MAV_2804 | - | 1e-132 | 69.21% (341) | zinc-binding dehydrogenase |
M. smegmatis MC2 155 | MSMEG_6616 | - | 2e-47 | 33.92% (395) | S-(hydroxymethyl)glutathione dehydrogenase |
M. thermoresistible (build 8) | TH_2319 | - | 8e-29 | 36.67% (210) | S-(hydroxymethyl)glutathione dehydrogenase |
M. ulcerans Agy99 | MUL_2962 | - | 1e-131 | 69.32% (339) | dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_1841 | - | 1e-162 | 82.99% (341) | alcohol dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment MLBr_01784|M.leprae_Br4923 ------MSQTVRGVISRKKDEPVELVDIVIPDPGPGEAVVDVTACGVCHT MAB_0983c|M.abscessus_ATCC_199 MRIRSAVLHAAPIERPYRDTHPLKVIELELDPPGPGEVLVRIEAAGLCHS Mflv_4517|M.gilvum_PYR-GCK ----------MRTVVVDSQRSIRVDTRPDPRLPGPDGVIVDVTASAICGS Mvan_1841|M.vanbaalenii_PYR-1 ----------MRAVVIDSERRIRVETRPDPQLPGPDGAIVEVTATAICGS Mb1929|M.bovis_AF2122/97 -------------------------------------------------- Rv1895|M.tuberculosis_H37Rv ----------MRAVVIDGAGSVRVNTQPDPALPGPDGVVVAVTAAGICGS MMAR_2790|M.marinum_M ----------MRTVVIDGPGSIRVDNRPDPALPGSDGVIVAVSAAGICGS MUL_2962|M.ulcerans_Agy99 ----------MRTVVIDGPGSIRVDNRPDPALPGSDGVIVVVSAAGICGS MAV_2804|M.avium_104 ----------MRTVVVDGPRSIRVDTRPDPVLPGPDGAIVEVSAAGICGS MSMEG_6616|M.smegmatis_MC2_155 ----------MKAVTWHGRRDVRVDNVPDPKIEQPTDAIIEVTSTNICGS TH_2319|M.thermoresistible__bu -------------VTWHGRRKVSVDTVPDPAIMEPTDAIIRVTSTNICGS MLBr_01784|M.leprae_Br4923 DLTYREGGINDRYP-FLLGHEAAGTVEVVGPGVTAVEPGDFVILNWRAVC MAB_0983c|M.abscessus_ATCC_199 DLSVVDGNRIRPVP-MALGHEAAGVIAAVGPGVRDVSPGDHVVLVYVPSC Mflv_4517|M.gilvum_PYR-GCK DLHFLDGHYPIDQP-VPIGHEAVGVVVETGSDVTRFTNGDRVLVSSVTGC Mvan_1841|M.vanbaalenii_PYR-1 DLHFLEGHYPIDQP-VSIGHEAVGVVVETGTTVAGFKVGDRVLVSSVAGC Mb1929|M.bovis_AF2122/97 -------------------------------------------------- Rv1895|M.tuberculosis_H37Rv DLHFYEGEYPFTEP-VALGHEAVGTIVEAGPQVRTVGVGDLVMVSSVAGC MMAR_2790|M.marinum_M DLHFYEGEYPLAEP-VALGHEAVGTVVEKGPDVHTVEVGDQVMVSSVAGC MUL_2962|M.ulcerans_Agy99 DLHFYEGEYPLAEP-VALGHEAVGTVVEKGPDVHTVEVGDQVMVSSVAGC MAV_2804|M.avium_104 DLHFYEADFPMPDP-IALGHEAIGTVVEAGPQVRNVKVGDQVMVSSVAGC MSMEG_6616|M.smegmatis_MC2_155 DLHLYEVLGAFMNEGDILGHEPMGIVREVGSAVDGLSVGDRVVIPFQISC TH_2319|M.thermoresistible__bu DLHLYEVLSAFMSPGDILGHEAMGVVEEVGPEVGALQAGDRVVIPFNISC MLBr_01784|M.leprae_Br4923 GQCRACKRGRPSYCFDTF-NAQQKMTLIDG---------TELTPALGIGA