For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTDREEPQRHDQERPGGMFRQPTQPPQDWTPPTRPVPAPPPGYPPRPPWPDRPYPQADHPVPPQPSTYTE RIRPADLVPSRKPVPGHGWRLALLKATFGLVNVGPSPDERRAAALETAIRAPLRGHFKVGVMGKGGVGKT TVSACIGSLFAELRHEDRVVAVDADTAFGKLGSRVDPRARRSFWELTADQYLETFADIRNHLGSNAAGLF VLAGEASPARRRVLDAAIYREAMARLDRHFTITVVDCSSTMDSPVTEEVLRDLDALVVVSSPWVDGAAAA GQTLDWLAARGMTTLLQHTVVVLNDSDGHADKRTRKVLAQQFSGHGQLVVEVPFDGHLRPGGVIDGTAQM SRPARRKLVEVCAALAAFYPTQDDRSRERR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0776 | - | - | 100% (380) | hypothetical protein Mflv_0776 |
M. gilvum PYR-GCK | Mflv_0765 | - | 4e-41 | 32.43% (370) | hypothetical protein Mflv_0765 |
M. gilvum PYR-GCK | Mflv_0048 | - | 3e-39 | 31.08% (370) | hypothetical protein Mflv_0048 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3890 | - | 1e-103 | 52.13% (376) | hypothetical protein Mb3890 |
M. tuberculosis H37Rv | Rv3860 | - | 1e-103 | 52.39% (376) | hypothetical protein Rv3860 |
M. leprae Br4923 | MLBr_00798 | - | 9e-41 | 34.26% (324) | hypothetical protein MLBr_00798 |
M. abscessus ATCC 19977 | MAB_0630 | - | 2e-49 | 33.60% (378) | hypothetical protein MAB_0630 |
M. marinum M | MMAR_5436 | - | 1e-110 | 54.71% (382) | hypothetical protein MMAR_5436 |
M. avium 104 | MAV_0163 | - | 1e-119 | 59.01% (383) | hypothetical protein MAV_0163 |
M. smegmatis MC2 155 | MSMEG_0053 | - | 1e-141 | 63.75% (400) | hypothetical protein MSMEG_0053 |
M. thermoresistible (build 8) | TH_0884 | - | 2e-44 | 35.47% (296) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_1725 | secD | 8e-06 | 36.73% (98) | preprotein translocase subunit SecD |
M. vanbaalenii PYR-1 | Mvan_0069 | - | 1e-158 | 73.08% (390) | hypothetical protein Mvan_0069 |
CLUSTAL 2.0.9 multiple sequence alignment MAB_0630|M.abscessus_ATCC_1997 MADTNDNAPDSPPPSGPWREPIADGLGGGDTKGSPFRRSKNSNQEFVPPS TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0776|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0069|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_0053|M.smegmatis_MC2_155 -------------------------------------------------- Mb3890|M.bovis_AF2122/97 -------------------------------------------------- Rv3860|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_5436|M.marinum_M -------------------------------------------------- MAV_0163|M.avium_104 -------------------------------------------------- MLBr_00798|M.leprae_Br4923 -----------------------------------MTTFRERRTMFDAAV MUL_1725|M.ulcerans_Agy99 -------------------------------------------------M MAB_0630|M.abscessus_ATCC_1997 ADYFPQPTLKPPPPLPKAPKLSRRQRNHQRPMNPIWEPDPLSAYGMPQQQ TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0776|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0069|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_0053|M.smegmatis_MC2_155 -------------------------------------------------- Mb3890|M.bovis_AF2122/97 -------------------------------------------------- Rv3860|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_5436|M.marinum_M -------------------------------------------------- MAV_0163|M.avium_104 -------------------------------------------------- MLBr_00798|M.leprae_Br4923 ASYQSGDKTSAGAAFARLTVENPDMSDSWLGRLACGDHNLDTLAGAHQHS MUL_1725|M.ulcerans_Agy99 ASSSAPVHPARYLSVFLVLLIGVYLLVFLTGDKKAAPKLGIDLQGGTRVT MAB_0630|M.abscessus_ATCC_1997 NQAPPAPPQGYGAPVQQPPQNYQPPPQNYYAPPQNYYGPPTDQPATPVAP TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0776|M.gilvum_PYR-GCK -----------------------------------------------MTD Mvan_0069|M.vanbaalenii_PYR-1 ----------------------------------------------MVND MSMEG_0053|M.smegmatis_MC2_155 -----------------------------------------------MAD Mb3890|M.bovis_AF2122/97 -----------------------------------------------MYE Rv3860|M.tuberculosis_H37Rv -----------------------------------------------MYE MMAR_5436|M.marinum_M -----------------------------------------------MNE MAV_0163|M.avium_104 -----------------------------------------------MNE MLBr_00798|M.leprae_Br4923 EVLYSETRRVGLKDGDLRAEIAAPMYLTLTTWSRATIGLAYASALINAGR MUL_1725|M.ulcerans_Agy99 LTARTPDGSAPSREALAQAQQIISARVNGLGVSGSEVVVDGDNLVITVPG MAB_0630|M.abscessus_ATCC_1997 AEPAAPAVPPPAPATQLPAWPASAVVPEQPAPEAPAPARPAEQSPAPEGL TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0776|M.gilvum_PYR-GCK RE-----------------EPQ---------------------------- Mvan_0069|M.vanbaalenii_PYR-1 RD-----------------DPAT--------------------------- MSMEG_0053|M.smegmatis_MC2_155 PDDTLRRELGWTGPEEDDFEPDTGPTRPTLRPEPPSIPGRPPVSPTPPNP Mb3890|M.bovis_AF2122/97 RD------------------------------------------------ Rv3860|M.tuberculosis_H37Rv RD------------------------------------------------ MMAR_5436|M.marinum_M RE------------------------------------------------ MAV_0163|M.avium_104 