For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_3424 (-)

annotation: transcriptional regulator, MerR family protein
coordinates: 3495569 - 3496423
length: 284

MDNSGPSRTALATAYARACHQFADSPPIFADPLAARLLGVTEANLDDLSRHPAGHPATVARDRPRRLFFA
ARSRFADDVTARAVAAGVRQVVVLGAGLDTAAYRNSHPDVHVFEVDHPQTQAWKRERLAATGIDIPATAT
LVPVDFETQTLASELESASFSRTEPAVFVWLGVIFYLTPDAAGSTLDYIAGQARPVDLVFDYLQPAETDE
DRADLKNRAARLARAGEPLVNYLTSDELHRQLADFGFRVVEDLSGNELIGRYPHGAPVLDERALRASRIV
HARC
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_3424--100% (284)transcriptional regulator, MerR family protein
M. smegmatis MC2 155MSMEG_1482-6e-1734.39% (221) methyltransferase
M. smegmatis MC2 155MSMEG_1501-2e-1531.10% (283) methyltransferase, putative, family protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0151-9e-1930.31% (287) hypothetical protein Mb0151
M. gilvum PYR-GCKMflv_5025-9e-2033.05% (236) putative methyltransferase
M. tuberculosis H37RvRv0146-1e-1830.31% (287) hypothetical protein Rv0146
M. leprae Br4923MLBr_02640-9e-1728.42% (285) hypothetical protein MLBr_02640
M. abscessus ATCC 19977MAB_2253-1e-3438.35% (279) hypothetical protein MAB_2253
M. marinum MMMAR_1068-4e-1836.04% (222) O-methyltransferase
M. avium 104MAV_5149-1e-1729.57% (301) methyltransferase, putative, family protein
M. thermoresistible (build 8)TH_0301-2e-1730.98% (255) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_4762-5e-1828.17% (284) O-methyltransferase
M. vanbaalenii PYR-1Mvan_1346-3e-1831.74% (230) putative methyltransferase

CLUSTAL 2.0.9 multiple sequence alignment


TH_0301|M.thermoresistible__bu      --MX-------------GG-----------ASRDPKELINDPFAAPLVRA
Mvan_1346|M.vanbaalenii_PYR-1       --MARTDNDTWDLASSVGATATMVAAARAVATRAPRPVIDDPFAAPLVQA
Mflv_5025|M.gilvum_PYR-GCK          --MARTPDDSWDLASSVGATATMVAAGRAVASADPDPLINDPYAEPLVRA
MMAR_1068|M.marinum_M               --MTRTDQDSWDLASSVGATATMVAAARALASAEANPIIDDPFAAPLVRA
Mb0151|M.bovis_AF2122/97            ---MRTHDDTWDIKTSVGATAVMVAAARAVETDRPDPLIRDPYARLLVTN
Rv0146|M.tuberculosis_H37Rv         ---MRTHDDTWDIKTSVGATAVMVAAARAVETDRPDPLIRDPYARLLVTN
MUL_4762|M.ulcerans_Agy99           ---MRTHDDTWDIRTSVGATAVMVAAARAVETSKPEPLIRDPYARMLVTN
MLBr_02640|M.leprae_Br4923          ---MRTHDDTWDIKTSVGTTAVMVAAARAAETDRPDALIRDPYAKLLVTN
MAV_5149|M.avium_104                MSSLRTHDDTWDIKSSVGTTAVMVAAARAVETEQPDPLIRDPYAKLLVTN
MSMEG_3424|M.smegmatis_MC2_155      ------------MDN--SG-PSRTALATAYARACHQFADSPPIFADPLAA
MAB_2253|M.abscessus_ATCC_1997      ------------MSNPAAGKPDHTALRTALWRALHVELDPPPHVLTDLVG
                                                     .                       *     :  

TH_0301|M.thermoresistible__bu      VGIDFFTRIADGELTVADLDP---QSAPRVQANIDEVAVRTRFFDDHFAA
Mvan_1346|M.vanbaalenii_PYR-1       VGVDFFTRLATGELTTEELDTNDAESPVGMSRFADAMAARTRFFDDFFAE
Mflv_5025|M.gilvum_PYR-GCK          VGLDFFTRMLDGELDLSVFPD---SSPERAQAMIDGMAVRTRFFDDCCLA
MMAR_1068|M.marinum_M               VGLDFFTRLAEGEIDH---DE---QAQRDRQLVADSIAVRTRFFDDFFLD
Mb0151|M.bovis_AF2122/97            AGAGAIWEAMLDPTLVAKAAAIDAETAAIVAYLRSYQAVRTNFFDTYFAS
Rv0146|M.tuberculosis_H37Rv         AGAGAIWEAMLDPTLVAKAAAIDAETAAIVAYLRSYQAVRTNFFDTYFAS
MUL_4762|M.ulcerans_Agy99           ANAGVIWEAMLDQEMVAKVEAIDAETAATVEHMRSYQAVRTNFFDTYFAD
MLBr_02640|M.leprae_Br4923          TGAGALWEAMLDPSMVAKVEAIDAEAAAMVEHMRSYQAVRTNFFDTYFNN
MAV_5149|M.avium_104                SGAGVLWEAMLDPDIAARVEALDEESAAHLHHMRGYQAVRTHFFDTYFAD
MSMEG_3424|M.smegmatis_MC2_155      RLLGVTEANLDDLSRHPAGHP---ATVARDRPRRLFFAARSRFADDVTAR
MAB_2253|M.abscessus_ATCC_1997      LQLAAPEE---DWRERPDMDP---HGTVDSR---LGMVARARFVEDLVKR
                                               .                         ..*:.* :     

