For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MISNPWRHPPGVPRCEAPRAEGTFFLPDGRRLGYAEFGDPTGDVVLWFHGTPGGRRQLPIVGRRAAERLG LRVVLVERAGAGLSSAHRYDRIGDWADDMAHVADALGADKLGVAGLSGGGPYALACAGMPALRDRVAAVA VLGGVTPSVGPDATASGAITLARQLSAVTSALRRPFAAVTAGLLTPVIPLAHLAYSGLAAVMPDGDKRVF ANPEIEAMFIDDIVQVANGRFQALLDDARLFGVDWGFRLADVAVPVRWWHGDADSIISLADAQAAAEHLP DVDLLLMPDESHLGGFAKADDVLAFLAPHLRHDDEQHRRKV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0111 | - | - | 100% (321) | alpha/beta hydrolase fold |
M. gilvum PYR-GCK | Mflv_3278 | - | 3e-67 | 42.51% (287) | alpha/beta hydrolase fold |
M. gilvum PYR-GCK | Mflv_3121 | - | 3e-06 | 32.84% (134) | transcriptional regulator, CadC |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1223 | - | 7e-66 | 42.56% (289) | hypothetical protein Mb1223 |
M. tuberculosis H37Rv | Rv1191 | - | 7e-66 | 42.56% (289) | hypothetical protein Rv1191 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_3390 | - | 1e-114 | 63.11% (309) | hydrolase |
M. avium 104 | MAV_1342 | - | 7e-68 | 42.21% (289) | hydrolase, alpha/beta hydrolase fold family protein |
M. smegmatis MC2 155 | MSMEG_3508 | - | 5e-71 | 45.49% (288) | hydrolase, alpha/beta hydrolase fold family protein |
M. thermoresistible (build 8) | TH_2940 | - | 1e-110 | 62.21% (299) | PUTATIVE alpha/beta hydrolase fold |
M. ulcerans Agy99 | MUL_2678 | - | 6e-22 | 30.60% (268) | hypothetical protein MUL_2678 |
M. vanbaalenii PYR-1 | Mvan_0797 | - | 1e-159 | 86.45% (310) | alpha/beta hydrolase fold |
CLUSTAL 2.0.9 multiple sequence alignment Mb1223|M.bovis_AF2122/97 -----------MAVAIARPKLEGNIAVGEDRRIGFAEFGAPQGRAVFWLH Rv1191|M.tuberculosis_H37Rv -----------MAVAIARPKLEGNIAVGEDRRIGFAEFGAPQGRAVFWLH MAV_1342|M.avium_104 -----------MAIEIARPKLEGNVAVGEDRQIGFAEFGDPQGRAMFWLH MSMEG_3508|M.smegmatis_MC2_155 ---------MAMVIPIDRPKLEGNVAVGDDRRLGFAEFGDPQGRAIFWLH Mflv_0111|M.gilvum_PYR-GCK -MISNPWRHPPGVPRCEAPRAEGTFFLPDGRRLGYAEFGDPTGDVVLWFH Mvan_0797|M.vanbaalenii_PYR-1 -MLSNPWRHPPGVPRCEPPRAEGAFFLPDGRRIGYAEYGDPSGPVVLWFH MMAR_3390|M.marinum_M MKLSNPLRHPFFVPRVEKPRAEGRFYLPDGRRLGFAEFGDPAGAVVLWFH TH_2940|M.thermoresistible__bu ------------VPPTEKPRAEGRVHLPTGRRLGFAEFGDPAGVPVVWLH MUL_2678|M.ulcerans_Agy99 ---------MQTLPEDIRADEANVVTLPDGRELACLEWGDPTGYPTFYFH . . . : .