RD------------------------------------------------ MLBr_00798|M.leprae_Br4923 YDEASVALDDPVVTEDDDAALARQFVMATLFHQTRSWSNVLKVAEVPPQN MUL_1725|M.ulcerans_Agy99 NDGNEARNLGQTARLYIRPVMNSMPAQP---------------------- MAB_0630|M.abscessus_ATCC_1997 DEAAQEQTPVEVPPPAPPAPVAPDPAPQVRADDASAMIPEGLTPWGGRAP TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0776|M.gilvum_PYR-GCK -----------RHDQERPGGMFR-------------------------QP Mvan_0069|M.vanbaalenii_PYR-1 ------DQAAVTPEPPRPREMFR-------------------------QP MSMEG_0053|M.smegmatis_MC2_155 VNPDAEDRVPADPDAERARTTFR-------------------------EP Mb3890|M.bovis_AF2122/97 ------EFLRDRIRPHQPGT------------------------------ Rv3860|M.tuberculosis_H37Rv ------EFLRDRIRPHQPGT------------------------------ MMAR_5436|M.marinum_M ------EFLRDRVRPDQPSVPDASRSHQRSGMHRTATDAS-GPPVAPTHQ MAV_0163|M.avium_104 ------EFLRDRLQPERPSAR----------------------------- MLBr_00798|M.leprae_Br4923 SNTDDRNELTDAVAALASTAASN-------------------------LG MUL_1725|M.ulcerans_Agy99 ------AAQEPQQEPQQPGGTAPAP-----------------------GG MAB_0630|M.abscessus_ATCC_1997 QMPSAPTSPAPSWAPPPAGPPLAPAPPAAFSRADWSAPAAPPRAPYVPGQ TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0776|M.gilvum_PYR-GCK TQ--PPQDWT------PPTRPVPAPP------PGY-PPR--PPWPDRPYP Mvan_0069|M.vanbaalenii_PYR-1 TRPLPPQPRR------PDGWEQQQPP------PGW-APQ--APPSAPPYP MSMEG_0053|M.smegmatis_MC2_155 TQPSPPQQPSQPPPPPPPSALHPRPDPWEQRVPGWNAPQYGPPPGNQPWP Mb3890|M.bovis_AF2122/97 PRGYSPRPPSGDRCPAPPPGRHAAAA------TPPGPPRLPSA-PLRPLP Rv3860|M.tuberculosis_H37Rv PRGYSPRPPSGDRCPAPPPGRHAAAA------TPPGPPRLPSA-PLRPLP MMAR_5436|M.marinum_M PRPAPPRPPTPQPSPVPPRGANPHPP------PPPAPPSVPAP-PPPPVA MAV_0163|M.avium_104 PAPAPPPPPVASR-PAPPRPPTPAPT------PPTRPPAPPTFRPHPPAA MLBr_00798|M.leprae_Br4923 QFQFALELTERVSTTNPQVAADVALNRAWCLRELGDDNAARAALTAAPVN MUL_1725|M.ulcerans_Agy99 PAPNAGQPPESSAPASPQSGAPAAPQSGTPGRPGAQPRPYPQDPPPSPAP MAB_0630|M.abscessus_ATCC_1997 TPFTAAR-PEAPVYRPVPQPQQPSRPQGPSHDQLGLIRSVKPLPKSGWRK TH_0884|M.thermoresistible__bu ----------------------------VDLSTTALLGQRRPAPSRGWRR Mflv_0776|M.gilvum_PYR-GCK ------------QADHP-VPPQP-STYTERIRPADLVPSRKPVPGHGWRL Mvan_0069|M.vanbaalenii_PYR-1 PRP---------QADAPWTAPQP-TSYAEWIRPADLVPHRKVVPGSGWRL MSMEG_0053|M.smegmatis_MC2_155 QAGGFGG----GPGQPPHVPPGPPQSYADRIRASDLVPPKRQPPSGGWRL Mb3890|M.bovis_AF2122/97 DP---------AWPRQ--PEAPPPSTWAD--PALAPIRSRTRPGERGWRR Rv3860|M.tuberculosis_H37Rv