For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRILISGASISGPVLAYWLSRYGFDVTVVERAPQLRKAGGHAVDLFRPSMEISAKMGVLSKIEALATGTE TLTWYREGAQRPVRVNLAKIFSATSDHHVEIMRDDLSEIYYEASRNDAEYLFGDSITAISPDGRVSFEHA APRCFDIVVGADGLHSNVRRLVFGEDAGHTQFLGGYLAVVSVPKGLAHDGEMVGHVGPGRMAAVYTAAPL DDARLLFLFRTQEELQYHYRDVLRQKELLREAIAGMHPQVDLWLEELDRTPAFYFDSITQLQLDTWSRGR VTLVGDAGYCPGPAVGGSTSLSVLGAYILAGELAQAGGDYARAFAAYEREMADPVSRSRAFASGVAVSLI PRSKAGVWALTHGAQLVSMLPGGLTKAVAKLNTKGVRLYDSMRFKEYAPPRPG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_4675 | - | - | 100% (403) | membrane-associated oxidoreductase |
M. marinum M | MMAR_4180 | - | 3e-63 | 41.40% (343) | oxidoreductase |
M. marinum M | MMAR_2185 | - | 3e-51 | 37.28% (338) | oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0590c | - | 2e-49 | 34.97% (346) | hypothetical protein Mb0590c |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv1260 | - | 2e-65 | 41.71% (350) | hypothetical protein Rv1260 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2678 | - | 1e-119 | 53.62% (401) | hypothetical protein MAB_2678 |
M. avium 104 | MAV_0984 | - | 1e-167 | 72.61% (398) | hypothetical protein MAV_0984 |
M. smegmatis MC2 155 | MSMEG_5719 | - | 1e-143 | 63.48% (397) | oxidoreductase |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0294 | - | 0.0 | 95.53% (403) | membrane-associated oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_5278 | - | 1e-17 | 25.00% (352) | monooxygenase, FAD-binding |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4675|M.marinum_M MR-ILISGASISGPVLAYWLSRYGFDVTVVERAPQLRKAGGHAVDLFRPS MUL_0294|M.ulcerans_Agy99 MR-ILLSGASISGSVLAFWLSRYGFDVTVVERAPQLRKAGGHAVDLFRPS MAV_0984|M.avium_104 MR-ILISGASIAGPVLAYWLTRYGFEVTVVERAPTLRKTGGHAVDLFRPA MSMEG_5719|M.smegmatis_MC2_155 MK-VLISGASIAGPVLAYWLSRHGFEVTVVERSPVLRKTGGHAVDLFRPA MAB_2678|M.abscessus_ATCC_1997 MR-VLISGASIAGPVLAFWLAHYGFEVTVIERSPAPRKSGGHAVDLFKPA Rv1260|M.tuberculosis_H37Rv MKTVVVSGASVAGTAAAYWLGRHGYSVTMVERHPGLR-PGGQAIDVRGPA Mb0590c|M.bovis_AF2122/97 MK-VAISGAGVAGAALAHWLQRTGHTPTVIERAPKFR-TGGYMIDFWGVG Mvan_5278|M.vanbaalenii_PYR-1 MK-VVIVGAGMGGMSAAIALRQIGIDTVVYERVTENK-PVGAAISVWSNG *: : : **.:.