For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. bovis AF2122 / 97 Mb0460 (-)

annotation: transcriptional regulatory protein
coordinates: 543161 - 543871
length: 236

VRYPLAVAQLGFQRARTEENKRQRAAALVEAARSLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEV
LLHLAAEGWARWSGTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVDVDRVIEVKR
TSIAAVIALVDAIESALPALGRSGAFDILLAAYSLAATLWQIANPPERLTDAYAEEPELLPPEWNLDFAA
ALTRLLTATLLGLLAGSPCECRSPTR
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0460--100% (236)transcriptional regulatory protein
M. bovis AF2122 / 97Mb1561-6e-0527.68% (177) transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_3251-7e-0630.43% (92) TetR family transcriptional regulator
M. tuberculosis H37RvRv0452-1e-131100.00% (236) transcriptional regulatory protein
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2299c-2e-8369.72% (218) transcriptional regulator
M. marinum MMMAR_0773-1e-10785.46% (227) putative regulatory protein
M. avium 104MAV_4698-8e-8777.89% (199) transcriptional regulator, TetR family protein
M. smegmatis MC2 155MSMEG_2898-7e-0535.71% (56) transcriptional regulator, TetR family protein
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_3981-2e-0628.66% (164) putative regulatory protein
M. vanbaalenii PYR-1Mvan_2569-7e-0525.79% (159) TetR family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mb0460|M.bovis_AF2122/97            -----------------MRYPLAVAQLGFQRARTEENKRQRAAALVEAAR
Rv0452|M.tuberculosis_H37Rv         -----------------MRYPLAVAQLGFQRARTEENKRQRAAALVEAAR
MMAR_0773|M.marinum_M               MRKGTVPGRHYPRKSRSVRYPLAVAQLTFRRARTEENKRQRAAALVEAAR
MAV_4698|M.avium_104                ---------------------------------------------MEAAR
MAB_2299c|M.abscessus_ATCC_199      -----------------------MAQLTFQRARTDEKKRQRAAAIVEAAR
MUL_3981|M.ulcerans_Agy99           -----------------------MGGRRVKPGPRDE-KGVLAAQILSVAR
Mvan_2569|M.vanbaalenii_PYR-1       -----------------------MS--KIPPGPRDE-RGVLSSRILVAAR
MSMEG_2898|M.smegmatis_MC2_155      -----------------------------MPRVSREQMQSNRAAVVQAAS
Mflv_3251|M.gilvum_PYR-GCK          -------------------MSAETRSSGRRKLPKQERSREMVAKIVQTTA
                                                                                 : .: 

Mb0460|M.bovis_AF2122/97            SLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVLLHLAAEGWARWS
Rv0452|M.tuberculosis_H37Rv         SLALETGVASVTLTAVAGRAGIHYSAVRRYFTSHKEVLLHLAAEGWARWS
MMAR_0773|M.marinum_M               SMASETGVASVTLTAVASRAGIHYSAVRRYFTSHKEVLLHLAAEGWQRWS
MAV_4698|M.avium_104                SLALETGVASVTLTAVARRAGIHYSAVRRYFTSHKEVLLHLSAEGWVRWS
MAB_2299c|M.abscessus_ATCC_199      SLAVESGVTSVTLTAVANRAGVHYSAVRRYFSSHKEVLLHLAAEGWTRWS
MUL_3981|M.ulcerans_Agy99           DSFAENGSAGTTVRSVARAADVDPSLIYHYFGS-KEGLLDAATMPPQRWL
Mvan_2569|M.vanbaalenii_PYR-1       GAFADTGYAGTTIRAVARAADVDPALVYHYFGS-KEALLDAATDPPQRWL
MSMEG_2898|M.smegmatis_MC2_155      ELIRERGMADVTVDAISARAGLTHGSFHKQFASKQALLLEAICAAVDQRR
Mflv_3251|M.gilvum_PYR-GCK          ALLIKTEPEQVTTNLIADRAGISKGSIYQYFSDKEEIIEAAVEHLAAQQA
                                        .     .*   ::  *.:  . . : * . :  :         :  

