For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RTVVIDGPGSIRVDNRPDPALPGSDGVIVVVSAAGICGSDLHFYEGEYPLAEPVALGHEAVGTVVEKGPD VHTVEVGDQVMVSSVAGCGACAGCATRDPAMCVSGPQIFGSGALGGAQADLLAVPATDFQVLKIPAAITT EQALLLTDNLATGWAAARRADIPFGATVAVIGLGAVGLCAVRSALAQGAATVFAVDRVQGRLQRAAEWGA TAVASPAAEAIVAATSGRGADSVIDAVDTDASMTDALNAVRAGGTVSVVGVHDLQPFPLPALTCLLRSIT LRLTIAPVQRTWSELIPLLESGRLDVDGIFTTSLPLDEAAKGYSIAGSRSGNDVKVLLKV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2962 | - | - | 100% (341) | dehydrogenase |
M. ulcerans Agy99 | MUL_4777 | - | 2e-29 | 29.94% (324) | zinc-dependent alcohol dehydrogenase |
M. ulcerans Agy99 | MUL_0470 | adhB | 4e-27 | 30.63% (333) | zinc-containing alcohol dehydrogenase NAD- dependent AdhB |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1929 | - | 1e-107 | 84.42% (231) | dehydrogenase |
M. gilvum PYR-GCK | Mflv_4517 | - | 1e-131 | 69.32% (339) | alcohol dehydrogenase |
M. tuberculosis H37Rv | Rv1895 | - | 1e-158 | 80.59% (340) | dehydrogenase |
M. leprae Br4923 | MLBr_01784 | adhE2 | 2e-26 | 36.82% (258) | putative alcohol dehydrogenase (Zn dependent) |
M. abscessus ATCC 19977 | MAB_0983c | - | 5e-32 | 32.19% (320) | zinc-containing alcohol dehydrogenase |
M. marinum M | MMAR_2790 | - | 0.0 | 98.24% (341) | dehydrogenase |
M. avium 104 | MAV_2804 | - | 1e-157 | 80.00% (340) | zinc-binding dehydrogenase |
M. smegmatis MC2 155 | MSMEG_6616 | - | 7e-50 | 34.52% (394) | S-(hydroxymethyl)glutathione dehydrogenase |
M. thermoresistible (build 8) | TH_4349 | - | 6e-34 | 35.69% (325) | PUTATIVE Alcohol dehydrogenase GroES domain protein |
M. vanbaalenii PYR-1 | Mvan_1841 | - | 1e-132 | 70.21% (339) | alcohol dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4517|M.gilvum_PYR-GCK ----------MRTVVVDSQRSIRVDTRPDPRLPGPDGVIVDVTASAICGS Mvan_1841|M.vanbaalenii_PYR-1 ----------MRAVVIDSERRIRVETRPDPQLPGPDGAIVEVTATAICGS MUL_2962|M.ulcerans_Agy99 ----------MRTVVIDGPGSIRVDNRPDPALPGSDGVIVVVSAAGICGS MMAR_2790|M.marinum_M ----------MRTVVIDGPGSIRVDNRPDPALPGSDGVIVAVSAAGICGS Mb1929|M.bovis_AF2122/97 -------------------------------------------------- Rv1895|M.tuberculosis_H37Rv ----------MRAVVIDGAGSVRVNTQPDPALPGPDGVVVAVTAAGICGS MAV_2804|M.avium_104 ----------MRTVVVDGPRSIRVDTRPDPVLPGPDGAIVEVSAAGICGS MSMEG_6616|M.smegmatis_MC2_155 ----------MKAVTWHGRRDVRVDNVPDPKIEQPTDAIIEVTSTNICGS TH_4349|M.thermoresistible__bu ----------MKALRLMDWKSEPELVEVPDPTPGPGQVLVKIGGAGACHS MLBr_01784|M.leprae_Br4923 ------MSQTVRGVISRKKDEPVELVDIVIPDPGPGEAVVDVTACGVCHT MAB_0983c|M.abscessus_ATCC_199 