TH_0301|M.thermoresistible__bu      ATARG---IRQAVILAAGLDARAYRLRWP-DGTVVYEIDQPRVIEFKTRT
Mvan_1346|M.vanbaalenii_PYR-1       AMRAGPPPIRQGVILASGLDARAYRLSWP-QDMVLFEIDQPEVLTFKAAT
Mflv_5025|M.gilvum_PYR-GCK          AASAG---VRQVVILAAGLDARTYRLPWP-DGTVVYELDQPDVIAFKTQT
MMAR_1068|M.marinum_M               AARRG---VRQSVILAAGLDARAYRLPWP-SGSVVYEVDQPDVIDFKDTT
Mb0151|M.bovis_AF2122/97            AVAAG---IRQVVILASGLDSRAYRLDWP-AGTIVYEIDQPKVLSYKSTT
Rv0146|M.tuberculosis_H37Rv         AVAAG---IRQVVILASGLDSRAYRLDWP-AGTIVYEIDQPKVLSYKSTT
MUL_4762|M.ulcerans_Agy99           AVAAG---IRQVVILASGLDSRAYRLDWP-AGTTVYEIDQPQVLAYKSAT
MLBr_02640|M.leprae_Br4923          AVIDG---IRQFVILASGLDSRAYRLDWP-TGTTVYEIDQPKVLAYKSTT
MAV_5149|M.avium_104                AVAAG---IRQIVILASGLDSRAYRLDWP-AGTTVYEIDQPQVLAYKSTT
MSMEG_3424|M.smegmatis_MC2_155      AVAAG---VRQVVVLGAGLDTAAYRNSHP--DVHVFEVDHPQTQAWKRER
MAB_2253|M.abscessus_ATCC_1997      RAAEG---VGQYVILGAGLDTFVQRHPDAGERLTVFEVDRPETQAWKRKR
                                        *   : * *:*.:***: . *   .     ::*:*:* .  :*   

TH_0301|M.thermoresistible__bu      LARLGAEPTAERRTVAADLRH--DWPAALTAAGFDPAAPTVWIAEGLFGY
Mvan_1346|M.vanbaalenii_PYR-1       LADLGVRPSTKLATVAVDLRN--DWPAALAEAGFDASAPTAWIAEGLLGY
Mflv_5025|M.gilvum_PYR-GCK          LRNLGAEPAATQRPVPVDLRE--DWPAALRAAGFDATRPTAWLAEGLLIY
MMAR_1068|M.marinum_M               MSALGAVPTATRRTVRVDLRD--DWPAALRHNGFDTTQPTAWSAEGLLMY
Mb0151|M.bovis_AF2122/97            LAENGVTPSAGRREVPADLRQ--DWPAALRDAGFDPTARTAWLAEGLLMY
Rv0146|M.tuberculosis_H37Rv         LAENGVTPSAGRREVPADLRQ--DWPAALRDAGFDPTARTAWLAEGLLMY
MUL_4762|M.ulcerans_Agy99           LAENGVTPAAERREVAIDLRQ--DWPSALRAAGFDPSARTAWLAEGLLMY
MLBr_02640|M.leprae_Br4923          LAEHGVTPTADRREVPIDLRQ--DWPPALRSAGFDPSARTAWLAEGLLMY
MAV_5149|M.avium_104                LAENGVTPSADRREVAVDLRQ--DWPAALRAAGFDPTQRTAWLAEGLLMY
MSMEG_3424|M.smegmatis_MC2_155      LAATGIDIPATATLVPVDFET-QTLASELESASFSRTEPAVFVWLGVIFY
MAB_2253|M.abscessus_ATCC_1997      LTDCGFQIPRWQRLVPVDFEAGACWREQLEIAGFDSGRPAVVASTGVSMY
                                    :   *   .     *  *:.        *   .*.    :.    *:  *

