For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LSRIEEGAFERELNHTSPVDAFAMIQEARLGALRIPADLGGYGIGLVTFFEFLMRLATVDPNVAHALRAH YVFVDERLFEFRRGQERLWLDHIVAGDLFGNANTELTAKQAAGLEPSRFQARLSADGDEYRLNGTKFYST GSLYCQWVVVSAVNDAGAVVRAIVPTNRDGVRIDDDWDGIGQRLTASGTAVFDNVRVYTHEVFIRQAGHV DGYGSPMAQLYLTAVTAGILEAINRDAVTVLRGRTRTFAHGVGSSAKDDPLLQHVVGQLASDAFAGRAVV LEAARALADAAETVMADGVGDKSLLEAAKMACAKAKVTIENLVSRSGWQLFDVAGASATLRTKNLDRHWR NARTIASHNPVLYKTRALGDYLVNGNPLPRGSAF*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4084 | - | - | 100% (385) | putative acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_4391 | - | 5e-76 | 40.15% (391) | acyl-CoA dehydrogenase-family protein |
M. smegmatis MC2 155 | MSMEG_5001 | - | 1e-75 | 40.15% (391) | pesticide degrading monooxygenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3601c | - | 6e-09 | 24.42% (389) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_5011 | - | 1e-13 | 23.20% (362) | acyl-CoA dehydrogenase domain-containing protein |
M. tuberculosis H37Rv | Rv0752c | fadE9 | 4e-09 | 23.55% (361) | acyl-CoA dehydrogenase FADE9 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 1e-09 | 23.19% (345) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_1422c | - | 8e-85 | 43.30% (388) | putative acyl-CoA dehydrogenase |
M. marinum M | MMAR_4034 | fadE | 6e-11 | 22.35% (349) | acyl-CoA dehydrogenase FadE |
M. avium 104 | MAV_3422 | - | 1e-72 | 41.03% (368) | acyl-CoA dehydrogenase domain-containing protein |
M. thermoresistible (build 8) | TH_3721 | - | 3e-44 | 36.71% (286) | PUTATIVE putative acyl-CoA dehydrogenase family protein |
M. ulcerans Agy99 | MUL_4141 | - | 8e-09 | 24.62% (390) | acyl-CoA dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_3173 | - | 2e-29 | 29.40% (398) | acyl-CoA dehydrogenase type 2 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3601c|M.bovis_AF2122/97 ---------MTSIQQRDAQSVLAAIDDLLPEIRDRAQATEDL--RRLPDE MUL_4141|M.ulcerans_Agy99 ---------MTTIQQRDAQSVLAAIDDLLPQLRERAQATEDL--RRLPDE MSMEG_4084|M.smegmatis_MC2_155 ---------------------------MLSRIEEGAFERELN--HTSPVD MAB_1422c|M.abscessus_ATCC_199 ------MTSAPSVLEIRALPGTDTYRNLLAQVAEGARDRDLD--DENPFD MAV_3422|M.avium_104 --------MPVAFHRQDTPAGAAAVQPVLAEIAADYRLRLADGGTEPPLR TH_3721|M.thermoresistible__bu ---------VPYFDEQRFEALAAEFRPVFDRIRAGAVQRERD--RELPFE Mflv_5011|M.gilvum_PYR-GCK ---------MDYFGLDDDDRVIAETAAAFAEKRLAPHALEWDETHHFPVD Rv0752c|M.tuberculosis_H37Rv -----------MFVLNDDERVIVETAAAFAGKRLAPHALEWDAAKHFPVD MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFPEE MMAR_4034|M.marinum_M --------MTAPQVSDEDFAQILAQTRHFVRSVVLPREQQILDEDRVPED Mvan_3173|M.vanbaalenii_PYR-1 -MATDITDRIPDTLLRTPADALAAAEEVAEAIAAGSAERERAG--AVLTP Mb3601c|M.bovis_AF2122/97 TVKALDDVGFFTLLQPQQWGGLQCDPALFFEATRRLASVCGSTGWVSSIV MUL_4141|M.ulcerans_Agy99 TVQALEDVGFFTLLQPEQWGGLQCDPTLFYEATRRLASACGSTGWVSSII MSMEG_4084|M.smegmatis_MC2_155 AFAMIQEARLGALRIPADLGGYGIGLVTFFEFLMRLATVDPNVAHALRAH MAB_1422c|M.abscessus_ATCC_199 QVRLLKEAGFGRLRIPTELGGAGLSVRQLFSAIIDVAQADPIVAHIFRTH MAV_3422|M.avium_104 GLKLVRDHRLGALRLARELGGAGYTAPEFFDYLVALAAADPDLAHILRIH TH_3721|M.thermoresistible__bu QIGWLKAAGFGAVRLPVSAGGRGATIPELTRLLIELSTADSNITQALRGH Mflv_5011|M.gilvum_PYR-GCK VLREAAELGMAAIYCGEDAGGSGLRRIDAVRIFEKLSTADPTVAAFLSIH Rv0752c|M.tuberculosis_H37Rv VLREAAELGMAAIYCRDDVGGSGLRRLDGVRIFEQLAIADPVTAAFLSIH MLBr_00737|M.leprae_Br4923 ALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN MMAR_4034|M.marinum_M LRDQAKQMGLFGYAIPPQWGGLGLNLVQDVELAMELGYTSLAVRSMFGTN Mvan_3173|M.vanbaalenii_PYR-1 QLRLVAESGLLGISVPTAHGGPGLPASTVVEVLRRLARADGAVGQLLLSH : ** :. . Mb3601c|M.bovis_AF2122/97 G-VHNWHLALFDQRAQEEVWGEDPSTR----------ISSSYAPMGAG-- MUL_4141|M.ulcerans_Agy99 G-VHNWHLALFDQLAQEEVWGSDPKTR----------ISSSYAPMGAG-- MSMEG_4084|M.smegmatis_MC2_155 Y-VFVDERLFEFRRGQERLWLDHIVAGDLFGNANTELTAKQAAGLEPSRF MAB_1422c|M.abscessus_ATCC_199 F-WFVEERLRTLADPVSAAWLTKVNEGNLFANA---FSEKGSLAVGSLVF MAV_3422|M.avium_104 Y-ALVEELQVTPRRPGSDRWIAVVAEGGLIGGAN---AEQSQKSVGGNHR TH_3721|M.thermoresistible__bu F-AFAEDRLVAAPGPGRDRWWQRFAAGDLAGNAW---TEIGDVVLGEANT Mflv_5011|M.gilvum_PYR-GCK N-MCAWMVDSFGTEEQRKLWVPKLASMDAIASYC---LTEPGAGSDASAL Rv0752c|M.tuberculosis_H37Rv N-MCAWMIDSFGTDEQRKDWIPRLATMGVIASYC---LTEPGAGSDAGAL MLBr_00737|M.leprae_Br4923 K-LGTMGLILRGSEELKKQVLPSLAAEGAMASYA---LSEREAGSDAASM MMAR_4034|M.marinum_M NGIAGQVLVGFGTDEQKARWLEPIASGDVVASFA---LTEPGAGSSPAGL Mvan_3173|M.vanbaalenii_PYR-1 F-VVAQAISGLGHTQPAPRIYADLLAGAQLGNAS-----AERGTAHALDR Mb3601c|M.bovis_AF2122/97 ----VVVDG----GYLVNGSWNWSSGCDHASWTFVGGPVIKD---GRPVD MUL_4141|M.ulcerans_Agy99 ----VVVDG----GYLVNGSWNWSSGCDHGTWCFAGGPVIKD---GRPVD MSMEG_4084|M.smegmatis_MC2_155 QARLSADGD----EYRLNGTKFYSTGSLYCQWVVVSAV-NDA---GA-VV MAB_1422c|M.abscessus_ATCC_199 NTRLLPVGD----AYRLNGEKFYSTGTLFADYLTVTAT-TDR---DS-VA MAV_3422|M.avium_104 DTRLVTTPD----GLRLRGRKFYSTGAQFSDYLRITAQ-DDD---GA-PT