For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_5182 (-)

annotation: 2-nitropropane dioxygenase
coordinates: 5281804 - 5282817
length: 337

ALTTKFTEAFGVTHPIAQGGMQWVGRAELVAAVANAGALGFITALTQPTPADLANEIARCRDLTDKPFGV
NLTILPSINPPPYDEYRQVIVDSGVKIVETAGSNPAPHLPMFHDNGIKVLHKCTSVRHAVKAQSLGVDGI
SIDGFECAGHPGEDDIPGLVLIPAAADKIEIPMIASGGFADGRGLAAALALGADGINMGSRFMCTVESSI
HQNVKEAIVAGDERGTELIFRTLHNTARVASNKVSREVVEILNKGGQFEDVKDLVAGVRGRKVFENGDVD
AGIWTVGTAMGLIDDIPTVQDLVTRIVRDAEVLISGRLLNMISADEPDAEKETVPA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_5182--100% (337)2-nitropropane dioxygenase
M. smegmatis MC2 155MSMEG_6004-5e-3830.97% (352) oxidoreductase, 2-nitropropane dioxygenase family protein
M. smegmatis MC2 155MSMEG_1660-1e-2129.87% (231) oxidoreductase, 2-nitropropane dioxygenase family protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3583-7e-3830.29% (350) oxidoreductase
M. gilvum PYR-GCKMflv_2128-1e-17291.36% (324) 2-nitropropane dioxygenase, NPD
M. tuberculosis H37RvRv3553-7e-3830.29% (350) oxidoreductase
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_4001c-2e-4334.85% (307) putative 2-nitropropane dioxygenase, NPD
M. marinum MMMAR_5042-1e-3730.57% (350) 2-nitropropane dioxygenase
M. avium 104MAV_2769-6e-3931.05% (306) oxidoreductase, 2-nitropropane dioxygenase family protein
M. thermoresistible (build 8)TH_3625-1e-16085.14% (323) PUTATIVE 2-Nitropropane dioxygenase
M. ulcerans Agy99MUL_4116-6e-3730.29% (350) 2-nitropropane dioxygenase
M. vanbaalenii PYR-1Mvan_4576-1e-16889.51% (324) 2-nitropropane dioxygenase, NPD

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2128|M.gilvum_PYR-GCK          MTITTKFTETFGVEHPIAQGGMQWVGRAELVAAVANAGALGFITALTQPT
Mvan_4576|M.vanbaalenii_PYR-1       MTIRTKFTETFGVEHPIAQGGMQWVGRAELVAAVANAGALGFITALTQPT
MSMEG_5182|M.smegmatis_MC2_155      MALTTKFTEAFGVTHPIAQGGMQWVGRAELVAAVANAGALGFITALTQPT
TH_3625|M.thermoresistible__bu      MPLTTKFTEAFGIEHPIAQGGMQWVGRAELVAAVANAGALGFITALTQPT
MAB_4001c|M.abscessus_ATCC_199      -MITNRVTELLGVERPIVQAPMGWIARSQLASAVCNAGGLGIIETSSGEL
MAV_2769|M.avium_104                ---------------------MTYIAGAQLAAAVSNAGALGIIETTS---
Mb3583|M.bovis_AF2122/97            MRLRTPLTELIGIEHPVVQTGMGWVAGARLVSATANAGGLGILASAT-MT
Rv3553|M.tuberculosis_H37Rv         MRLRTPLTELIGIEHPVVQTGMGWVAGARLVSATANAGGLGILASAT-MT
MMAR_5042|M.marinum_M               MRLRTPLTDLVGVEHPVVQTGMGWVAGARLVSATANAGGLGILASAT-MT
MUL_4116|M.ulcerans_Agy99           MRLRTPLTDLVGVEHPVVQTGMGWVAGARLVSATANAGGLGILASAT-MT
                                                         * ::. :.*.:*..***.**:: : :   

Mflv_2128|M.gilvum_PYR-GCK          PADLANEIARTRDLTDKPFGVNLTILPAINPPPYDEYRQVIVDAGIKIVE
Mvan_4576|M.vanbaalenii_PYR-1       PADLANEIAKTRDLTDKPFGVNLTILPAINPPPYDEYRQVIVDAGIKIVE
MSMEG_5182|M.smegmatis_MC2_155      PADLANEIARCRDLTDKPFGVNLTILPSINPPPYDEYRQVIVDSGVKIVE
TH_3625|M.thermoresistible__bu      PKDLANEIARCRDLTDKPFGVNLTILPTISPPPYDEYRRVIIDSGVKVVE
MAB_4001c|M.abscessus_ATCC_199      -DAIKDEIRAMREFTDKPFGVNIAQAFVRDPS----IAQFVVDQGVTFVT
MAV_2769|M.avium_104                -DQGRADLRRVRELTAGAVGANIALLFNRDPA----MLDLLVANDIRFVT
Mb3583|M.bovis_AF2122/97            LDELAAAITKVKAVTDKPFGVNIRADAADAGDR----VELMIREGVRVAS
Rv3553|M.tuberculosis_H37Rv         LDELAAAITKVKAVTDKPFGVNIRADAADAGDR----VELMIREGVRVAS
MMAR_5042|M.marinum_M               LDELATAIGKVKATTDKPFGVNIRADAADASDR----VELMIREGVKVAS
MUL_4116|M.ulcerans_Agy99           LDELATAIGKVKATTDKPFGVNIRADAADASDR----VELMIREGVKVAS
                                           :   :  *  ..*.*:                .::  .: .. 