MAB_0983c|M.abscessus_ATCC_199 GACRYCSSGRPALCPDAA-AANGRGDLIRGGTRLHDLDGTEVRHHLGVSG Mflv_4517|M.gilvum_PYR-GCK GRCAGCLTLDPVKCVHGP-QIFGTG--LLG----------------GAQS Mvan_1841|M.vanbaalenii_PYR-1 GRCAGCRTQDPVKCVQGP-QIFGSG--LLG----------------GAQA Mb1929|M.bovis_AF2122/97 -------------------MIFGAG--VLG----------------GAQA Rv1895|M.tuberculosis_H37Rv GVCPGCETHDPVMCFSGP-MIFGAG--VLG----------------GAQA MMAR_2790|M.marinum_M GACAGCATRDPAMCVSGP-QIFGSG--ALG----------------GAQA MUL_2962|M.ulcerans_Agy99 GACAGCATRDPAMCVSGP-QIFGSG--ALG----------------GAQA MAV_2804|M.avium_104 GSCAGCATRDPVLCHSGF-QIFGGG--VLG----------------GAQA MSMEG_6616|M.smegmatis_MC2_155 GHCFMCDQKLYTQCETTQVREQGMGAALFG-------YSELYGSVPGGQA TH_2319|M.thermoresistible__bu GTCWMCAQGLQSQCETTQNRDQGTGAALFG-------YSKLYGEVAGGQA * * . MLBr_01784|M.leprae_Br4923 FADKTLVHSGQCTKVDPAADPAVAGLLGCGVMAGLGAAINTAAVSRDDTV MAB_0983c|M.abscessus_ATCC_199 FADHAVVDRNSVVVIDENVPLDTAALFGCAMLTGFGAVTHTASVRPGDSV Mflv_4517|M.gilvum_PYR-GCK DLLAVPAADFQLLAVPDGIGTEEALLLTDNLPTGWAAAKR-ADIPVGGTV Mvan_1841|M.vanbaalenii_PYR-1 DLMAVPAADFQLLAIPDGIDTEQALLLTDNLATGWAAAKR-ADIPVGGTV Mb1929|M.bovis_AF2122/97 DLLAVPAADFQVLKIPEGITTEQALLLTDNLATGWAAAQR-ADISFGSAV Rv1895|M.tuberculosis_H37Rv DLLAVPAADFQVLKIPEGITTEQALLLTDNLATGWAAAQR-ADISFGSAV MMAR_2790|M.marinum_M DLLAVPAADFQVLKIPAAITTEQALLLTDNLATGWAAARR-ADILFGATV MUL_2962|M.ulcerans_Agy99 DLLAVPATDFQVLKIPAAITTEQALLLTDNLATGWAAARR-ADIPFGATV MAV_2804|M.avium_104 DLLAVPAADFQLLKIPEGISTEQALLLTDNLATGWAAAQR-ADIPFGGTV MSMEG_6616|M.smegmatis_MC2_155 QYLRVPQAQFTHIKVPDGPPDSRYVYLSDVLPTAWQSVAY-AEIPKGGTV TH_2319|M.thermoresistible__bu EYLRVPQAQYTHITVPHDGPDDRYVYLSDVLPTAWQGVEY-AAVPDGGTL . : : : :. .. * : . :: MLBr_01784|M.leprae_Br4923 AVIGCGGVGDAAISGAALVGANRIIAVDIDDTKLEWARTFGATHTVNALE MAB_0983c|M.abscessus_ATCC_199 AVLGLGGVGLAVVMSAAAAGAGEVLAIDPVPAKRELALELGATSACAPDE Mflv_4517|M.gilvum_PYR-GCK AVIGAGAVGQCALRSALALGAARVFAVDPVVARRERAAAAGATPMDSPAA Mvan_1841|M.vanbaalenii_PYR-1 AVIGAGAVGQCALRSAYALGAATVFAVDPVAARRDRAAAAGARAVPAPAA Mb1929|M.bovis_AF2122/97 AVIGLGAVGLCALRSAFIHGAATVFAVDRVKGRLQRAATWGATPIPSPAA Rv1895|M.tuberculosis_H37Rv AVIGLGAVGLCALRSAFIHGAATVFAVDRVKGRLQRAATWGATPIPSPAA MMAR_2790|M.marinum_M AVIGLGAVGLCAVRSALAQGAATVFAVDRVQGRLQRASEWGATAVASPAA MUL_2962|M.ulcerans_Agy99 AVIGLGAVGLCAVRSALAQGAATVFAVDRVQGRLQRAAEWGATAVASPAA MAV_2804|M.avium_104 AVIGLGAVGLCALRSALFQGAATVFAVDQVDGRLARAARWGATPLKAPAL MSMEG_6616|M.smegmatis_MC2_155 TVLGLGPIGDMAARIAHHLG-YEVFAVDRIPERLRRAADRGIQAIDLG-- TH_2319|M.thermoresistible__bu VVLGLGPIGSMACRIAAHRGNCRVIGVDRVPERIEKVRPYCADVLNVDTD .