* * * : * .: ** . : . * :.. . MMAR_4675|M.marinum_M MEISAKMGVLSKIEALATGTETLTWY-REGAQRPVRVNLAKIFSATSDHH MUL_0294|M.ulcerans_Agy99 MEISAKMGVLSKIEALATGTEILTWY-REGARRPVRVNLAKIFGATSDQH MAV_0984|M.avium_104 MEISAKMGVLPRIEDLATGTTRLTLY-REGRPQPSRIDLTKIYAASSDRH MSMEG_5719|M.smegmatis_MC2_155 MEISERMGVLPEIEAHATGTTSMVVH-RPGTSRPARLDYLKVVGVISDRH MAB_2678|M.abscessus_ATCC_1997 MDIIEMMGILDHVEAQSAGTEVLSIH-REGK-RLIDLPEVLIFSAVSERH Rv1260|M.tuberculosis_H37Rv LDVLERMGLLAAAQEHKTRIRGASFVDRDGNELFRDTESTPTGGPVNSPD Mb0590c|M.bovis_AF2122/97 YQVAKRMGITDQIAAAGYHMEHVRSVGPTGK-VKADLGVDVFRRMVGDDF Mvan_5278|M.vanbaalenii_PYR-1 VKCLNYLGLQEETAELGGKVETMSYVDGHTGDTMCRFSMHPLIEQVGQRP . :*: .. MMAR_4675|M.marinum_M VEIMRDDLSEIYYEAS-RNDAEYLFGDSITAISPDGR---VSFEHAAPRC MUL_0294|M.ulcerans_Agy99 VEIMRDDLSEIYYEAS-RHDTEYLFGDSITAISPDGR---VSFEQAAPRC MAV_0984|M.avium_104 VEIMRDDLSEVYYDAA-RDDVEYLFGDSITAIEPDGT---VTFEHCAPRT MSMEG_5719|M.smegmatis_MC2_155 IEIMRDDLSEIYFRAG-RDDVEYLFGDTITSISPDGD---VTFEHHPPRR MAB_2678|M.abscessus_ATCC_1997 VEIMRDDLSEILYGAS-APSAEYIFGDSITALTDDGAGVRVAFDRASDRR Rv1260|M.tuberculosis_H37Rv IELLRDDLVELLYGAT-QPSVEYLFDDSISTLQDDGDSVRVTFERAAARE Mb0590c|M.bovis_AF2122/97 TSLPRGDLAAAIYTTI-EDQVETIFDDSIATIDEHRDGVRLTFERTAPRD Mvan_5278|M.vanbaalenii_PYR-1 YPIARAELQLMLMKAYGIDDINFGMKMVGVENDTAGSAAKATFADGTTVS : * :* : . : : :* . MMAR_4675|M.marinum_M FDIVVGADGLHSNVRRLVFG-EDAGHTQFLGGYLAVVSVPKGLAHDGEMV MUL_0294|M.ulcerans_Agy99 FDIVVGADGLHSNVRRLVFG-EDAGHTQFLGGYLAVVSVPKGLAHDGEMV MAV_0984|M.avium_104 FDVVVGADGLHSNVRRLTFG-DEAGLTRFLGGYLSVVSAPKTLVGPGEMV MSMEG_5719|M.smegmatis_MC2_155 FDVVVGADGLHSGVRRLVFG-DNVSEN-FLAGYLSVVSVPKSLARDGEMT MAB_2678|M.abscessus_ATCC_1997 FDLVIGADGLHSHVRGLVFG-PESGYSHWLGQYLAVASIPNYLDLSDRAL Rv1260|M.tuberculosis_H37Rv FDLVIGADGLHSNVRRLVFG-PEEQFVKRLGTHAAIFTVPNFLELDYWQT Mb0590c|M.bovis_AF2122/97 FDLVIGADGLHSNVRRLVFG-PERDFEHYLGCKVAACVVDGYRPRD--ER Mvan_5278|M.vanbaalenii_PYR-1 ADVIIGADGAGSITREYVLGGPVSRRYAGYVNYNGLVSTDDAIGPATEWT *:::**** * .* .:* . MMAR_4675|M.marinum_M GHVGPGRMAAVYTAAPLDDARLLFLFRTQEELQYHYRDVLRQKELLREAI MUL_0294|M.ulcerans_Agy99 GHVGPGRMAAFYTAAPLDDAHLLFLFRTQEELRYHYRDVLRQKELLREAI MAV_0984|M.avium_104 GHVGVGRFAGIYTADHLDDARAVFLFRSAAELAYDHRDTARQKELLREAF MSMEG_5719|M.smegmatis_MC2_155 SFLKPGHMAAVYTADHLEDARAVFIFRPSRPLDYDHRDVERQKAQLRAAF MAB_2678|M.abscessus_ATCC_1997 MYPQVDKIAGMYSAAQLSDARAFFLFRTPEPLDYHHRDVGRQKALLGEVY Rv1260|M.tuberculosis_H37Rv WHYGDSTMAGVYSARNNTEARAALAFMDT-ELRIDYRDTEAQFAELQRRM Mb0590c|M.bovis_AF2122/97 SYVLYNTVDRQLARFALRGDRTMFLFVFRAEHDNPG---VAPKDELRDQF