MRIRSAVLHAAPIERPYRDTHPLKVIELELDPPGPGEVLVRIEAAGLCHS Mflv_4517|M.gilvum_PYR-GCK DLHFLDGH----YPIDQPVPIGHEAVGVVVETGSDVTRFTNGDRVLVSSV Mvan_1841|M.vanbaalenii_PYR-1 DLHFLEGH----YPIDQPVSIGHEAVGVVVETGTTVAGFKVGDRVLVSSV MUL_2962|M.ulcerans_Agy99 DLHFYEGE----YPLAEPVALGHEAVGTVVEKGPDVHTVEVGDQVMVSSV MMAR_2790|M.marinum_M DLHFYEGE----YPLAEPVALGHEAVGTVVEKGPDVHTVEVGDQVMVSSV Mb1929|M.bovis_AF2122/97 -------------------------------------------------- Rv1895|M.tuberculosis_H37Rv DLHFYEGE----YPFTEPVALGHEAVGTIVEAGPQVRTVGVGDLVMVSSV MAV_2804|M.avium_104 DLHFYEAD----FPMPDPIALGHEAIGTVVEAGPQVRNVKVGDQVMVSSV MSMEG_6616|M.smegmatis_MC2_155 DLHLYEVLG---AFMNEGDILGHEPMGIVREVGSAVDGLSVGDRVVIPFQ TH_4349|M.thermoresistible__bu DLHLMHDFEPGMMPWQLPFTLGHENAGWVAAVGAGVGTVTEGDAVAVYGP MLBr_01784|M.leprae_Br4923 DLTYREGG----INDRYPFLLGHEAAGTVEVVGPGVTAVEPGDFVILNWR MAB_0983c|M.abscessus_ATCC_199 DLSVVDGN----RIRPVPMALGHEAAGVIAAVGPGVRDVSPGDHVVLVYV Mflv_4517|M.gilvum_PYR-GCK TGCGRCAGCLTLDPVKCVH--------GPQIFG-----------TGLLGG Mvan_1841|M.vanbaalenii_PYR-1 AGCGRCAGCRTQDPVKCVQ--------GPQIFG-----------SGLLGG MUL_2962|M.ulcerans_Agy99 AGCGACAGCATRDPAMCVS--------GPQIFG-----------SGALGG MMAR_2790|M.marinum_M AGCGACAGCATRDPAMCVS--------GPQIFG-----------SGALGG Mb1929|M.bovis_AF2122/97 -----------------------------MIFG-----------AGVLGG Rv1895|M.tuberculosis_H37Rv AGCGVCPGCETHDPVMCFS--------GPMIFG-----------AGVLGG MAV_2804|M.avium_104 AGCGSCAGCATRDPVLCHS--------GFQIFG-----------GGVLGG MSMEG_6616|M.smegmatis_MC2_155 ISCGHCFMCDQKLYTQCETTQVREQGMGAALFGYSE-------LYGSVPG TH_4349|M.thermoresistible__bu WGCGTCERCMGGAENYCEN------PAGAPVLSGG--------AGLGMDG MLBr_01784|M.leprae_Br4923 AVCGQCRACKRGRPSYCFDTFNAQ-QKMTLIDG---------TELTPALG MAB_0983c|M.abscessus_ATCC_199 PSCGACRYCSSGRPALCPDAAAAN-GRGDLIRGGTRLHDLDGTEVRHHLG : . * Mflv_4517|M.gilvum_PYR-GCK AQSDLLAVPAADFQLLAVPDGIGTEEALLLTDNLPTGWAAAKR--ADIPV Mvan_1841|M.vanbaalenii_PYR-1 AQADLMAVPAADFQLLAIPDGIDTEQALLLTDNLATGWAAAKR--ADIPV MUL_2962|M.ulcerans_Agy99 AQADLLAVPATDFQVLKIPAAITTEQALLLTDNLATGWAAARR--ADIPF MMAR_2790|M.marinum_M AQADLLAVPAADFQVLKIPAAITTEQALLLTDNLATGWAAARR--ADILF Mb1929|M.bovis_AF2122/97 AQADLLAVPAADFQVLKIPEGITTEQALLLTDNLATGWAAAQR--ADISF Rv1895|M.tuberculosis_H37Rv AQADLLAVPAADFQVLKIPEGITTEQALLLTDNLATGWAAAQR--ADISF MAV_2804|M.avium_104 AQADLLAVPAADFQLLKIPEGISTEQALLLTDNLATGWAAAQR--ADIPF MSMEG_6616|M.smegmatis_MC2_155 GQAQYLRVPQAQFTHIKVPDGPPDSRYVYLSDVLPTAWQSVAY--AEIPK TH_4349|M.thermoresistible__bu GMAEYLLVP-AERLVVKLPESMTPVTAAALTDAGLTPYHAIRRSWPKLTP