DP---------AWPRQ--PEAPPPSTWAD--PALAPIRSRTRPGERGWRR MMAR_5436|M.marinum_M HPPNGHNSPPQAAPHEPMPEVPPPSLWAE--PTPARTPGEPPSTDHGWRH MAV_0163|M.avium_104 AP----------------APAAPPTPRPQ--PSGAPQLP-----DRGWRR MLBr_00798|M.leprae_Br4923 DIPTTHN-----TAEPASRPQPTTFRHPYDDGRDLLVARRRPAAGDGWRK MUL_1725|M.ulcerans_Agy99 APSPAPTGSPAPPATGAQQPADLPPGEEPALPDPRKDLAERIAQEKKWRQ ** MAB_0630|M.abscessus_ATCC_1997 ------AVHRLSGGAINPGESSEESHRSELIDRINLPVRGDYRIAVLSLK TH_0884|M.thermoresistible__bu ------WLYRATFRTVNLGESPKVARHNELLNRVRHPLQDCYRIAVLSLK Mflv_0776|M.gilvum_PYR-GCK ------ALLKATFGLVNVGPSPDERRAAALETAIRAPLRGHFKVGVMG-K Mvan_0069|M.vanbaalenii_PYR-1 ------ALYKASFGLINLGPSPEDKRVAELEATIRTPLRGRFKIGVMG-K MSMEG_0053|M.smegmatis_MC2_155 ------LVYRATFGLVNPGPSAEELRQAELEAKIRGVLRGHYKIGVMG-K Mb3890|M.bovis_AF2122/97 ------MVRLVTFGLVGLGRSGMQRQEAQFEATIRTVLHGNHKVAVLG-K Rv3860|M.tuberculosis_H37Rv ------MVRLVTFGLVGLGRSGMQRQEAQFEATIRTVLHGNHKVAVLG-K MMAR_5436|M.marinum_M ------IIRVASFGLINPRPSAAQRDAAEFEAAIRAPLRGTHKVGVLG-K MAV_0163|M.avium_104 ------ALRLATFGLIDLGPSPAQRREAQFEQAIQARLYGNYKVGVLG-K MLBr_00798|M.leprae_Br4923 ------FVTKATLGRVNPEPSAKAEQTNELHRRICAPLADVHKVAFVSAK MUL_1725|M.ulcerans_Agy99 STNQYIQMVALQFEATQCGKDDILAGNDDPKLPLVTCSTDHKTAYLLAPS : . : . .:. . MAB_0630|M.abscessus_ATCC_1997 GGVGKTTTTFSLGA------TFASLR-GDRVIAVDANPDFGTLAQRGPDE TH_0884|M.thermoresistible__bu GGVGKTTITATLGS------TFGSAR-GDRVVAVDANPDRGTLSQKVPLQ Mflv_0776|M.gilvum_PYR-GCK GGVGKTTVSACIGS------LFAELRHEDRVVAVDADTAFGKLGSRVDPR Mvan_0069|M.vanbaalenii_PYR-1 GGVGKTTVSASIGS------VLAEIRQDDRVVAVDADTAFGKLGSRVDPR MSMEG_0053|M.smegmatis_MC2_155 GGVGKTTVSATIGS------IFAHLRQDDRVVAIDADTSFGKLGSRVDPR Mb3890|M.bovis_AF2122/97 GGVGKTSVAACVGS------ILAELRQQDRIVGIDADTAFGRLSSRIDPR Rv3860|M.tuberculosis_H37Rv GGVGKTSVAACVGS------ILAELRQQDRIVGIDADTAFGRLSSRIDPR MMAR_5436|M.marinum_M GGVGKTSVAASIGS------LLAELRQQDRIVAVDADTAFGRLSSRIDPT MAV_0163|M.avium_104 GGVGKTSVAASVGS------LFAELRRQDHVVAIDADTAFGRLGSRIDPA MLBr_00798|M.leprae_Br4923 GGVGKTTITVALGN------TMARLR-GDRVIAVDVDADLGDLSARFRER MUL_1725|M.ulcerans_Agy99 IISGDQIQNATSGMDQRSIGYVVDLQFKSQAANTWADYTAAHIGTQTAFT *. * . : .: .: . :. : MAB_0630|M.abscessus_ATCC_1997 --------------------------------TRSTARDLLRDPD-IHRY TH_0884|M.thermoresistible__bu --------------------------------TRATVRDLLRDADRIQTY Mflv_0776|M.gilvum_PYR-GCK --------------------------------ARRSFWELTADQY-LETF