Mb0460|M.bovis_AF2122/97            GTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVDVD
Rv0452|M.tuberculosis_H37Rv         GTVCEQLGEPGPMSAPRVAEALANGLAADPLFCDLLANLHLHLEQEVDVD
MMAR_0773|M.marinum_M               NTVCGELSQPGPMTESRVAAALADGLAADPLFCDLLANLHLHLEHEVEVD
MAV_4698|M.avium_104                NTVSDKLAQPGAATPSRIAETLADALADDPLFCDLLANLHLHLEHEVDAE
MAB_2299c|M.abscessus_ATCC_199      ATVCAALAEPGPGSPARVAESLVHGLVDDPLFCDLLANQHLHLEHEVDVE
MUL_3981|M.ulcerans_Agy99           DTVAETWTTPKADLGRRLLQTLLDSWADDEIGPSLRAILLTAAHEDATRL
Mvan_2569|M.vanbaalenii_PYR-1       QNVARAWTTPVPQLGAALVRLMLDAWADEEIGPVLRAILQTAAHEAATRE
MSMEG_2898|M.smegmatis_MC2_155      AAVQKTVEEHGSDAPDVLKDWYLSEEHRDNPATGCAVAALVGHAATVTDD
Mflv_3251|M.gilvum_PYR-GCK          PEIEEMLRSVTMSRPEVAMESSIDILIDFTIANRRLIRYLAERPDHVRTF
                                      :                                           .   

Mb0460|M.bovis_AF2122/97            RVIEVKRTSIAAVIALVD-AIESALPALGRSGAFDILLAAYSLAATLWQI
Rv0452|M.tuberculosis_H37Rv         RVIEVKRTSIAAVIALVD-AIESALPALGRSGAFDILLAAYSLAATLWQI
MMAR_0773|M.marinum_M               RVVEVKRTSTAAVIALAD-AIENALPALGRAGAFDVLLAAYSLGATLWQI
MAV_4698|M.avium_104                RVVEVKRISTAATLSLAD-SIQRALPELGRSGSLDILLAAYSLAATLWQV
MAB_2299c|M.abscessus_ATCC_199      RVAEVKQISNVAVMSIAE-SIERTLPEIGRKGSLDILVAGFSLAAMLWQI
MUL_3981|M.ulcerans_Agy99           KLRRIVESSLIGVSQLDT-DED---DRLTRSGLIASQLIGLAMTRYVWQI
Mvan_2569|M.vanbaalenii_PYR-1       KLRLVVERSLMGVSQLGV-DER---DRMLRSGLISSQIMGLAMMRYVWRI
MSMEG_2898|M.smegmatis_MC2_155      ALRDAYCRAVGDLLAMIE-DGG----TADAFGEVALMVGALELAR-----
Mflv_3251|M.gilvum_PYR-GCK          EAISGLNATLLAMATLHMGHYRDQYRDELSPRALAWLFFNMAVATTLRYI
                                            :      :                 .   .    :       

Mb0460|M.bovis_AF2122/97            ANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECR
Rv0452|M.tuberculosis_H37Rv         ANPPERLTDAYAEEPELLPPEWNLDFAAALTRLLTATLLGLLAGSPCECR
MMAR_0773|M.marinum_M               ANPPQRLTDVYAEEPDVLPPEWNLDFAAALTRLLTATCCGLTAKSS----
MAV_4698|M.avium_104                ANPPERLTDAYAEEPEVVPPEWNLDFASALTRLLTATCIGLIPQSA----
MAB_2299c|M.abscessus_ATCC_199      AHPPEGLEHDYRSEP-GVPPDWSLDFEPALTRLLTATCIGIVEQKH----
MUL_3981|M.ulcerans_Agy99           E-PIASMSDS--EVLAAITPNLQRYIDGDLHPTKNSPAQRPRRTRRP---
Mvan_2569|M.vanbaalenii_PYR-1       E-PVASMDDD--ELVAAVAPNLQRYISDDLG-------------------
MSMEG_2898|M.smegmatis_MC2_155      --------------ATKGTPLSARFLESARQRLSRQE-------------
Mflv_3251|M.gilvum_PYR-GCK          EADDP-------ISLDELRSGLKFASTGLLAGAVSGGHVGEPGPS-----
                                                       .                              

Mb0460|M.bovis_AF2122/97            SPTR
Rv0452|M.tuberculosis_H37Rv         SPTR
MMAR_0773|M.marinum_M               ----
MAV_4698|M.avium_104                ----
MAB_2299c|M.abscessus_ATCC_199      ----
MUL_3981|M.ulcerans_Agy99           ----
Mvan_2569|M.vanbaalenii_PYR-1       ----
MSMEG_2898|M.smegmatis_MC2_155      ----
Mflv_3251|M.gilvum_PYR-GCK          ----