*:* * :* . * * ::.:* : . MLBr_01784|M.leprae_Br4923 LEVVKTIQDLT-----------------------SGFGVDVVIDTVGRPE MAB_0983c|M.abscessus_ATCC_199 APG----------------------------------GHDWVFEVVGSAA Mflv_4517|M.gilvum_PYR-GCK QTILEATD---------------------------GLGADSVIDAVGTDA Mvan_1841|M.vanbaalenii_PYR-1 AAILEATG---------------------------GLGVDSVIDAVGTDT Mb1929|M.bovis_AF2122/97 ETILAATR---------------------------GRGADSVIDAVGTDA Rv1895|M.tuberculosis_H37Rv ETILAATR---------------------------GRGADSVIDAVGTDA MMAR_2790|M.marinum_M EAIVAATG---------------------------GRGADSVIDAVGTDA MUL_2962|M.ulcerans_Agy99 EAIVAATS---------------------------GRGADSVIDAVDTDA MAV_2804|M.avium_104 EAILAATG---------------------------GRGADAVIDAVATDA MSMEG_6616|M.smegmatis_MC2_155 ----AIDEPLG--------DVIR--------SMTHGRGTDAVIDAVGMEA TH_2319|M.thermoresistible__bu DVEAAVREQTGGXXVQTPPDPRRQSADCENHADQHGR-PEHPPEELHHQA : : : MLBr_01784|M.leprae_Br4923 TWKQAFYARDLAGTVVLVGVPTPDMR---------LDMPLLDFFSHGGSL MAB_0983c|M.abscessus_ATCC_199 VLEQAYALTGRGGGTVSVGLPHPDAR---------ISLPALNIVAEGRSI Mflv_4517|M.gilvum_PYR-GCK SIDDALAGVRTGGTVSVVGVHDLTP----------YPLPALVCLLRSLTL Mvan_1841|M.vanbaalenii_PYR-1 SLDDALACVRTGGTVSIVGVHDLQP----------YPLPALVCLLRSLTI Mb1929|M.bovis_AF2122/97 SMSDALNAVRPGGTVSVVGVHDLQP----------FPLPALTCLLRSITL Rv1895|M.tuberculosis_H37Rv SMSDALNAVRPGGTVSVVGVHDLQP----------FPVPALTCLLRSITL MMAR_2790|M.marinum_M SMTDALNAVRAGGTVSVVGVHDLQP----------FPLPALTCLLRSITL MUL_2962|M.ulcerans_Agy99 SMTDALNAVRAGGTVSVVGVHDLQP----------FPLPALTCLLRSITL MAV_2804|M.avium_104 SLTEALNAVRPGGTVSVVGVHDMNP----------FPLNALGCLIRSITL MSMEG_6616|M.smegmatis_MC2_155 HGSPVAKIMQTAAAALPDAVAKPMMENAGVD-----RLDALYSAIDTVRR TH_2319|M.thermoresistible__bu DDQRQRRHERDAATAGSPPLPSPWPDRTTTHRHTWRRLGGMELLRDVVVL .. . : : : MLBr_01784|M.leprae_Br4923 KSSW---------------------------------YGDCLPERDFPTL MAB_0983c|M.abscessus_ATCC_199 LGSY---------------------------------MGSAQPQQDIPAM Mflv_4517|M.gilvum_PYR-GCK R------------------------------------MTTAPVQQTWAEL Mvan_1841|M.vanbaalenii_PYR-1 R------------------------------------LTTAPVQQTWPEL