For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_1832 (-)

annotation: integral membrane protein
coordinates: 2231550 - 2232422
length: 290

MNSALVALAFAAGSVAALNPCGFAMLPAYLLLVVRGQHGGESGEVGSPIGAVGRAIAATIGMALGFLTVF
GAFGALTISAASTVQRYLPYLTVLIGVLLFGLGVWLLSGRELAALTPSGFGPRWAPTARLGSMYGYGVSY
AVASLSCTIGPFIAVTGAGLRGGSILGAVAIYLAYIAGLTMVVGALAIAAATASSALADRLRRVLPLVNR
ISGGLLVVVGLYVGYYGYYEVRLTSGLLVDPQDRVIGAAGRIQGELAGWVHQHGIWPWAVALTLLVAGAF
SVSWYRRARR
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_1832--100% (290)integral membrane protein
M. marinum MMMAR_5058-5e-7049.32% (292) hypothetical protein MMAR_5058
M. marinum MMMAR_0873ccsA4e-0928.51% (235) cytochrome C-type biogenesis protein, CcsA

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2902c-1e-12475.86% (290) integral membrane protein
M. gilvum PYR-GCKMflv_3217-1e-2527.62% (286) cytochrome c biogenesis protein, transmembrane region
M. tuberculosis H37RvRv2877c-1e-12375.86% (290) integral membrane protein
M. leprae Br4923MLBr_02411-7e-0627.12% (236) putative cytochrome C-type biogenesis protein
M. abscessus ATCC 19977MAB_3244-2e-6953.01% (249) mercuric transporter MerT
M. avium 104MAV_3728-1e-10767.93% (290) cytochrome C biogenesis protein transmembrane region
M. smegmatis MC2 155MSMEG_3541-4e-9462.04% (274) cytochrome C biogenesis protein transmembrane region
M. thermoresistible (build 8)TH_3805-6e-6159.42% (207) PUTATIVE putative NADH-quinone oxidoreductase, L subunit
M. ulcerans Agy99MUL_2080-1e-15997.93% (290) integral membrane protein
M. vanbaalenii PYR-1Mvan_3693-2e-0825.45% (224) cytochrome c biogenesis protein, transmembrane region

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_1832|M.marinum_M               MNSALVALAFAAGSVAALNPCGFAMLPAYLLLVVRGQHGGESGEVGSPIG
MUL_2080|M.ulcerans_Agy99           MNSALVALAFAAGSVAALNPCGFAMLPAYLLLVVRGQHGGESGEAASPIG
Mb2902c|M.bovis_AF2122/97           MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVHGQDS--AGRTG-PLS
Rv2877c|M.tuberculosis_H37Rv        MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVYGQDS--AGRTG-PLS
MAV_3728|M.avium_104                MDRGLVGLAVAAGMVAALNPCGFAMLPAYLLLVVRG-----AGARAPGVA
TH_3805|M.thermoresistible__bu      --------------------------------------------------
MAB_3244|M.abscessus_ATCC_1997      --------------------------------MVRG-----PGAEIGKSQ
MSMEG_3541|M.smegmatis_MC2_155      MEQDLLGLAFGAGLVAALNPCGFALLPGYLALVVRG-----ENAATG-AR
MLBr_02411|M.leprae_Br4923          -----------------------------------------------MTG
Mvan_3693|M.vanbaalenii_PYR-1       -----------------------------------------------MDG
Mflv_3217|M.gilvum_PYR-GCK          --MNLLALAFTAGMLAPVNPCGFALLPAWITGTIAT------GGTDAVLV
                                                                                      

MMAR_1832|M.marinum_M               AVGRAIAATIGMALGFLTVFGAFGALTISAASTVQRYLPYLTVLIGVLLF
MUL_2080|M.ulcerans_Agy99           AVGRAIAATIGMALGFLTVFGAFGALTISAASTVQRYLPYLTVSIGVLLF
Mb2902c|M.bovis_AF2122/97           AVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALI
Rv2877c|M.tuberculosis_H37Rv        AVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALI
MAV_3728|M.avium_104                AAGRALAASAGMALGFLTVFGLFGALTVSAAGAVQRWLPYATVVVGVLLV
TH_3805|M.thermoresistible__bu      ---------------------------------VQRYLPVATVVVGAGLV
MAB_3244|M.abscessus_ATCC_1997      ALARAVIATVVMAGGFVAVFTVFGLLTVSVASVIQRYLPFVTVVFGIGLV
MSMEG_3541|M.smegmatis_MC2_155      ALGRAALATVAMAAGFVAVFGTFTALTVATASTVQRYLPYVTVVIGLILV
MLBr_02411|M.leprae_Br4923          FTEIAAAGPLLVALGVCMLAGLVSFVSPCVVPLVPGYLSYLAAVVGVSHE
Mvan_3693|M.vanbaalenii_PYR-1       VTAIATSGHVLLAVFVSALAGLVSFASPCVVPLVPGYLSYLAAVVGVDDQ
Mflv_3217|M.gilvum_PYR-GCK          RLARALRTGAVLTIGFTGTLTLAGIAISAGARTLVTAAPWLGITIGLTLA
                                                                     :    .     .*    