TH_3721|M.thermoresistible__bu KVAPSGDPG----TFVVNGQKFYSTGSIFADWIDLYAQRTDT---GE-FV Mflv_5011|M.gilvum_PYR-GCK RTKAVRSGD----EYVLDGVKQFISGAGTSDVYIVMARTGSD--GPKGIS Rv0752c|M.tuberculosis_H37Rv STRAVRHGSGKGGDYVLDGVKQFISGAAASDVYVVMARTGAE--GPRGVS MLBr_00737|M.leprae_Br4923 RTRAKADGD----DWILNGFKCWITNGGKSTWYTVMAVTDPDK-GANGIS MMAR_4034|M.marinum_M RTKAVRDGD----DWLITGQKRFITNAPVADLFVVFARTRPASDKSPGIA Mvan_3173|M.vanbaalenii_PYR-1 RTTVTRRDG----HWVLNGTKYYATGTLGATWIAVAARIEGRE--NGDTA . : * : :. . Mb3601c|M.bovis_AF2122/97 FGSFLIPRSEYEIKDV-WYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMN MUL_4141|M.ulcerans_Agy99 FGSFLIPRTEYRIDDV-WHVVGLRGTGSNTVVVKDVFVPRHRFLSYKAMN MSMEG_4084|M.smegmatis_MC2_155 RAIVPTNRDGVRIDDD-WDGIGQRLTASGTAVFDNVRVYTHEVFIR---- MAB_1422c|M.abscessus_ATCC_199 SVIVPGDRDGVRLVDD-WDGFGQRRTGTGTTIFSQVDVAADEILSETPY- MAV_3422|M.avium_104 AVVIPVDRAGVEHLDD-WDGIGQRQTGSGTTVFNDVAVADDEVFPLG--- TH_3721|M.thermoresistible__bu IAAVDAHADGVTHADD-WDGFGQRTTGSGTSTYRDVRVPAENLIPFA--- Mflv_5011|M.gilvum_PYR-GCK AFVVPKDTPGLSFGTD-EVKMGWNAQPTRQVILEGARVPADALLGGPDG- Rv0752c|M.tuberculosis_H37Rv AFIVEKGTPGLSFGAP-EAKMGWHAQPTAQVVLDGVRVPAEAMLGGADG- MLBr_00737|M.leprae_Br4923 AFIVHKDDEGFSIGPK-EKKLGIKGSPTTELYFDKCRIPGDRIIGEP--- MMAR_4034|M.marinum_M VFLVPAQSAGVEVGAK-DAKMGQEGAWTADVSFTDVRVDDAALVGGS--- Mvan_3173|M.vanbaalenii_PYR-1 TAFVRPDQEGVTLDLESWSAFGQRGTASGEVRLNNVVVDDDLLIDEGPP- . .* . : : .. Mb3601c|M.bovis_AF2122/97 DHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGMAYGAYAAHVEHQG--K MUL_4141|M.ulcerans_Agy99 DHTAGGLQTNTAPVYKMPWGTMHPTTITAPIVGMAYGAYDAHVEHQG--K MSMEG_4084|M.smegmatis_MC2_155 -------QAGHVDGYGSPMAQLYLTAVTAGILEAINRDAVTVLRGR---T MAB_1422c|M.abscessus_ATCC_199 -------DAAPVPTTQYASLQLYILAIVAGVLRAVVDDGEALLRSR---Q MAV_3422|M.avium_104 -------STIGVNRARGALVQLYLHAVAAGILRSLTEDAAALVRGR---R TH_3721|M.thermoresistible__bu ----------TRFRYQTAFYQLFHLATLAGIAHAATAELAQRVRGR---T Mflv_5011|M.gilvum_PYR-GCK -----EGTGFGIAMKGLNGGRINIAACSLGGAQAAYDKTVSYLADR---- Rv0752c|M.tuberculosis_H37Rv -----EGAGFGIAMSGLNGGRLNIAACSLGGAQAAFDKAGAYVRDR---- MLBr_00737|M.leprae_Br4923 ------GTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDR---- MMAR_4034|M.marinum_M -----EDIGYRAAMTSLARGRVHIAAIAVGAAQRALDESVAYASTA---- Mvan_3173|M.vanbaalenii_PYR-1 -----PDPITADPSVLGAFDQALHAAIDIGIARAALEDGAVFVRTRSRPW : Mb3601c|M.bovis_AF2122/97 RVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLIGNVSDEYALLAAGK MUL_4141|M.ulcerans_Agy99 