Mb1929|M.bovis_AF2122/97 R------------------------------------MTMAPVQRTWPEL Rv1895|M.tuberculosis_H37Rv R------------------------------------MTMAPVQRTWPEL MMAR_2790|M.marinum_M R------------------------------------LTIAPVQRTWSEL MUL_2962|M.ulcerans_Agy99 R------------------------------------LTIAPVQRTWSEL MAV_2804|M.avium_104 R------------------------------------MTTAPVQRTWPEL MSMEG_6616|M.smegmatis_MC2_155 GGTISLIGVYGG-TADPIP------MLTLFDKQIQLRMGQANVKRWVDDI TH_2319|M.thermoresistible__bu LHIVGFAVTFGAWTAEAVARRFRTTRLMDYGLLLSLITGLALAAPWPAGI . : MLBr_01784|M.leprae_Br4923 VD------------LYLQGRLPLGKFVSERIGLGDVEEAFHKIHGGKVLR MAB_0983c|M.abscessus_ATCC_199 LA------------LWRAGRLPVEKLKSDDLPLSDINIALDALAEGQAVR Mflv_4517|M.gilvum_PYR-GCK VP------------LLQAGRLSVDGIFTDAMPLAEAEAAYAAAFSRSGEH Mvan_1841|M.vanbaalenii_PYR-1 IP------------LLQAGRLSVDGIFTGALPLDDAERAYAAAFSRSAEH Mb1929|M.bovis_AF2122/97 IP------------LLQSGRLDVDGIFTTTLPLDEAAKGYATARARSGEE Rv1895|M.tuberculosis_H37Rv IP------------LLQSGRLDVDGIFTTTLPLDEAAKGYATARARSGEE MMAR_2790|M.marinum_M IP------------LLESGRLDVDGIFTTSLPLDEAAKGYSIAGSRSGND MUL_2962|M.ulcerans_Agy99 IP------------LLESGRLDVDGIFTTSLPLDEAAKGYSIAGSRSGND MAV_2804|M.avium_104 IP------------LLQSGRLDVDGIFTTTMPLDEAAIGYATAGSRSGDD MSMEG_6616|M.smegmatis_MC2_155 MP-----------LLGDDDPLGVDDFATHIL--PIDEAPHAYEIFQKKQD TH_2319|M.thermoresistible__bu VLNYPKIGLKLVLLVALGAVLGIGGAHQRRTGNPVPRPLFVTAGVLSFAA : : * : . MLBr_01784|M.leprae_Br4923 SVVML--------------------------------------------- MAB_0983c|M.abscessus_ATCC_199 QILRPGVSA----------------------------------------- Mflv_4517|M.gilvum_PYR-GCK LKVHLVP------------------------------------------- Mvan_1841|M.vanbaalenii_PYR-1 LKVQLIP------------------------------------------- Mb1929|M.bovis_AF2122/97 LKVLLTP------------------------------------------- Rv1895|M.tuberculosis_H37Rv LRFCLRPDSRDVLGAHETVDLYVHVRRCQSVADLQLEGAADGVDGPSMLN MMAR_2790|M.marinum_M VKVLLKV------------------------------------------- MUL_2962|M.ulcerans_Agy99 VKVLLKV------------------------------------------- MAV_2804|M.avium_104 VKILLKP------------------------------------------- MSMEG_6616|M.smegmatis_MC2_155 GAVKIILKP----------------------------------------- TH_2319|M.thermoresistible__bu AAVAVLW------------------------------------------- .