For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3625 | - | - | 100% (332) | 2-Nitropropane dioxygenase |
M. thermoresistible (build 8) | TH_3584 | - | e-159 | 84.16% (322) | PUTATIVE 2-nitropropane dioxygenase, NPD |
M. thermoresistible (build 8) | TH_2580 | - | e-157 | 82.66% (323) | PUTATIVE 2-nitropropane dioxygenase, NPD |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3583 | - | 7e-37 | 31.71% (350) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_2128 | - | 1e-157 | 82.66% (323) | 2-nitropropane dioxygenase, NPD |
M. tuberculosis H37Rv | Rv3553 | - | 7e-37 | 31.71% (350) | oxidoreductase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4001c | - | 1e-41 | 32.29% (319) | putative 2-nitropropane dioxygenase, NPD |
M. marinum M | MMAR_5042 | - | 1e-36 | 31.36% (354) | 2-nitropropane dioxygenase |
M. avium 104 | MAV_0607 | - | 1e-37 | 32.00% (350) | oxidoreductase, 2-nitropropane dioxygenase family protein |
M. smegmatis MC2 155 | MSMEG_5182 | - | 1e-159 | 85.14% (323) | 2-nitropropane dioxygenase |
M. ulcerans Agy99 | MUL_4116 | - | 6e-36 | 31.07% (354) | 2-nitropropane dioxygenase |
M. vanbaalenii PYR-1 | Mvan_4576 | - | 1e-158 | 82.57% (327) | 2-nitropropane dioxygenase, NPD |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5042|M.marinum_M --MRLRTPLTDLVGVEHPVVQTGMGWVAGARLVSATANAGGLG-ILASAT MUL_4116|M.ulcerans_Agy99 --MRLRTPLTDLVGVEHPVVQTGMGWVAGARLVSATANAGGLG-ILASAT MAV_0607|M.avium_104 MDMRLRTPLTELVGVEHPVVQTGMGWVAGARLVSATANAGGLG-ILASAT Mb3583|M.bovis_AF2122/97 --MRLRTPLTELIGIEHPVVQTGMGWVAGARLVSATANAGGLG-ILASAT Rv3553|M.tuberculosis_H37Rv --MRLRTPLTELIGIEHPVVQTGMGWVAGARLVSATANAGGLG-ILASAT Mflv_2128|M.gilvum_PYR-GCK --MTITTKFTETFGVEHPIAQGGMQWVGRAELVAAVANAGALGFITALTQ Mvan_4576|M.vanbaalenii_PYR-1 --MTIRTKFTETFGVEHPIAQGGMQWVGRAELVAAVANAGALGFITALTQ MSMEG_5182|M.smegmatis_MC2_155 --MALTTKFTEAFGVTHPIAQGGMQWVGRAELVAAVANAGALGFITALTQ TH_3625|M.thermoresistible__bu --MPLTTKFTEAFGIEHPIAQGGMQWVGRAELVAAVANAGALGFITALTQ MAB_4001c|M.abscessus_ATCC_199 ---MITNRVTELLGVERPIVQAPMGWIARSQLASAVCNAGGLGIIETSSG : . .*: .*: :*:.* * *:. :.*.:*..***.** * : : MMAR_5042|M.marinum_M MTLDELATAIGKVKATTDKPFGVNIRADAADASDR----VELMIREGVKV MUL_4116|M.ulcerans_Agy99 MTLDELATAIGKVKATTDKPFGVNIRADAADASDR----VELMIREGVKV MAV_0607|M.avium_104 MTLDELATAIAKVKAATDKPFGVNIRADAADAADR----VDLMIREGVKV Mb3583|M.bovis_AF2122/97 MTLDELAAAITKVKAVTDKPFGVNIRADAADAGDR----VELMIREGVRV Rv3553|M.tuberculosis_H37Rv MTLDELAAAITKVKAVTDKPFGVNIRADAADAGDR----VELMIREGVRV Mflv_2128|M.gilvum_PYR-GCK