Mvan_5278|M.vanbaalenii_PYR-1 TYVGDG---KRVSVMPVSDDRFYFFFDVVEPQGSPYEE-GRVREVLRAHF . . : : : * * MMAR_4675|M.marinum_M AGMHPQVDLWLEELDRTPAFYFDSITQLQLDTWSRGRVTLVGDAGYCPGP MUL_0294|M.ulcerans_Agy99 AGIHPQVDLWLEELDRTPAFYFDSITQLQLDTWSRGRVTLVGDAGYCPGP MAV_0984|M.avium_104 AGMHDEVDGWLAETERTPTFYFDSITQLRTDRWSRRRVTLVGDAGYCPGP MSMEG_5719|M.smegmatis_MC2_155 EHIAPEVDRWLDEVPRTPAFYFDAITQLEMTTWSRGRVTLVGDAGYCPGP MAB_2678|M.abscessus_ATCC_1997 ADVGWELPRMLAEVDATDTFYMDSITQLRMDTWSKGRITLVGDAGYCPGP Rv1260|M.tuberculosis_H37Rv AEDGWVRAQLLHYMRSAPDFYFDEMSQILMDRWSRGRVALVGDAGYCCSP Mb0590c|M.bovis_AF2122/97 GDVGWESRDILAALDDVEDLYFDVVSQIRMDRWSRGRVLLIGDAAGCISL Mvan_5278|M.vanbaalenii_PYR-1 AGWTPGVQTLIDTLDPLATNRVEILDLDPFHTWVKGRVAVLGDAAHNTTP : .: : * : *: ::***. MMAR_4675|M.marinum_M AVGGSTSLSVLGAYILAGELAQAGGDYARAFAAYEREMADPVSRSRAFAS MUL_0294|M.ulcerans_Agy99 AVGGSTSLSVLGACILAGEPAQAGGDYARAFAAYEREMADPVSRSHTFAS MAV_0984|M.avium_104 AVGGSTSLAVLGAYVLAGELARADGDHLRAFAAYELQMRESVRRSRSFAR MSMEG_5719|M.smegmatis_MC2_155 AVGGSTSLAVYGAYVLAAEMVRAGEDYPAAFDAYERTMLAPVVGSRKLAR MAB_2678|M.abscessus_ATCC_1997 AVGGSTSLAVVGAYVLAGEIAAAAGDHARAYPAYEAALREYVEVSRKLAL Rv1260|M.tuberculosis_H37Rv LSGQGTSVALLGAYILAGELKAAGDDYQLGFANYHAEFHGFVERNQWLVS Mb0590c|M.bovis_AF2122/97 LGGEGTGLAITEAYVLAGELARAGGDHRRAFDAYEKRLRPFIEGKQASAA Mvan_5278|M.vanbaalenii_PYR-1 DIGQGGCSAMEDAIALQWAFKDHPDDVHAALAAYQSARTERAADLVLRAR * . :: * * * . *. . MMAR_4675|M.marinum_M GVAVSLIPRSKAGVWALTHGAQLVSMLPGGLTKAVAKLNTKG-VRLYDSM MUL_0294|M.ulcerans_Agy99 GVAVSLIPRSKAGVWALTHGAQLVSMLPGGLTKAVAKLNTKG-VRLYDSM MAV_0984|M.avium_104 AAARGVIPGSRAGVWALTRGAQLVSAMPTSLARALAKLNTKG-VRMHDSM MSMEG_5719|M.smegmatis_MC2_155 FNAKTVVPASGLGIRALVGVGQLISVLPVGLTRSLARLNDKG-VRLYDTM MAB_2678|M.abscessus_ATCC_1997 TASGTLVPKSRLGLCTLVHGARILGHLPSSLTRSLSRLVAARRINIHDTF Rv1260|M.tuberculosis_H37Rv DN----IPGG-------------------------APIPQEEFERIVHSI Mb0590c|M.bovis_AF2122/97 KFIWFFRHPN-----------------------PIRPVVSQRCDAHDELR Mvan_5278|M.vanbaalenii_PYR-1 KRCDVTHAKD----------PQVTSRWYDELRNEDGTNIIRGIVGNIVGG . MMAR_4675|M.marinum_M RFKEYAPPRPG MUL_0294|M.ulcerans_Agy99 RFKEYAPPRPG MAV_0984|M.avium_104 PVPDYAGSDV- MSMEG_5719|M.smegmatis_MC2_155 PLPQWPARLNG MAB_2678|M.abscessus_ATCC_1997 ALRDYQGLISR Rv1260|M.tuberculosis_H37Rv TIKDY------ Mb0590c|M.bovis_AF2122/97 PAGDAVRRQRA Mvan_5278|M.vanbaalenii_PYR-1 PLTPVTAATEG