MMAR_1832|M.marinum_M               GLGVWLLSGRELAALTPSGFGPR--WAPTARLGSMYGYGVSYAVASLSCT
MUL_2080|M.ulcerans_Agy99           GLGVWLLSGRELAALTPSGFGPR--WAPTARLGSMYGYGVSYAVASLSCT
Mb2902c|M.bovis_AF2122/97           ALGGWLLLGRGLTALTPRSLGVR--WAPTVRLGSMYGYGISYAVASLSCT
Rv2877c|M.tuberculosis_H37Rv        ALGGWLLLGRGLTALTPRSLGVR--WAPTVRLGSMYGYGISYAVASLSCT
MAV_3728|M.avium_104                ALGGWLLAGRSLSALTPRPVGPL--WAPTARLGSMYGYGISYAIASLSCT
TH_3805|M.thermoresistible__bu      ALGFWLLIGRELTGLTSVTRRVE--RAPTARIGSMFGYGVSYAVASLSCT
MAB_3244|M.abscessus_ATCC_1997      ILGLWLLAGRDIIALMPKMLDAN---APTTRLGSMFGYGVGYAVASLSCT
MSMEG_3541|M.smegmatis_MC2_155      CLGIWLLAGRRLGVLMPNSLADNPRWAPTARMGSMLGYGVGYALASLSCT
MLBr_02411|M.leprae_Br4923          ETQPGAGVIKTPPAARWRVAGSAVLFVAGFTTVFVLDTVAVLGMTTVLTT
Mvan_3693|M.vanbaalenii_PYR-1       ARAQPLG------RARLRLAGAAGLFVAGFTAVFLMGTVAILGLTTTLIT
Mflv_3217|M.gilvum_PYR-GCK          ILGGFMLTGRTIGLRMPARTRHR---PDSPTAGGVLAAGIGYALASLSCT
                                                                      :       .:::   *

MMAR_1832|M.marinum_M               IGPFIAVTGAGLRGGSILGAVAIYLAYIAGLTMVVGALAIAAATASSALA
MUL_2080|M.ulcerans_Agy99           IGPFIAVTGAGLRGGSILGAVAIYLAYIAGLTMVVGALAIAAATASSALA
Mb2902c|M.bovis_AF2122/97           IGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALA
Rv2877c|M.tuberculosis_H37Rv        IGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALA
MAV_3728|M.avium_104                VGPFLAVTAAGLRSGSLLTGAAVYLGYVAGLTLVVGVLAVAAATAGAATA
TH_3805|M.thermoresistible__bu      VAPFLAVTGAGLRGQSLWSTLSIYLAYAAGFTLIVGVLAMAAALTHSALA
MAB_3244|M.abscessus_ATCC_1997      IGPFLAVTSTTFESGSLFDGVMVYLAYASGITLVVGTLAVSTALASTMLL
MSMEG_3541|M.smegmatis_MC2_155      IGPFLAVTGAGLRSGTPLRGVGVFASYAAGFTLVVGVLAVATALARTVVI
MLBr_02411|M.leprae_Br4923          HQVLLQRVGGVLTIVMGLVFVGLLPALQRQVQFSLRQLTTVAGAPVLGTV
Mvan_3693|M.vanbaalenii_PYR-1       NGVLLQRIGGVVTIVMGLVFMGFFPALQRDARFTPTSLSTLWGAPLLGAV
Mflv_3217|M.gilvum_PYR-GCK          FGVLLAVIAQAQATSGWGGLLAVFTAYTAGAATILMLVSVGTAIAGTALT
                                       ::   .             .  .           ::   . .     