RVRAAFAGEKAKDDPFAKVRIAEAASDIDAAWRQLMGNVGDEYALLSAGK MSMEG_4084|M.smegmatis_MC2_155 RTFAHGVGSSAKDDPLLQHVVGQLASDAFAGRAVVLEAARALADAAETVM MAB_1422c|M.abscessus_ATCC_199 RNFSHALTERPVDDPLLQRTLGELSATAFAAEATVLAAADAIEAATATLR MAV_3422|M.avium_104 RTYTFASADTPTADPQLLQIVGEIDAVAYTAHALVRNAAAELAPALQAAR TH_3721|M.thermoresistible__bu RTFSHGNAPRYAADPQIQQVVGEVMAAAFAAEAIALRAAEDXX------- Mflv_5011|M.gilvum_PYR-GCK ----QAFGGSLLDEPTIRFTLADMATGLETSRALLWRAATALDNDH---- Rv0752c|M.tuberculosis_H37Rv ----QAFGGSLLDEPTVRFTLADMATGLQTSRMLLWRAASALDDDD---- MLBr_00737|M.leprae_Br4923 ----KQFGESISTFQSIQFMLADMAMKVEAARLIVYAAAARAERGE---- MMAR_4034|M.marinum_M ----TQGGVTIGSFQLVQAMLADQQTGVLAGRALVRDAARMWVSG----- Mvan_3173|M.vanbaalenii_PYR-1 KEALDAGIERADQEPHVVRRFGELTARLYALEALLARGTALIDEAYAAPE ..: : . Mb3601c|M.bovis_AF2122/97 -------EIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPI MUL_4141|M.ulcerans_Agy99 -------EIPFDLRTRARRDQVRATGRSIASIDRLFEASGATALANDAPI MSMEG_4084|M.smegmatis_MC2_155 ADGVGDKSLLEAAKMACAKAKVTIENLVSRSGWQLFDVAGASATLRTKNL MAB_1422c|M.abscessus_ATCC_199 -DGVPDAQLAQEAQVAVAKAKVHIDAVALDAATKLLDLGGASAASRTRNL MAV_3422|M.avium_104 -DTGIDPELEAAASIAAARVKVAIQEPALRAASRVFDAGGASAVQASALL TH_3721|M.thermoresistible__bu ----------------------------------XRRRSSAAPPRRRTRP Mflv_5011|M.gilvum_PYR-GCK ----------PDRVELCAMAKRYVTDACFEVADQALQLHGGYGYLREYGL Rv0752c|M.tuberculosis_H37Rv ----------ADKVELCAMAKRYVTDTCFEVADQALQLHGGYGYLREYGL MLBr_00737|M.leprae_Br4923 ----------PDLGFISAASKCFASDIAMEVTTDAVQLFGGAGYTSDFPV MMAR_4034|M.marinum_M ----------ADRRIAPSAAKLFCTEMAGKVADLAVQIHGGSGYMRGVPV Mvan_3173|M.vanbaalenii_PYR-1 VTR----DAAAQASLTVAAAKALAQQDAVEIAGAIFELTGTSGTDGAVNL . Mb3601c|M.bovis_AF2122/97 QRFWRDAHAGRVHAAND-PERAYVIFGNHEFGLPPGDTMV MUL_4141|M.ulcerans_Agy99 QRFWRDAHAGRVHAAND-PERAYVIFGNNEFGLPAGDTMV MSMEG_4084|M.smegmatis_MC2_155 DRHWRNARTIASHNPVLYKTRALGDYLVNGNPLPRGSAF- MAB_1422c|M.abscessus_ATCC_199 DRHWRNIRTISLHNPVHYKARVIGQNLLHGTPLPANAYF- MAV_3422|M.avium_104 DRHWRNLRTLFSHNPTVYKARVLGDVVVNGAALPDTSFF- TH_3721|M.thermoresistible__bu RSCWDATRSSSVCVPRSRPPRCTSPWAPRPMSG------- Mflv_5011|M.gilvum_PYR-GCK EKIVRDLRVHRILEGTNEIMRVVIGRSAASRARAS----- Rv0752c|M.tuberculosis_H37Rv EKIVRDLRVHRILEGTNEIMRLVIGRAEAARFRATV---- MLBr_00737|M.leprae_Br4923 ERFMRDAKITQIYEGTNQIQRVVMSRALLR---------- MMAR_4034|M.marinum_M ERIYRDVRLLRLYEGTSEIQQLIIGSNLIKAANR------ Mvan_3173|M.vanbaalenii_PYR-1 DRHWRNVRVHSLHDPARWKYVHLGNHTLHDTRPPRLGLIL :