*.:. *:* * * .::* Mb1223|M.bovis_AF2122/97 GTPGARRQIPTEARVYAEHHNIRLIGVDRPGIGASTPHQYETILAFADDL Rv1191|M.tuberculosis_H37Rv GTPGARRQIPTEARVYAEHHNIRLIGVDRPGIGASTPHQYETILAFADDL MAV_1342|M.avium_104 GTPGARRQIPVEARLYAENHKIRLIGLDRPGIGSSTPHRYQNIRAFGEDL MSMEG_3508|M.smegmatis_MC2_155 GTPGARRQIPTEARAYAEQNGVRLIGVDRPGIGSSTPHQYECVLDFASDL Mflv_0111|M.gilvum_PYR-GCK GTPGGRRQLPIVGRRAAERLGLRVVLVERAGAGLSSAHRYDRIGDWADDM Mvan_0797|M.vanbaalenii_PYR-1 GTPGGRRQLPIVGRRAAEKLGLRVVLVERAGSGLSHRHCYDRVGDWATDM MMAR_3390|M.marinum_M GTPGARRQFPLLGRRAAEEFGLRVVVVERPGSGLSDCHAYTAMADWATDM TH_2940|M.thermoresistible__bu GTPGGRRQFPLTGRRAAEQLGLRVVLLERPGAGLSDPYRYRSVADWVTDV MUL_2678|M.ulcerans_Agy99 GTLSSRLEG-AFADGAARRARFRLIAVDRPGYGRSTFQEGRTLRDWPADV ** ..* : . *.. .*:: ::*.* * * : : *: Mb1223|M.bovis_AF2122/97 RTIADTLGIDKMAVVGLSGGGPYTLACAAG--LPDRVVAAGVLGGVAPTR Rv1191|M.tuberculosis_H37Rv RTIADTLGIDKMAVVGLSGGGPYTLACAAG--LPDRVVAAGVLGGVAPTR MAV_1342|M.avium_104 RTIADTLGIDKMAVIGLSGGGPYALASAAV--LPDRVVAAGILGGVAPFL MSMEG_3508|M.smegmatis_MC2_155 RTIADTLGIDKLAVIGLSGGGPYTLACAAA--MPDRVVAAGVLGGVAPMV Mflv_0111|M.gilvum_PYR-GCK AHVADALGADKLGVAGLSGGGPYALACAGMPALRDRVAAVAVLGGVTPSV Mvan_0797|M.vanbaalenii_PYR-1 AHVADLLGAEKLGVVGLSGGGPFALACAGMPALADRVVAVAVLGGVTPSV MMAR_3390|M.marinum_M TAVANALGAERLAVVGLSGGGPYALACGAVAPLASRVATVAVLGGIVPSV TH_2940|M.thermoresistible__bu TYVADAIGAERLAVVGLSGGGPYALACGAVAPLAERVRSIAVLGGVTPSV MUL_2678|M.ulcerans_Agy99 CALADALGLDKFGVVGHSGAGTHLFACGAR-IALSRLAFIGALGPWGPLA :*: :* :::.* * **.*.. :*... .*: . ** * Mb1223|M.bovis_AF2122/97 GPDAISGGLMRLGSAVAPLLQVGGTPLRLGASLLIRAARPVASPALDLYG Rv1191|M.tuberculosis_H37Rv GPDAISGGLMRLGSAVAPLLQVGGTPLRLGASLLIRAARPVASPALDLYG MAV_1342|M.avium_104 GDEGITSGLMNLGKRVAPLLKLGGDPLRIGASLVVRAIRPVANPALYLYA MSMEG_3508|M.smegmatis_MC2_155 GPDAISSPLMQLGAVVAPVLQVAGGPIRLVASGMIRLIRPVASPALEIYA Mflv_0111|M.gilvum_PYR-GCK GPDATASGAITLARQLSAVTSALRRPFAAVTAGLLTPVIPLAHLAYSGLA Mvan_0797|M.vanbaalenii_PYR-1 GPDAACSGAITLSRKFAPVTSAMRRPFAAVTAGLLTPVIPLAHLAYRGLS MMAR_3390|M.marinum_M