For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTNPDGPAGGTPPSGSGEPPAYQPGYPPAQPDPFAPVDYPYSPPPAAFPPPYPPPQPGFSYAPFDPYGRP PGTNGLAIASLVCSLAGMLCCLPGLAGLVLGILGMRETRRTGQDGYGIAVAGTVIGAFVTVGIALYFVLL LIGAAVAPN
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5063 | - | - | 100% (149) | integral membrane protein |
| M. smegmatis MC2 155 | MSMEG_3229 | - | 4e-13 | 31.13% (151) | hypothetical protein MSMEG_3229 |
| M. smegmatis MC2 155 | MSMEG_5268 | - | 3e-10 | 41.00% (100) | hypothetical protein MSMEG_5268 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1265c | - | 3e-24 | 37.89% (161) | hypothetical protein Mb1265c |
| M. gilvum PYR-GCK | Mflv_2210 | - | 5e-15 | 29.35% (201) | hypothetical protein Mflv_2210 |
| M. tuberculosis H37Rv | Rv1233c | - | 5e-24 | 37.74% (159) | hypothetical protein Rv1233c |
| M. leprae Br4923 | MLBr_02395 | Ag36 | 8e-08 | 38.54% (96) | proline rich antigenic protein |
| M. abscessus ATCC 19977 | MAB_1370c | - | 1e-20 | 35.20% (179) | hypothetical protein MAB_1370c |
| M. marinum M | MMAR_4208 | - | 2e-23 | 37.06% (170) | proline and glycine rich transmembrane protein |
| M. avium 104 | MAV_1372 | - | 8e-26 | 42.11% (152) | hypothetical protein MAV_1372 |
| M. thermoresistible (build 8) | TH_3105 | - | 8e-19 | 35.03% (177) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_4272 | - | 8e-09 | 45.71% (70) | hypothetical protein MUL_4272 |
| M. vanbaalenii PYR-1 | Mvan_4486 | - | 2e-25 | 38.15% (173) | hypothetical protein Mvan_4486 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5063|M.smegmatis_MC2_155 ---MTNP---DG--PAGGTP-------------PSGSGEPPAYQ------
TH_3105|M.thermoresistible__bu ---MTNPGNADGTPPAEGQPGPSETGADDLAREPTGGADPTASEHTPDQP
Mb1265c|M.bovis_AF2122/97 ---MTAPSGSSG--ESAHDAAGG-------PPPVGERPPEQPIA---DAP
Rv1233c|M.tuberculosis_H37Rv ---MTAPSGSSG--ESAHDAAGG-------PPPVGERPPEQPIA---DAP
MMAR_4208|M.marinum_M ---MTAPGGSFD--EGAHDGAAS-------PPP-GEQPSEQPFSPPPDAP
MAV_1372|M.avium_104 MNTMTAPGAGFG--ESAQHDHHG-------DQAHGDKPNDDATS----AP
Mflv_2210|M.gilvum_PYR-GCK ---MTSSDNDADRVESSESAADG-------SEPTPAGYEAPSIEHTPSAP
Mvan_4486|M.vanbaalenii_PYR-1 ---MTSSDNDAGRGESSDSTASG-------SEPSSAGYEPPPIEQTQSAP
MAB_1370c|M.abscessus_ATCC_199 ---MTTPGHEPS--GSSPDASSG------YEYPSLEKSAPPADPAVAANP
MUL_4272|M.ulcerans_Agy99 MSTLPPPGYPVEPNSGAPGYEAAGYPPSGYADPPPAYGPPPAYGPPPGYG
MLBr_02395|M.leprae_Br4923 ---MTDQPPPSGSNPTPAPPPPG----------SSGGYEPSFAPSELGSA
:.