Mvan_0069|M.vanbaalenii_PYR-1 --------------------------------AQGSFWELAADRH-LEAF MSMEG_0053|M.smegmatis_MC2_155 --------------------------------AHGSYWELTSDKN-LETF Mb3890|M.bovis_AF2122/97 --------------------------------AAGSFWELTTDTN-LRSF Rv3860|M.tuberculosis_H37Rv --------------------------------AAGSFWELTTDTN-LRSF MMAR_5436|M.marinum_M --------------------------------ARGSFWDLTADRN-LASF MAV_0163|M.avium_104 --------------------------------STGSFWELTADQN-LRSF MLBr_00798|M.leprae_Br4923 GG------------------------------PQTNIEHFVSARN-AKRY MUL_1725|M.ulcerans_Agy99 LDSQVVSAPQILEAIPGGRTQISGGEPPFSASTARQLANVLKYGSLPLSF . .. : MAB_0630|M.abscessus_ATCC_1997 SDVRRHTSQSASRLEVLASERDPAASELFSEADYLAVMRILQRFYNIILT TH_0884|M.thermoresistible__bu SDMRAYTSQSPSRLEVLASESDPAVSEAFSSDDYTRTLRVLERFYSLVLT Mflv_0776|M.gilvum_PYR-GCK ADIRNHLGSNAAGLFVLAGEASPARRRVLDAAIYREAMARLDRHFTITVV Mvan_0069|M.vanbaalenii_PYR-1 ADIRNHLGCNAAGLFVLAGEATPARRRVLDPAIYREATTRLDRHFTISVI MSMEG_0053|M.smegmatis_MC2_155 ADVRSRVGNNSAGLFVLAGESTPARRRVLDAAIYREAVTRLDKHFSISVV Mb3890|M.bovis_AF2122/97 TDITARLGRNSAGLYVLAGQPASGPRRALDPAIYREAALRLDHHFAISVI Rv3860|M.tuberculosis_H37Rv TDITARLGRNSAGLYVLAGQPASGPRRVLDPAIYREAALRLDHHFAISVI MMAR_5436|M.marinum_M ADVVARLGRNAAGLHVLPGEAAVGGRRLLDPAIYREAALRLDRHFTISII MAV_0163|M.avium_104 DDVVARLGRNAAGLHVLGGEPASGPRRVLDPAIYREATRRLDRHFTISVI MLBr_00798|M.leprae_Br4923 ADVRVHTVMNNDRLEMLGAQNDPRSTYRLGPDDYETAMKILENHCNVILL MUL_1725|M.ulcerans_Agy99 ESSEAQTVSATLGLTSLRAGLIAGAIGLALVLLYSLLYYRVLGLLTALSL . * * . * : MAB_0630|M.abscessus_ATCC_1997 DCGTGLMHSAMAGVLGEANAIVLVT--SPAIDGARSALATLDWLDHHGYS TH_0884|M.thermoresistible__bu DCGTGLIHSAMSAVLANADVLIVIS--SGSVDGARSAAATLDWLDAHGHQ Mflv_0776|M.gilvum_PYR-GCK DCSSTMDSPVTEEVLRDLDALVVVS--SPWVDGAAAAGQTLDWLAARGMT Mvan_0069|M.vanbaalenii_PYR-1 DCSSTMDSPVTQEVLRDLDALVVVS--SPWVDGAAAAGQTLDWLAARGLT MSMEG_0053|M.smegmatis_MC2_155 DCSSTMDSPVTQEVLRDLDALIVVS--SPWVDGAATAGQTLDWLSANGMT Mb3890|M.bovis_AF2122/97 DCGSSMEAAVTQEVLRDVDALIVVS--SPWADGASAAANTIEWLSDYGLT Rv3860|M.tuberculosis_H37Rv DCGSSMEAAVTQEVLRDVDALIVVS--SPWADGASAAANTIEWLSDYGLT MMAR_5436|M.marinum_M DCGSTMDAPLTQEVLRDLDALIVVS--SPWADGASAAAKTMEWLADRKLS MAV_0163|M.avium_104 DCGSTMDAPLTQEVLRDLDALIVVS--SPWADGASAAARTLEWLADHGLT MLBr_00798|M.leprae_Br4923 DCGTPVNGPLFNKIVSTVTGLVVVA--SDDVRGVEGALATLDWLDAHGYA MUL_1725|M.ulcerans_Agy99 IASGAMVFAILVLLGRYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKD .. : . : : :: : * : :: : MAB_0630|M.abscessus_ATCC_1997 HLVRQSVVAISSSRPGASSIDLEQLSRHFLTRARAVHIIPFDNHLS---- TH_0884|M.thermoresistible__bu DMVRNSIAVINAVRPRSGKVDLQKVVDHFSRRCRAVKMVPFDPHLE---- Mflv_0776|M.gilvum_PYR-GCK TLLQHTVVVLNDSDGHADKRTRKVLAQQFSGHGQLVVEVPFDGHLR---- Mvan_0069|M.vanbaalenii_PYR-1 DLLQRTVVVLNDSDGHADKRTRGILAQQFSGHGQLVIEVPFDGHLR---- MSMEG_0053|M.smegmatis_MC2_155 RLLQRTVVVLNDSDGHADKRTRSILLNQFAGQGQAVVEIPFDGHLR---- Mb3890|M.bovis_AF2122/97 GLLRRSIVVLNDSDGHADKRTKSLLAQEFIDHGQPVVEVPFDPHLR---- Rv3860|M.tuberculosis_H37Rv GLLRRSIVVLNDSDGHADKRTKSLLAQEFIDHGQPVVEVPFDPHLR---- MMAR_5436|M.marinum_M GLLRRSVVVLNDSDGHSDKRTRSVLAREFVDHGQQVVEVPFDPHLR---- MAV_0163|M.avium_104 TLLAHSLVVLNDSDGHADKRTRALLAREFIDHGRPVIEVPFDPHLR---- MLBr_00798|M.leprae_Br4923 RLLQHTVVVLNAIQKTKPFVDFGIVENQFRKRVPDFYPMPYDPHLA---- MUL_1725|M.ulcerans_Agy99 EIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAF : . . . :: MAB_0630|M.abscessus_ATCC_1997 ----------------EGSEIS-LDLMGKKTRMAFMELAGSVADGFYEGG TH_0884|M.thermoresistible__bu ----------------EGAEID-LDQLKPQTRQALLELAAVVADGFPGAQ Mflv_0776|M.gilvum_PYR-GCK ----------------PGGVIDGTAQMSRPARRKLVEVCAALAAFYPTQD Mvan_0069|M.vanbaalenii_PYR-1 ----------------PGGVIDGTGEMSPSARRKFIEVVAALAAFFPASV MSMEG_0053|M.smegmatis_MC2_155 ----------------PGGVVD-IQEMSPKVRRKFLEVAAALADHFPTSD Mb3890|M.bovis_AF2122/97 ----------------PGGVIDMSHEMAPTTRLKILQVAATVTAYFASRP Rv3860|M.tuberculosis_H37Rv ----------------PGGVIDMSHEMAPTTRLKILQVAATVTAYFASRP MMAR_5436|M.marinum_M ----------------PGGVIDVSHELEPGTRLKFLQIAATITGHFAARS MAV_0163|M.avium_104 ----------------PGGVIDVNGEMAPATRRKFLEVTATIAGYFARRP MLBr_00798|M.leprae_Br4923 ----------------TGLAVEYTSLKR-KTRKALKELVGGVAQYYPVIR MUL_1725|M.ulcerans_Agy99 TLGLTTILDIVVVFLVTWPLVYLASKSPRLAKPAYNGLGAVQQVARERRA : .: : . MAB_0630|M.abscessus_ATCC_1997 NTRQTSWG---------------- TH_0884|M.thermoresistible__bu QLQSPPF----------------- Mflv_0776|M.gilvum_PYR-GCK DRSRERR----------------- Mvan_0069|M.vanbaalenii_PYR-1 TRSG-------------------- MSMEG_0053|M.smegmatis_MC2_155 DHTRERS----------------- Mb3890|M.bovis_AF2122/97 ADAHGSPPR--------------- Rv3860|M.tuberculosis_H37Rv ADAHGSPPR--------------- MMAR_5436|M.marinum_M AADDDPRPTENVASET-------- MAV_0163|M.avium_104 DRSADRHPPQH------------- MLBr_00798|M.leprae_Br4923 AQQRDEDGLGTWIETIRQVEMTSR MUL_1725|M.ulcerans_Agy99 SDSRTRSGIAKTGRE---------