For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPRVSREQMQSNRAAVVQAASELIRERGMADVTVDAISARAGLTHGSFHKQFASKQALLLEAICAAVDQR RAAVQKTVEEHGSDAPDVLKDWYLSEEHRDNPATGCAVAALVGHAATVTDDALRDAYCRAVGDLLAMIED GGTADAFGEVALMVGALELARATKGTPLSARFLESARQRLSRQE
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_2898 | - | - | 100% (184) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_5567 | - | 3e-07 | 32.18% (87) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_2290 | - | 5e-07 | 27.71% (166) | transcriptional regulator, TetR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3885 | ethR | 3e-07 | 31.71% (82) | transcriptional regulatory repressor protein (TETR-family) |
| M. gilvum PYR-GCK | Mflv_4384 | - | 2e-07 | 27.81% (169) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv3855 | ethR | 4e-07 | 31.71% (82) | transcriptional regulatory repressor protein (TETR-family) |
| M. leprae Br4923 | MLBr_00064 | - | 2e-06 | 25.97% (77) | putative transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_1136 | - | 3e-07 | 31.25% (112) | transcriptional regulator TetR |
| M. marinum M | MMAR_0470 | - | 2e-10 | 29.21% (178) | transcriptional regulatory protein |
| M. avium 104 | MAV_5267 | - | 8e-08 | 29.67% (91) | transcriptional regulator, TetR family protein |
| M. thermoresistible (build 8) | TH_3160 | - | 8e-09 | 29.89% (174) | PUTATIVE putative regulatory protein, TetR |
| M. ulcerans Agy99 | MUL_1119 | - | 1e-10 | 29.21% (178) | transcriptional regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_1961 | - | 4e-08 | 29.71% (175) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0470|M.marinum_M -----------------MTPPSTSTPK-RGGTREKMLISAAQVMRERGAA
MUL_1119|M.ulcerans_Agy99 -----------------MTPPSTSTPK-RGGTREKMLISAAQVMRERGAA
TH_3160|M.thermoresistible__bu -----------------MGVEVTRRRDPQSGPRAAMLRSAVALMRRQGVA
Mflv_4384|M.gilvum_PYR-GCK MPSVVSVTESYVTLSIVMTTDIGRPRN--RAIADAVLRATVELLAESSYA
Mvan_1961|M.vanbaalenii_PYR-1 ---------------------MGRPRN--RAIDDAVLRATVELISESSYA
Mb3885|M.bovis_AF2122/97 -------MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLA
Rv3855|M.tuberculosis_H37Rv -------MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLA
MLBr_00064|M.leprae_Br4923 -------MINSTAGQTSQSRSRRSTRPSGDDRELAILATAEQLLEDRPLT
MAV_5267|M.avium_104 --------------MPTDPNGPAAPRRRSEKSRTAIVTATRELLLERGFD
MSMEG_2898|M.smegmatis_MC2_155 --------------------MPRVSREQMQSNRAAVVQAASELIRERGMA
MAB_1136|M.abscessus_ATCC_1997 --------------MTSLSFRRARSEENKRQRAATIVEAARALALESGVA
:: :: :
MMAR_0470|M.marinum_M GVTIDSVLARSGAPRGSVYYHFPDGRNQIL---IEALRYAGDSITAVIDK
MUL_1119|M.ulcerans_Agy99 GVTIDSVLARSGAPRGSVYYHFPDGRNQIL---IEALRYAGDSITAVIDK
TH_3160|M.thermoresistible__bu ATSFADVLADSGAPRGSIYHHFPAGKAQLI---EEATRTAAAQLTERVAR
Mflv_4384|M.gilvum_PYR-GCK ELSLDAVAARAGTSKPAIYRRWR-GKAHLV---HEAVFPLGADTAIPGSG
Mvan_1961|M.vanbaalenii_PYR-1 ELSLDAIAARAGTSKPAIYRRWR-GKAHLV---HEAVFPVDATIEIPRTG
Mb3885|M.bovis_AF2122/97 DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAEN
Rv3855|M.tuberculosis_H37Rv DISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAEN
MLBr_00064|M.leprae_Br4923 EISVDYLAKSAGISRPTFYFYFASKEAVLLTLLDRVFNKANAALETLIKN
MAV_5267|M.avium_104 GLTIEAVAARAGVGKQTIYRWWPTRPALVA----DVMLEDADRLLASVEH
MSMEG_2898|M.smegmatis_MC2_155 DVTVDAISARAGLTHGSFHKQFASKQALLLEAICAAVDQRRAAVQKTVEE
MAB_1136|M.abscessus_ATCC_1997 SVTLTGLANRAGVHHSAVRRYFSSHKEVLLRLSTEGMAALAESVCAALEG
:. : :* : :. : :
MMAR_0470|M.marinum_M AADKGAR--ALLREFVRLWEHLLTDGGFAAGCPVVAAALGPADDEVELAA
MUL_1119|M.ulcerans_Agy99 AADKGAR--ALLREFVRLWEHLLTDGGFAAGCPVVAAALGPADDEVELAA
TH_3160|M.thermoresistible__bu VLDEAADLPTALRELVGVWRDGLEAGDYAVGCPIVAAALG---TERAARD
Mflv_4384|M.gilvum_PYR-GCK SLEADVR--EMTRRTLAVLSTPAALAALPG--LVGEMASDPTLHTALLER
Mvan_1961|M.vanbaalenii_PYR-1 SLHGDVR--EMLRRTLAVLSTPAARAALPG--LVGEMASDPTLHAALLER
Mb3885|M.bovis_AF2122/97 PADTDRE--NMWRTGINVFFETFG-SHKAVTRAGQAARATSVEVAELWST
Rv3855|M.tuberculosis_H37Rv PADTDRE--NMWRTGINVFFETFG-SHKAVTRAGQAARATSVEVAELWST
MLBr_00064|M.leprae_Br4923 -RDNKRG--NKWRTGINVFFETFG-SHKAVTCAGQVTRDN-TEVRKLWST
MAV_5267|M.avium_104 SGDLAADLVGWVGKLVTSLTTPRG----------SAMLRTLTVACMEHED
MSMEG_2898|M.smegmatis_MC2_155 HGSDAPD---VLKDWY--LSEEHRDNPATGCAVAALVGHAATVTDDALRD
MAB_1136|M.abscessus_ATCC_1997 SQERSPI--EVGAILSGALVDAPLFCDLLGSHYVHFEHEVVIDHVREAQR
MMAR_0470|M.marinum_M EAGTILDSWCAALGRAFVADGFDESTAASLAVTSIAALEGAIMLCRST--
MUL_1119|M.ulcerans_Agy99 EAGTILDSWCAALGRAFVADGFDESTAASLAVTSIAALEGAIMLCRST--
TH_3160|M.thermoresistible__bu VAGVAFADLTGLISDKLVSDGMARRRANSVAVLILTAMEGALVLAQAR--
Mflv_4384|M.gilvum_PYR-GCK FGDILVRGLTEFLESAVRRG---DVRPDVTASDLAEAVAGMTLLALLT--
Mvan_1961|M.vanbaalenii_PYR-1 FADVLVRDLNNYLDSAVRRG---EVRRGVTAVELAEAVTGMTLLALIT--
Mb3885|M.bovis_AF2122/97 FMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGE
Rv3855|M.tuberculosis_H37Rv FMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGE
MLBr_00064|M.leprae_Br4923 FMQKWISYTAAVIDAERKRGVAPDTLPATELATALNLMNERALFASFTAE
MAV_5267|M.avium_104 TAVKLRAGFSAPLHDSVRARLLAEGVDAATAESAADAIVGGVVYPILS--
MSMEG_2898|M.smegmatis_MC2_155 AYCRAVGDLLAMIEDG----------GTADAFGEVALMVGALELARAT--
MAB_1136|M.abscessus_ATCC_1997 VNQAAAMTIVEAIERSAPQIDREGALDIVISSFALAAMLWQFAHPPKGLE
: :
MMAR_0470|M.marinum_M RSAEPL--------RQVGEQLEFLVKARGFVAQSRLDSE
MUL_1119|M.ulcerans_Agy99 RSVEPL--------RQVGEQLEFLVKARGFVAQSRLDSE
TH_3160|M.thermoresistible__bu RDPAAL--------DAVVDELTLLCSGS---AD------
Mflv_4384|M.gilvum_PYR-GCK RGTAVD--------EVWLDRTARLITKG--ISA------
Mvan_1961|M.vanbaalenii_PYR-1 RGANVD--------DAWIERTAHLITKG--ISS------
Mb3885|M.bovis_AF2122/97 QPSVPE--------ARVLDTLVHIWVTSIYGENR-----
Rv3855|M.tuberculosis_H37Rv QPSVPE--------ARVLDTLVHIWVTSIYGENR-----
MLBr_00064|M.leprae_Br4923 QPHVPE--------SRVLDTLVHIWVSSIYNEIR-----
MAV_5267|M.avium_104 GAQRYS--------RRRAEHTTRLIVAALTAG-------
MSMEG_2898|M.smegmatis_MC2_155 KGTPLS--------ARFLESARQRLSRQE----------
MAB_1136|M.abscessus_ATCC_1997 HDFSNEPGIPDDWDTDFGSTLTRLLTATCIGAAK-----
.