MSMEG_5063|M.smegmatis_MC2_155 ------------------------------PGYPPAQPDP----FAP---
TH_3105|M.thermoresistible__bu TAADQAADQAGDRPDEQAFDGSWAAAGETAPAYGESPPAG----FAP---
Mb1265c|M.bovis_AF2122/97 WAPP-ASSPMADHP---------------PPAY-PPSG------YPP---
Rv1233c|M.tuberculosis_H37Rv WAPP-ASSPMANHP---------------PPAY-PPSG------YPP---
MMAR_4208|M.marinum_M WAAPEAASPADDYP---------------APSY-PPPA------YPPEPV
MAV_1372|M.avium_104 HAQPAPWEPPAGSV---------------PPPY-PPPG------YPA---
Mflv_2210|M.gilvum_PYR-GCK DTSSDDTPPHGYTP---------------PPAYNPPPSSTPPM-YGTPPN
Mvan_4486|M.vanbaalenii_PYR-1 PPAQDYLPPPAYDA---------------PPAYPPSPG------YEQQP-
MAB_1370c|M.abscessus_ATCC_199 TPSPPPAWEAPGQP---------------TASYPAYPAS-----------
MUL_4272|M.ulcerans_Agy99 APPPGYGPPPGYAP--------------PPPGYGPPPGYGPPPGYGPPPP
MLBr_02395|M.leprae_Br4923 YPPPTAPPVGGSYP------------------PPPPPGG-----------
MSMEG_5063|M.smegmatis_MC2_155 --VDYP-------------YSPPP-----AAFPPP--YPP--PQPGFSY-
TH_3105|M.thermoresistible__bu --LDYPGAGAGTEPYQPSGYPAPPPG---AQYPPP--YPPGPQQPGYGYP
Mb1265c|M.bovis_AF2122/97 ---AYQPG-------YPTDYPPPMP---PGGYAPPGYPPPGTSSAGYGD-
Rv1233c|M.tuberculosis_H37Rv ---AYQPG-------YPTGYPPPMP---PGGYAPPGYPPPGTSSAGYGD-
MMAR_4208|M.marinum_M GPGGYPPD-------YATGYPP--P---PG-YPPPGYPPYGAAAGEYGG-
MAV_1372|M.avium_104 ---DYPPG-------YPPPYPPPAPS--PVPPPPPGYGPP--PPPGYGP-
Mflv_2210|M.gilvum_PYR-GCK --TGYPAPGD----FTSPPYPPPPAGYGAQNYPPPGYGAQGYGAQGYGP-
Mvan_4486|M.vanbaalenii_PYR-1 ---GYPPSGG----FAAPDYPPPPAGYPPP-YPDAGPPPP---HPGYGA-
MAB_1370c|M.abscessus_ATCC_199 ---AYPTAPP-----AYPTAPPPYPTASQAAYPQYGQSYPSYQPGQPGT-
MUL_4272|M.ulcerans_Agy99 ---GYGPPLVPG--AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLT
MLBr_02395|M.leprae_Br4923 ---SYPPPPP-----PGGSYPPPPPSTGAYAPPPPGPAIRSLPKEAYTFW
* .
MSMEG_5063|M.smegmatis_MC2_155 ------------APFDP---------------------------------
TH_3105|M.thermoresistible__bu APPPYDAPRYPTPPYDPAQPPQFGAGQFGAAGYPDPNQPG--YPGYYGYP
Mb1265c|M.bovis_AF2122/97 ------------IPY-PPMPPP-------YGGSP---------GGYYPEP
Rv1233c|M.tuberculosis_H37Rv ------------IPY-PPMPPP-------YGGSP---------GGYYPEP
MMAR_4208|M.marinum_M ------------TPY-PPPPPPPAPMAAPYGAPPPNYPPPSYPGGYYPPP
MAV_1372|M.avium_104 ------------PGY-PGGYYP---------GPD--------YGGYPPQP
Mflv_2210|M.gilvum_PYR-GCK ------------QGYGAQSYGAQG-YPSPYGAYP----------GGYPGA
Mvan_4486|M.vanbaalenii_PYR-1 ------------PGYGAPSYPPPPPYGTMPGGYPP--------AGGYPDA
MAB_1370c|M.abscessus_ATCC_199 --------------YPPPGYPVAG----GYPGYPP----------PGYAD
MUL_4272|M.ulcerans_Agy99 ----------AIVVVVMQVITLLAAIGPLEAASRFDTHPSELSWGVVGAW
MLBr_02395|M.leprae_Br4923 VTR--------VLAYVIDNIPATVLLGIGMLIQTLTKQEACVTDITQYNV
MSMEG_5063|M.smegmatis_MC2_155 ------YGRPPGTNGLAIASLVCSLA-------GMLCCLP----GLAGLV
TH_3105|M.thermoresistible__bu QGYSQGYTQPPSTNTLSIWSLVISLISIPLLCSGLLSFLAPP-AAIAGIV
Mb1265c|M.bovis_AF2122/97 GYLDGYGPSQPGMNTMALVSLISALVGV-------LCCIG----SIVGIV
Rv1233c|M.tuberculosis_H37Rv GYLDGYGPSQPGMNTMALVSLISALVGV-------LCCIG----SIVGIV
MMAR_4208|M.marinum_M DPMAGYGPALPGMNTMAIVALVSSLVGV-------FCCIG----SVVAIV
MAV_1372|M.avium_104 PLLGG----QPGTNGLAIASLIASFTGL-------LCGIG----SVVAIV
Mflv_2210|M.gilvum_PYR-GCK DYGYG-TPAQQGSNGMAIGSLVTSLLALPL----NIACFSGTIASIVAVV
Mvan_4486|M.vanbaalenii_PYR-1 GYGYG-APAPQGTNSLAIASLVASCVGL-------FCCIG----SIAGIA
MAB_1370c|M.abscessus_ATCC_199 PYGYGAYGQTGGTNGLAIASLITSIAAIVT------CYLG-IILGIVGVI
MUL_4272|M.ulcerans_Agy99 TGSAAAGLLVSWLGGMLLSGILTVVVGRAVFG--SPITISEAWARVRGRI
MLBr_02395|M.leprae_Br4923 NQYCATQPTGIGMLAFWFAWLMATAYLVWN-----YGYRQGATGSSIGKT
: : :: .