GPDATADAVTDLARRFTPILSELRRPLAALAAGLL-PLVPVSHYLYRAYA TH_2940|M.thermoresistible__bu GPDASATGAIELARRFTSLLGTLRGPLATTLAGLVTPVLPFAHFACQAYA MUL_2678|M.ulcerans_Agy99 TPEIMGS-LNLADRSYARLAQHGPRLFHALFAPLGWCAKYAPGLFTKLIT : : : : : : . Mb1223|M.bovis_AF2122/97 LLSPRADRHLLARPEFKAMFLDDLLNGSRKQLAAPFADVIAFARDWGFRL Rv1191|M.tuberculosis_H37Rv LLSPRADRHLLARPEFKAMFLDDLLNGSRKQLAAPFADVIAFARDWGFRL MAV_1342|M.avium_104 AISPEGDRRLLTRPEFGAMFLDDLLNGSRKQLAAPFNDIILFTQDWGFRL MSMEG_3508|M.smegmatis_MC2_155 RLSPEGDRRMLGRPEFKAMFLDDLLNGSRKQLAAPFYDIVVFERDWGFRL Mflv_0111|M.gilvum_PYR-GCK AVMPDGDKRVFANPEIEAMFIDDIVQVANGRFQALLDDARLFGVDWGFRL Mvan_0797|M.vanbaalenii_PYR-1 AAMPEGDKRVFANPEIEAMFIDDIVHAANGGFQALLDDARLFGRDWGFRL MMAR_3390|M.marinum_M SITPEGDQQVFADPELEAVFLDDIVLVVKSRCQAMIDDLRLFGRDWGFRL TH_2940|M.thermoresistible__bu SISPESDRRVLHDPEMEAMFIDDLVLAARGGLRAIVDDARLFGRDWGFRL MUL_2678|M.ulcerans_Agy99 ASVPAVDKHRMRDKRFVQHFQAVQLEAFRQGSRGAAYEAFLEYRPWEFDP * *:: : .: * : . . : * * Mb1223|M.bovis_AF2122/97 DEVKVPVRWWHGDHDHIVPFSHGEHVVSRLPDAKLLHLPGESHLAGLGRG Rv1191|M.tuberculosis_H37Rv DEVKVPVRWWHGDHDHIVPFSHGEHVVSRLPDAKLLHLPGESHLAGLGRG MAV_1342|M.avium_104 DQVKVPVRWWHGDSDHIVPFAHGQHVVSLLPDAELFVLPGESHLGGLGRG MSMEG_3508|M.smegmatis_MC2_155 DEVTVPVRWWHGDHDHIVPFAHGQHVVSRLQDAKLTELPYESHLGGLGCA Mflv_0111|M.gilvum_PYR-GCK ADVAVPVRWWHGDADSIISLADAQAAAEHLPDVDLLLMPDESHLGGFAKA Mvan_0797|M.vanbaalenii_PYR-1 ADVKVPVRWWHGDADSIISLADAQAATEHLPDVELLLMPDESHLGGFAKA MMAR_3390|M.marinum_M PDVTVPVRWWHGDADPLVPLAAARAAIARLPNAELIARPGESHLGGFAAA TH_2940|M.thermoresistible__bu ADVRAPVRWWHGDSDHIVTLTDAQKAVERLPDAELVLRLEESHLGGFAAA MUL_2678|M.ulcerans_Agy99 SEVDVPTHIWLGTHDSFVPREMGEYLERVIPNVELHWAAGKGHFN-VEDW :* .*.: * * * ::. .. : :..* :.*: . Mb1223|M.bovis_AF2122/97 EEILSTLMQIWDRDLRK----- Rv1191|M.tuberculosis_H37Rv EEILSTLMQIWDRDLRK----- MAV_1342|M.avium_104 EEILSTLTKIWDEQN------- MSMEG_3508|M.smegmatis_MC2_155 QEIMGTMLQIWDETSALT---- Mflv_0111|M.gilvum_PYR-GCK DDVLAFLAPHLRHDDEQHRRKV Mvan_0797|M.vanbaalenii_PYR-1 DDVLDFLHQHLLSG---HRP-- MMAR_3390|M.marinum_M DEVLQFVRSSL----------- TH_2940|M.thermoresistible__bu DEVLTFVRESL----------- MUL_2678|M.ulcerans_Agy99 DAIFAACAADI----------- : ::