Mflv_2128|M.gilvum_PYR-GCK          TAGSNPAPHLPMFHDNGIKVLHKCTSVRHAVKAQSLGVDGISIDGFECAG
Mvan_4576|M.vanbaalenii_PYR-1       TAGSNPAPHLPMFHDNGIKVLHKCTSVRHAVKAQSLGVDGISIDGFECAG
MSMEG_5182|M.smegmatis_MC2_155      TAGSNPAPHLPMFHDNGIKVLHKCTSVRHAVKAQSLGVDGISIDGFECAG
TH_3625|M.thermoresistible__bu      TAGSNPAPHLSHFHDNGIKVLHKCTSVRHAVKAQELGVDGISIDGFECAG
MAB_4001c|M.abscessus_ATCC_199      TSAGDPNKYTRVLKDNGLTVFHVVPTLAAALKAVDAGVDGLVVEGVEGGG
MAV_2769|M.avium_104                TSAGDPALFTDRLHDAGITVFHVVGTLAAAKKAVDAGVDGLVVEGVEGGG
Mb3583|M.bovis_AF2122/97            FALAPKQQLIARLKEAGAVVIPSIGAAKHARKVAAWGADAMIVQGGEGGG
Rv3553|M.tuberculosis_H37Rv         FALAPKQQLIARLKEAGAVVIPSIGAAKHARKVAAWGADAMIVQGGEGGG
MMAR_5042|M.marinum_M               FALAPKPELIARLKEAGAVVIPSIGAAKHARKVAGWGADAMIVQGGEGGG
MUL_4116|M.ulcerans_Agy99           FALAPKPELIARLKEAGAVVIPSIGAAKHARKVAGWGADAMIVQGGEGGG
                                     : .        ::: *  *:    :   * *.   *.*.: ::* * .*

Mflv_2128|M.gilvum_PYR-GCK          HPGEDDVPGLVLIPAAADKIE---IPMIASGGFADGRGLAAALALGADGV
Mvan_4576|M.vanbaalenii_PYR-1       HPGEDDVPGLVLIPAAADKIE---IPMIASGGFADARGLVAALALGADGI
MSMEG_5182|M.smegmatis_MC2_155      HPGEDDIPGLVLIPAAADKIE---IPMIASGGFADGRGLAAALALGADGI
TH_3625|M.thermoresistible__bu      HPGEDDIPGLVLIPAAAKQIE---IPMIASGGFADARGLVAALALGADGI
MAB_4001c|M.abscessus_ATCC_199      FKDPKGASTMVLLPLVRSHVD---IPIIAAGGICDGVSMAAAFALGAEGV
MAV_2769|M.avium_104                FKNRFGASTMVLLPLVAAHVD---VPIVAAGGICDARSMAAAFVLGAEAV
Mb3583|M.bovis_AF2122/97            HTGP--VATTLLLPSVLDAVAGTGIPVIAAGGFFDGRGLAAALCYGAAGV
Rv3553|M.tuberculosis_H37Rv         HTGP--VATTLLLPSVLDAVAGTGIPVIAAGGFFDGRGLAAALCYGAAGV
MMAR_5042|M.marinum_M               HTGP--VATTLLLPSVLDAVKGTGIPVIAAGGFFDGRGLAAALSYGAAGV
MUL_4116|M.ulcerans_Agy99           HTGP--VATTLLLPSVLDAVKGTGIPVIAAGGFFDGHGLAAALSYGAAGV
                                    . .    .  :*:* .   :    :*::*:**: *. .:.**:  ** .:

Mflv_2128|M.gilvum_PYR-GCK          NMGSRFMCTVESCIHQNVKEAIVAGDERGTELIFRSLHNTARVASNVVSR
Mvan_4576|M.vanbaalenii_PYR-1       NMGSRFMCTVESCIHQNVKEAIVAGDERGTELIFRSLHNTARVASNEVSR
MSMEG_5182|M.smegmatis_MC2_155      NMGSRFMCTVESSIHQNVKEAIVAGDERGTELIFRTLHNTARVASNKVSR
TH_3625|M.thermoresistible__bu      NMGSRFMCTVESPVHQKVKEAIVAGDERGTELIFRTLGNTGRVASNSVSR
MAB_4001c|M.abscessus_ATCC_199      QMGTRMMSAAESPIHHNWKAAVVAARETDTVLLNRLTKPGLRALRSARTE
MAV_2769|M.avium_104                QMGTRLLASADSPVHVNLKQAVVAADETATVLLPLDGKRMMRVIRTPAAE
Mb3583|M.bovis_AF2122/97            AMGTRFLLTSDSTVPDAVKRRYLQAGLDGTVVTTRVDGMPHRVLRTELVE
Rv3553|M.tuberculosis_H37Rv         AMGTRFLLTSDSTVPDAVKRRYLQAGLDGTVVTTRVDGMPHRVLRTELVE
MMAR_5042|M.marinum_M               AMGTRFLLTSDSTVPEAVKRRYLQAALDGTVVTTRVDGMPHRVLRTGLVE
MUL_4116|M.ulcerans_Agy99           AMGTRFLLTSDSTVPDAVKRRYLQAALDGTVVTTRVDGMPHRVLRTGLVE
                                     **:*:: : :* :    *   : .    * :         *.  .   .

Mflv_2128|M.gilvum_PYR-GCK          EVVQILKEGGQFEDVKDLVAGVRGRKVFD---------------------
Mvan_4576|M.vanbaalenii_PYR-1       EVVQILKDGGQFEDVKDLVAGVRGRKVFD---------------------
MSMEG_5182|M.smegmatis_MC2_155      EVVEILNKGGQFEDVKDLVAGVRGRKVFE---------------------
TH_3625|M.thermoresistible__bu      EVVRILADGGRFEDVRDLVSGARGARVYE---------------------
MAB_4001c|M.abscessus_ATCC_199      EMERRDLVS------LLETGDP--LDLYF---------------------
MAV_2769|M.avium_104                RLEAAGAAG------EGAAALQRVQRLYF---------------------
Mb3583|M.bovis_AF2122/97            KLESGSRARGFAAALRNAGKFRRMSQMTWRSMIRDGLTMRHGKELTWSQV
Rv3553|M.tuberculosis_H37Rv         KLESGSRARGFAAALRNAGKFRRMSQMTWRSMIRDGLTMRHGKELTWSQV
MMAR_5042|M.marinum_M               KLEGGSRARGFTAAIRNAAKFKQMSQMSWASMIKDGLAMRHGKELTWSQV
MUL_4116|M.ulcerans_Agy99           KLEGGSRARGFTAAIRNAAKFKQMSQMSWASMIKDGLAMRHGKELTWSQV
                                    .:                        :                       

Mflv_2128|M.gilvum_PYR-GCK          ---------------DGDIDAGIWTVGTAMGLINDIPTVGDLVSRIVGDA
Mvan_4576|M.vanbaalenii_PYR-1       ---------------DGDIDAGIWTVGTAMGLINDIPTVGELVSRIVGEA
MSMEG_5182|M.smegmatis_MC2_155      ---------------NGDVDAGIWTVGTAMGLIDDIPTVQDLVTRIVRDA
TH_3625|M.thermoresistible__bu      ---------------TGDLEAGIWWIGTSMGLIDDIPTVGTLLSRIIRDA
MAB_4001c|M.abscessus_ATCC_199      ---------------GGNMETFVPLGGQVAGRIGGVESVKDILDATMDEF
MAV_2769|M.avium_104                ---------------EGDLDASVANTGQVAGRIRDLPPAADIIKQMWKGC
Mb3583|M.bovis_AF2122/97            LMAANTPMLLKAGLVDGNTEAGVLASGQVAGILDDLPSCKELIESIVLDA
Rv3553|M.tuberculosis_H37Rv         LMAANTPMLLKAGLVDGNTEAGVLASGQVAGILDDLPSCKELIESIVLDA
MMAR_5042|M.marinum_M               VMAANTPMLLKAGLVDGNPEAGVLASGQVAGILDDLPSCAQLVESIVHDA
MUL_4116|M.ulcerans_Agy99           LMAANTPMLLKAGLVDGNPEAGVLASGQVAGILDDLPSCAQLVESIVHDA
                                                    *: :: :   *   * : .: .   ::       

Mflv_2128|M.gilvum_PYR-GCK          EEIISGRLAGMVS---PVAQRV----
Mvan_4576|M.vanbaalenii_PYR-1       EQLITGRLGEMVT---PTAARV----
MSMEG_5182|M.smegmatis_MC2_155      EVLISGRLLNMISADEPDAEKETVPA
TH_3625|M.thermoresistible__bu      EHLIEGRLQAMVR--SPAGADQ----
MAB_4001c|M.abscessus_ATCC_199      TAVIGKLAAQYV--------------
MAV_2769|M.avium_104                REVLAATSARLDWADDA---------
Mb3583|M.bovis_AF2122/97            ITHLQTASALVE--------------
Rv3553|M.tuberculosis_H37Rv         ITHLQTASALVE--------------
MMAR_5042|M.marinum_M               IEHLRAAAALVE--------------
MUL_4116|M.ulcerans_Agy99           IEHLRAAAALVE--------------
                                       :