MSMEG_5063|M.smegmatis_MC2_155 LGILGMRETRRTGQDGYGIAVAGTVIGAFVTVGIALYFVLLLIGAAVAPN
TH_3105|M.thermoresistible__bu LGSLGLNQIKNTGENGRALAIGGIVAGAAVLVMVVVIILMIMLAAAAGA-
Mb1265c|M.bovis_AF2122/97 FGAIAINQIKQTREEGYGLAVAGIVIGIATLLVYMIAGIFAIP-------
Rv1233c|M.tuberculosis_H37Rv FGAIAINQIKQTREEGYGLAVAGIVIGIATLLVYMIAGIFAIP-------
MMAR_4208|M.marinum_M VGTIAINQIKQTREDGYGLAVAGIVIAVATLLIYLVVGIFSIPSH-----
MAV_1372|M.avium_104 LGAIALDQIKRTRQDGFGLAVAGIVIGIATLVVTLVVVLFALHTH-----
Mflv_2210|M.gilvum_PYR-GCK LGVVALNQIKTSGQSGKEMAIAGIAIGVLGLIGAFVLMAVVFAGSG----
Mvan_4486|M.vanbaalenii_PYR-1 MGVIALSQIKQTRAEGQGLAVAGIIVGVITLLISGIATVAVMAS------
MAB_1370c|M.abscessus_ATCC_199 LGVVALNQLKTRQQDGKGIAIAGIILGAVIPVLWILVLIVIAAGSSSTSG
MUL_4272|M.ulcerans_Agy99 LALIGLALLEGAGLVALAGLVVVILVGVAAAANGATAALLGFPLVLLVGL
MLBr_02395|M.leprae_Br4923 VMKFKVISEATGQPIGFGMSVVRQLAHFVDAVICCIGFLFPLWDSKRQTL
. . : . :
MSMEG_5063|M.smegmatis_MC2_155 --------------------------------------------------
TH_3105|M.thermoresistible__bu --------------------------------------------------
Mb1265c|M.bovis_AF2122/97 --------------------------------------------------
Rv1233c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_4208|M.marinum_M --------------------------------------------------
MAV_1372|M.avium_104 --------------------------------------------------
Mflv_2210|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4486|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_1370c|M.abscessus_ATCC_199 SF------------------------------------------------
MUL_4272|M.ulcerans_Agy99 LVAYLYTVLMFAPVLIVLERLPLVDAITRSFALVTGGFWRVLGIRLLTAI
MLBr_02395|M.leprae_Br4923 ADKIMTTVCLPI--------------------------------------
MSMEG_5063|M.smegmatis_MC2_155 --------------------------------------------------
TH_3105|M.thermoresistible__bu --------------------------------------------------
Mb1265c|M.bovis_AF2122/97 --------------------------------------------------
Rv1233c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_4208|M.marinum_M --------------------------------------------------
MAV_1372|M.avium_104 --------------------------------------------------
Mflv_2210|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4486|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_1370c|M.abscessus_ATCC_199 --------------------------------------------------
MUL_4272|M.ulcerans_Agy99 VVGLVGGAISAPFGIVGQILLGATASEGSTGMFLVGMTLSSIGSAISQII
MLBr_02395|M.leprae_Br4923 --------------------------------------------------
MSMEG_5063|M.smegmatis_MC2_155 --------------------------------------------------
TH_3105|M.thermoresistible__bu --------------------------------------------------
Mb1265c|M.bovis_AF2122/97 --------------------------------------------------
Rv1233c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_4208|M.marinum_M --------------------------------------------------
MAV_1372|M.avium_104 --------------------------------------------------
Mflv_2210|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4486|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_1370c|M.abscessus_ATCC_199 --------------------------------------------------
MUL_4272|M.ulcerans_Agy99 TAPFTAGVVVLLYTDRRMRAEAFDLVLQTGAAGGPAAVESTDTLWLTRPL
MLBr_02395|M.leprae_Br4923 --------------------------------------------------