TH_0301|M.thermoresistible__bu      LPPDAQDRLLDQITDLSAVGSRLGVEGVPAHADADEDEVRQRMRILAERW
Mvan_1346|M.vanbaalenii_PYR-1       LPPDAQDRLLDTIGELSAPGSRLAVESVPTHHEADQEELREKMKESSDRW
Mflv_5025|M.gilvum_PYR-GCK          LPPEAQDALFDTVTALSAPGSTLATEYVPGIVDFDG----AKARALSEPL
MMAR_1068|M.marinum_M               LPPDAQDRLFDAISGLSAPGSRLATEYHPDPGSTMA----ERAQQFNQRW
Mb0151|M.bovis_AF2122/97            LPAEAQDRLFTQVGAVSVAGSRIAAETAPVHGEERRAEMRARFKKVADVL
Rv0146|M.tuberculosis_H37Rv         LPAEAQDRLFTQVGAVSVAGSRIAAETAPVHGEERRAEMRARFKKVADVL
MUL_4762|M.ulcerans_Agy99           LPAEAQDRLFTQIGELSCAGSRIAAETAGNHADERREQMRERFRKVAQTL
MLBr_02640|M.leprae_Br4923          LPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDAL
MAV_5149|M.avium_104                LPAEAQDRLFTLIGELSPAGSRVAAETAPNHADERRQQMRERFKKVADEI
MSMEG_3424|M.smegmatis_MC2_155      LTPDAAGSTLDYIAGQARPVDLVFDYLQP-------AETDEDRADLKN-R
MAB_2253|M.abscessus_ATCC_1997      LTRAAIVATLRQCASLATGSTLAMTFLLPD------ALLNESARTVRQLI
                                    *.  *    :      :                              :  

TH_0301|M.thermoresistible__bu      RAHGLDLDFSELIYLGD-RADVAGYLADRGWRCTALTANELLVRTG-LPP
Mvan_1346|M.vanbaalenii_PYR-1       RSHGFDVDFSELVFLGE-RADVTDYLRDRGWTVDATPTNQLLTRYG-LAP
Mflv_5025|M.gilvum_PYR-GCK          REHGLDIDMPSLVYTGA-RTPVMDHLRGAGWQVSGTARAELFARFGRPLP
MMAR_1068|M.marinum_M               VRLGCDIDLSGLFYEGE-RSNVVDYLTEHGWHVAARPRQDLFTDYGRVFP
Mb0151|M.bovis_AF2122/97            G-IEQTIDVQELVYHDQDRASVADWLTDHGWRARSQRAPDEMRRVGRWVE
Rv0146|M.tuberculosis_H37Rv         G-IEQTIDVQELVYHDQDRASVADWLTDHGWRARSQRAPDEMRRVGRWVE
MUL_4762|M.ulcerans_Agy99           G-LEQTIDVHELIYHDPDRAPLGQWLNEHGWRANAQNACDEMHRVGRWVE
MLBr_02640|M.leprae_Br4923          G-FEQAVDVQELIYHDENRAVVADWLNRHGWRATAQSAPDEMRRVGRWGD
MAV_5149|M.avium_104                G-FEQTVDVGELMYRDDHRADVTEWLNAHGWRATAEHSTAAMRRLGRWIE
MSMEG_3424|M.smegmatis_MC2_155      AARLARAGEPLVNYLTS--DELHRQLADFGFRVVEDLSGNEL--IGRYPH
MAB_2253|M.abscessus_ATCC_1997      VARAAAAGTPWLSFFAP--EEMLSLARECGFAQASYVSGREL--IERYVP
                                           .   : :       :       *:          :        

TH_0301|M.thermoresistible__bu      AEND--GRVTEVVYLSSEKSPGKRAG
Mvan_1346|M.vanbaalenii_PYR-1       LDSD--EGFAEVVYVSATR-------
Mflv_5025|M.gilvum_PYR-GCK          QDADGTDPLGEIVYVSATLAADA---
MMAR_1068|M.marinum_M               -DAD-TSQLRSIVAVTATFGEAG---
Mb0151|M.bovis_AF2122/97            GVPMADDPTAFAEFVTAERL------
Rv0146|M.tuberculosis_H37Rv         GVPMADDPTAFAEFVTAERL------
MUL_4762|M.ulcerans_Agy99           GVPMADDKQAYSDFVTAERL------
MLBr_02640|M.leprae_Br4923          GVPMADDKDAFAEFVTAHRL------
MAV_5149|M.avium_104                NVPLADDKDAFSDFVVAERR------
MSMEG_3424|M.smegmatis_MC2_155      GAPVLDERALRASRIVHARC------
MAB_2253|M.abscessus_ATCC_1997      AAGLSAEEFLVATV------------