PTPADLANEIARTRDLTDKPFGVNLTILPAINPPPYDEYRQVIVDAGIKI Mvan_4576|M.vanbaalenii_PYR-1 PTPADLANEIAKTRDLTDKPFGVNLTILPAINPPPYDEYRQVIVDAGIKI MSMEG_5182|M.smegmatis_MC2_155 PTPADLANEIARCRDLTDKPFGVNLTILPSINPPPYDEYRQVIVDSGVKI TH_3625|M.thermoresistible__bu PTPKDLANEIARCRDLTDKPFGVNLTILPTISPPPYDEYRRVIIDSGVKV MAB_4001c|M.abscessus_ATCC_199 -ELDAIKDEIRAMREFTDKPFGVNIAQAFVRDPS----IAQFVVDQGVTF : * : ********: .:: *: . MMAR_5042|M.marinum_M ASFALAPKPELIARLKEAGAVVIPSIGAAKHARKVAGWGADAMIVQGGEG MUL_4116|M.ulcerans_Agy99 ASFALAPKPELIARLKEAGAVVIPSIGAAKHARKVAGWGADAMIVQGGEG MAV_0607|M.avium_104 ASFALAPKQELIARLKEAGAVVIPSIGAAKHARKVAGWGADAMIVQGGEG Mb3583|M.bovis_AF2122/97 ASFALAPKQQLIARLKEAGAVVIPSIGAAKHARKVAAWGADAMIVQGGEG Rv3553|M.tuberculosis_H37Rv ASFALAPKQQLIARLKEAGAVVIPSIGAAKHARKVAAWGADAMIVQGGEG Mflv_2128|M.gilvum_PYR-GCK VETAGSNPAPHLPMFHDNGIKVLHKCTSVRHAVKAQSLGVDGISIDGFEC Mvan_4576|M.vanbaalenii_PYR-1 VETAGSNPAPHLPMFHDNGIKVLHKCTSVRHAVKAQSLGVDGISIDGFEC MSMEG_5182|M.smegmatis_MC2_155 VETAGSNPAPHLPMFHDNGIKVLHKCTSVRHAVKAQSLGVDGISIDGFEC TH_3625|M.thermoresistible__bu VETAGSNPAPHLSHFHDNGIKVLHKCTSVRHAVKAQELGVDGISIDGFEC MAB_4001c|M.abscessus_ATCC_199 VTTSAGDPNKYTRVLKDNGLTVFHVVPTLAAALKAVDAGVDGLVVEGVEG . : . ::: * *: : * *. *.*.: ::* * MMAR_5042|M.marinum_M GGHTGP--VATTLLLPSVLDAVKGTGIPVIAAGGFFDGRGLAAALSYGAA MUL_4116|M.ulcerans_Agy99 GGHTGP--VATTLLLPSVLDAVKGTGIPVIAAGGFFDGHGLAAALSYGAA MAV_0607|M.avium_104 GGHTGP--VATTLLLPSVLDAVRGTGIPVIAAGGFFDGRGLAAALSYGAA Mb3583|M.bovis_AF2122/97 GGHTGP--VATTLLLPSVLDAVAGTGIPVIAAGGFFDGRGLAAALCYGAA Rv3553|M.tuberculosis_H37Rv GGHTGP--VATTLLLPSVLDAVAGTGIPVIAAGGFFDGRGLAAALCYGAA Mflv_2128|M.gilvum_PYR-GCK AGHPGEDDVPGLVLIPAAADKIE---IPMIASGGFADGRGLAAALALGAD Mvan_4576|M.vanbaalenii_PYR-1 AGHPGEDDVPGLVLIPAAADKIE---IPMIASGGFADARGLVAALALGAD MSMEG_5182|M.smegmatis_MC2_155 AGHPGEDDIPGLVLIPAAADKIE---IPMIASGGFADGRGLAAALALGAD TH_3625|M.thermoresistible__bu AGHPGEDDIPGLVLIPAAAKQIE---IPMIASGGFADARGLVAALALGAD MAB_4001c|M.abscessus_ATCC_199 GGFKDPKGASTMVLLPLVRSHVD---IPIIAAGGICDGVSMAAAFALGAE .*. . . :*:* . . : **:**:**: *. .:.**:. ** MMAR_5042|M.marinum_M GVAMGTRFLLTSDSTVPEAVKRRYLQAALDGTVVTTRVDGMPHRVLRTGL MUL_4116|M.ulcerans_Agy99 GVAMGTRFLLTSDSTVPDAVKRRYLQAALDGTVVTTRVDGMPHRVLRTGL MAV_0607|M.avium_104 GVAMGTRFLLTSDSTVPDAVKKRYLEAALDGTVVTTRVDGMPHRVLRTGL Mb3583|M.bovis_AF2122/97 GVAMGTRFLLTSDSTVPDAVKRRYLQAGLDGTVVTTRVDGMPHRVLRTEL Rv3553|M.tuberculosis_H37Rv GVAMGTRFLLTSDSTVPDAVKRRYLQAGLDGTVVTTRVDGMPHRVLRTEL Mflv_2128|M.gilvum_PYR-GCK GVNMGSRFMCTVESCIHQNVKEAIVAGDERGTELIFRSLHNTARVASNVV Mvan_4576|M.vanbaalenii_PYR-1 GINMGSRFMCTVESCIHQNVKEAIVAGDERGTELIFRSLHNTARVASNEV MSMEG_5182|M.smegmatis_MC2_155 GINMGSRFMCTVESSIHQNVKEAIVAGDERGTELIFRTLHNTARVASNKV TH_3625|M.thermoresistible__bu GINMGSRFMCTVESPVHQKVKEAIVAGDERGTELIFRTLGNTGRVASNSV MAB_4001c|M.abscessus_ATCC_199 GVQMGTRMMSAAESPIHHNWKAAVVAARETDTVLLNRLTKPGLRALRSAR *: **:*:: : :* : . * : . .