MLBr_01784|M.leprae_Br4923 IGAFADKTLVHSGQCTKVDPAADPAVAGLLGCGVMAGLGAAIN-TAAVSR MAB_0983c|M.abscessus_ATCC_199 VSGFADHAVVDRNSVVVIDENVPLDTAALFGCAMLTGFGAVTH-TASVRP . . : : : : . : Mflv_4517|M.gilvum_PYR-GCK GGTVAVIGAGAVGQCALRSALALGAARVFAVDPVVARRERAAAAGATPMD Mvan_1841|M.vanbaalenii_PYR-1 GGTVAVIGAGAVGQCALRSAYALGAATVFAVDPVAARRDRAAAAGARAVP MUL_2962|M.ulcerans_Agy99 GATVAVIGLGAVGLCAVRSALAQGAATVFAVDRVQGRLQRAAEWGATAVA MMAR_2790|M.marinum_M GATVAVIGLGAVGLCAVRSALAQGAATVFAVDRVQGRLQRASEWGATAVA Mb1929|M.bovis_AF2122/97 GSAVAVIGLGAVGLCALRSAFIHGAATVFAVDRVKGRLQRAATWGATPIP Rv1895|M.tuberculosis_H37Rv GSAVAVIGLGAVGLCALRSAFIHGAATVFAVDRVKGRLQRAATWGATPIP MAV_2804|M.avium_104 GGTVAVIGLGAVGLCALRSALFQGAATVFAVDQVDGRLARAARWGATPLK MSMEG_6616|M.smegmatis_MC2_155 GGTVTVLGLGPIGDMAARIAHHLG-YEVFAVDRIPERLRRAADRGIQAID TH_4349|M.thermoresistible__bu TSTAVVIGVGGLGHVAVQLVKATTAARLIAVDNRSEALELAREMGADHVV MLBr_01784|M.leprae_Br4923 DDTVAVIGCGGVGDAAISGAALVGANRIIAVDIDDTKLEWARTFGATHTV MAB_0983c|M.abscessus_ATCC_199 GDSVAVLGLGGVGLAVVMSAAAAGAGEVLAIDPVPAKRELALELGATSAC :..*:* * :* . . ::*:* * * Mflv_4517|M.gilvum_PYR-GCK S-----PAAQTILEATDGLGADSVIDAVGTDAS----------------- Mvan_1841|M.vanbaalenii_PYR-1 A-----PAAAAILEATGGLGVDSVIDAVGTDTS----------------- MUL_2962|M.ulcerans_Agy99 S-----PAAEAIVAATSGRGADSVIDAVDTDAS----------------- MMAR_2790|M.marinum_M S-----PAAEAIVAATGGRGADSVIDAVGTDAS----------------- Mb1929|M.bovis_AF2122/97 S-----PAAETILAATRGRGADSVIDAVGTDAS----------------- Rv1895|M.tuberculosis_H37Rv S-----PAAETILAATRGRGADSVIDAVGTDAS----------------- MAV_2804|M.avium_104 A-----PALEAILAATGGRGADAVIDAVATDAS----------------- MSMEG_6616|M.smegmatis_MC2_155 LGAIDEPLGDVIRSMTHGRGTDAVIDAVGMEAHGSPVAKIMQTAAAALPD TH_4349|M.thermoresistible__bu RS--DEQAVEAIWELTGGRGADVLLDFVGADAT----------------- MLBr_01784|M.leprae_Br4923 NA-LELEVVKTIQDLTSGFGVDVVIDTVGRPET----------------- MAB_0983c|M.abscessus_ATCC_199 AP-DEAPG-----------GHDWVFEVVGSAAV----------------- * * ::: * Mflv_4517|M.gilvum_PYR-GCK -----------------IDDALAGVRTGGTVSVVGVHDLTP-YPLPALVC Mvan_1841|M.vanbaalenii_PYR-1 -----------------LDDALACVRTGGTVSIVGVHDLQP-YPLPALVC MUL_2962|M.ulcerans_Agy99 -----------------MTDALNAVRAGGTVSVVGVHDLQP-FPLPALTC MMAR_2790|M.marinum_M -----------------MTDALNAVRAGGTVSVVGVHDLQP-FPLPALTC Mb1929|M.bovis_AF2122/97 -----------------MSDALNAVRPGGTVSVVGVHDLQP-FPLPALTC Rv1895|M.tuberculosis_H37Rv -----------------MSDALNAVRPGGTVSVVGVHDLQP-FPVPALTC MAV_2804|M.avium_104 -----------------LTEALNAVRPGGTVSVVGVHDMNP-FPLNALGC MSMEG_6616|M.smegmatis_MC2_155 AVAKPMMENAGVDRLDALYSAIDTVRRGGTISLIGVYGGTA-DPIPMLTL TH_4349|M.thermoresistible__bu -----------------IELARAAARPLGDVTIVGIAGGS-----VPLSF MLBr_01784|M.leprae_Br4923 -----------------WKQAFYARDLAGTVVLVGVPTPDMRLDMPLLDF MAB_0983c|M.abscessus_ATCC_199 -----------------LEQAYALTGRGGGTVSVGLPHPDARISLPALNI * * :*: * Mflv_4517|M.gilvum_PYR-GCK LLRSLTLR---MTTAPVQQTWAELVPLLQAGR-LSVDGIFTDAMPLAEAE Mvan_1841|M.vanbaalenii_PYR-1 LLRSLTIR---LTTAPVQQTWPELIPLLQAGR-LSVDGIFTGALPLDDAE MUL_2962|M.ulcerans_Agy99 LLRSITLR---LTIAPVQRTWSELIPLLESGR-LDVDGIFTTSLPLDEAA MMAR_2790|M.marinum_M LLRSITLR---LTIAPVQRTWSELIPLLESGR-LDVDGIFTTSLPLDEAA Mb1929|M.bovis_AF2122/97 LLRSITLR---MTMAPVQRTWPELIPLLQSGR-LDVDGIFTTTLPLDEAA Rv1895|M.tuberculosis_H37Rv LLRSITLR---MTMAPVQRTWPELIPLLQSGR-LDVDGIFTTTLPLDEAA MAV_2804|M.avium_104 LIRSITLR---MTTAPVQRTWPELIPLLQSGR-LDVDGIFTTTMPLDEAA MSMEG_6616|M.smegmatis_MC2_155 FDKQIQLR---MGQANVKRWVDDIMPLLGDDDPLGVDDFATHILPIDEAP TH_4349|M.thermoresistible__bu FSQPYEVS---IQTTYWG-TRPELVELLDLAA-RGLVHVESTTYPLDDAL MLBr_01784|M.leprae_Br4923 FSHGGSLKSSWYGDCLPERDFPTLVDLYLQGR-LPLGKFVSERIGLGDVE MAB_0983c|M.abscessus_ATCC_199 VAEGRSILGSYMGSAQPQQDIPAMLALWRAGR-LPVEKLKSDDLPLSDIN . . : :: * : . : : : Mflv_4517|M.gilvum_PYR-GCK AAYAAAFSRSGEHLKVHLVP------------------------------ Mvan_1841|M.vanbaalenii_PYR-1 RAYAAAFSRSAEHLKVQLIP------------------------------ MUL_2962|M.ulcerans_Agy99 KGYSIAGSRSGNDVKVLLKV------------------------------ MMAR_2790|M.marinum_M KGYSIAGSRSGNDVKVLLKV------------------------------ Mb1929|M.bovis_AF2122/97 KGYATARARSGEELKVLLTP------------------------------ Rv1895|M.tuberculosis_H37Rv KGYATARARSGEELRFCLRPDSRDVLGAHETVDLYVHVRRCQSVADLQLE MAV_2804|M.avium_104 IGYATAGSRSGDDVKILLKP------------------------------ MSMEG_6616|M.smegmatis_MC2_155 HAYEIFQKKQDGAVKIILKP------------------------------ TH_4349|M.thermoresistible__bu QAYRDLRAGRVRGRAVIVP------------------------------- MLBr_01784|M.leprae_Br4923 EAFHKIHGGKVLRSVVML-------------------------------- MAB_0983c|M.abscessus_ATCC_199 IALDALAEGQAVRQILRPGVSA---------------------------- . . Mflv_4517|M.gilvum_PYR-GCK ------------- Mvan_1841|M.vanbaalenii_PYR-1 ------------- MUL_2962|M.ulcerans_Agy99 ------------- MMAR_2790|M.marinum_M ------------- Mb1929|M.bovis_AF2122/97 ------------- Rv1895|M.tuberculosis_H37Rv GAADGVDGPSMLN MAV_2804|M.avium_104 ------------- MSMEG_6616|M.smegmatis_MC2_155 ------------- TH_4349|M.thermoresistible__bu ------------- MLBr_01784|M.leprae_Br4923 ------------- MAB_0983c|M.abscessus_ATCC_199 -------------