* : * *. . MMAR_5042|M.marinum_M VEKLEGGSRARGFTAAIRNAAKFKQMSQMSWASMIKDGLAMRHGKELTWS MUL_4116|M.ulcerans_Agy99 VEKLEGGSRARGFTAAIRNAAKFKQMSQMSWASMIKDGLAMRHGKELTWS MAV_0607|M.avium_104 VEKLESGSPVRGLTAAVRNAAKFKHMSKMTWRSMISDGLAMRHGKEMTWS Mb3583|M.bovis_AF2122/97 VEKLESGSRARGFAAALRNAGKFRRMSQMTWRSMIRDGLTMRHGKELTWS Rv3553|M.tuberculosis_H37Rv VEKLESGSRARGFAAALRNAGKFRRMSQMTWRSMIRDGLTMRHGKELTWS Mflv_2128|M.gilvum_PYR-GCK SREVVQILKEGGQFEDVKDLVAGVRGRKVFDD------------------ Mvan_4576|M.vanbaalenii_PYR-1 SREVVQILKDGGQFEDVKDLVAGVRGRKVFDD------------------ MSMEG_5182|M.smegmatis_MC2_155 SREVVEILNKGGQFEDVKDLVAGVRGRKVFEN------------------ TH_3625|M.thermoresistible__bu SREVVRILADGGRFEDVRDLVSGARGARVYET------------------ MAB_4001c|M.abscessus_ATCC_199 TEEMER--------RDLVSLLETGDPLDLYFG------------------ .:: : . : MMAR_5042|M.marinum_M QVVMAANTPMLLKAGLVDGNPEAGVLASGQVAGILDDLPSCAQLVESIVH MUL_4116|M.ulcerans_Agy99 QVLMAANTPMLLKAGLVDGNPEAGVLASGQVAGILDDLPSCAQLVESIVH MAV_0607|M.avium_104 QVVMAANTPMLLKAGLVEGNTEAGVLASGQVAGILEDLPSCAELIDSIVR Mb3583|M.bovis_AF2122/97 QVLMAANTPMLLKAGLVDGNTEAGVLASGQVAGILDDLPSCKELIESIVL Rv3553|M.tuberculosis_H37Rv QVLMAANTPMLLKAGLVDGNTEAGVLASGQVAGILDDLPSCKELIESIVL Mflv_2128|M.gilvum_PYR-GCK ------------------GDIDAGIWTVGTAMGLINDIPTVGDLVSRIVG Mvan_4576|M.vanbaalenii_PYR-1 ------------------GDIDAGIWTVGTAMGLINDIPTVGELVSRIVG MSMEG_5182|M.smegmatis_MC2_155 ------------------GDVDAGIWTVGTAMGLIDDIPTVQDLVTRIVR TH_3625|M.thermoresistible__bu ------------------GDLEAGIWWIGTSMGLIDDIPTVGTLLSRIIR MAB_4001c|M.abscessus_ATCC_199 ------------------GNMETFVPLGGQVAGRIGGVESVKDILDATMD *: :: : * * : .: : :: : MMAR_5042|M.marinum_M DAIEHLRAAAALVE-------------- MUL_4116|M.ulcerans_Agy99 DAIEHLRAAAALVE-------------- MAV_0607|M.avium_104 DAIAHLRSASGLIEE------------- Mb3583|M.bovis_AF2122/97 DAITHLQTASALVE-------------- Rv3553|M.tuberculosis_H37Rv DAITHLQTASALVE-------------- Mflv_2128|M.gilvum_PYR-GCK DAEEIISGRLAGMVS---PVAQRV---- Mvan_4576|M.vanbaalenii_PYR-1 EAEQLITGRLGEMVT---PTAARV---- MSMEG_5182|M.smegmatis_MC2_155 DAEVLISGRLLNMISADEPDAEKETVPA TH_3625|M.thermoresistible__bu DAEHLIEGRLQAMVR--SPAGADQ---- MAB_4001c|M.abscessus_ATCC_199 EFTAVIGKLAAQYV-------------- : :