MMAR_1832|M.marinum_M               DRLRRVLPLVNRISGGLLVVVG--LYVGYYGYYEVRLTSGLLVDPQDRVI
MUL_2080|M.ulcerans_Agy99           DRLRRVLPLVNRISGGLLAVVG--LYVGYYGYYEVRLTSGLLVDPQDRVI
Mb2902c|M.bovis_AF2122/97           DRLRRILPFVNRISGALLVVVG--LYVGYYGLYELRLIAGVGANPQDAVI
Rv2877c|M.tuberculosis_H37Rv        DRLRRILPFVNRISGALLVVVG--LYVGYYGLYELRLIAGVGANPQDAVI
MAV_3728|M.avium_104                DRLRRMVPFVDRISGAVLVLVG--LYVAYYGGYEVRLFG-AGGDPRDAVI
TH_3805|M.thermoresistible__bu      VRLRRIGRYVNRISGVLLVAVG--GYVAYYGLYELRLFW-GGANPQDPVI
MAB_3244|M.abscessus_ATCC_1997      KAMRRALPYLNRVSGAILIVVG--AYVGYYGSYEVRLFH-ANGNPDDPII
MSMEG_3541|M.smegmatis_MC2_155      DRMRRILPYANRISGALLILVG--AYVGYYGLYEVRLFS-GSGDPHDPVI
MLBr_02411|M.leprae_Br4923          FALGWTPCLGPTLSGVITVAAATDGVNVTRGILLVIAYCMGLGIPFVLLA
Mvan_3693|M.vanbaalenii_PYR-1       FGLGWTPCLGPTLTGVIAVASASEGPNVVRGIVLVVAYCVGLGAPFVLFA
Mflv_3217|M.gilvum_PYR-GCK          RHLGILARHGTRVTAVVLIATG--AYLAWYWLPAATGHTASGGN------
                                      :         ::. :    .                            

MMAR_1832|M.marinum_M               GAAGRIQGELAGWVHQHGIWPWAVALTLLVAGAFSVSWYR--RARR----
MUL_2080|M.ulcerans_Agy99           GAAGRIQGELAGWVHQHGIWPWVVVLTLLVAGAFSVSWYR--RARR----
Mb2902c|M.bovis_AF2122/97           AAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFR--RVRR----
Rv2877c|M.tuberculosis_H37Rv        AAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFR--RVRR----
MAV_3728|M.avium_104                GAAGRLQGALAGWVHRHGLWPWALALLALAAVRFGRARRRGRRADRLPDP
TH_3805|M.thermoresistible__bu      EAAARAQGAIAGWVHRHGGGPWLAATAVLMLVVLATGFVA--RIRRSARR
MAB_3244|M.abscessus_ATCC_1997      NAAGKIQRTISGWVYLHGAWPWLFILGLVAVGAAIWWRTNVSEPPSN---
MSMEG_3541|M.smegmatis_MC2_155      AAAGKIQGTLAGWVHQHGALPWAIGL-LVLIGLGLLWRVRIFARRSPARR
MLBr_02411|M.leprae_Br4923          SGSAQAVAGLR-WLRQYGRAIQVFGGMLLIAIGAALIAGVWDDFVSWLRD
Mvan_3693|M.vanbaalenii_PYR-1       LASGRAMRALG-WLRRNARRIQVFGGVLLVAVGIALVTGLWNEVVSWVRD
Mflv_3217|M.gilvum_PYR-GCK          -LLTGWSATATGWLQDHALPASVIAAFAVVVSAVAAYWTTHRRPITGKQR
                                                *:   .          :                     

MMAR_1832|M.marinum_M               --------------------------------------------------
MUL_2080|M.ulcerans_Agy99           --------------------------------------------------
Mb2902c|M.bovis_AF2122/97           --------------------------------------------------
Rv2877c|M.tuberculosis_H37Rv        --------------------------------------------------
MAV_3728|M.avium_104                AAAAAPQVADQHHEDQRRESDQKPVLDVADVVAAQHGQQQPEDDQADDVP
TH_3805|M.thermoresistible__bu      --------------------------------------------------
MAB_3244|M.abscessus_ATCC_1997      --------------------------------------------------
MSMEG_3541|M.smegmatis_MC2_155      ATADDAP-------------------------------------------
MLBr_02411|M.leprae_Br4923          AVVSDMRVSI----------------------------------------
Mvan_3693|M.vanbaalenii_PYR-1       AFVSNTTLPI----------------------------------------
Mflv_3217|M.gilvum_PYR-GCK          RR------------------------------------------------
                                                                                      

MMAR_1832|M.marinum_M               --------------------------------------------------
MUL_2080|M.ulcerans_Agy99           --------------------------------------------------
Mb2902c|M.bovis_AF2122/97           --------------------------------------------------
Rv2877c|M.tuberculosis_H37Rv        --------------------------------------------------
MAV_3728|M.avium_104                GPVVDPAPSPRRRRHLDGVDAGEVLDLGTGHGESPSDRIGLSNPDSGTTA
TH_3805|M.thermoresistible__bu      --------------------------------------------------
MAB_3244|M.abscessus_ATCC_1997      --------------------------------------------------
MSMEG_3541|M.smegmatis_MC2_155      --------------------------------------------------
MLBr_02411|M.leprae_Br4923          --------------------------------------------------
Mvan_3693|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_3217|M.gilvum_PYR-GCK          --------------------------------------------------
                                                                                      

MMAR_1832|M.marinum_M               -------------------
MUL_2080|M.ulcerans_Agy99           -------------------
Mb2902c|M.bovis_AF2122/97           -------------------
Rv2877c|M.tuberculosis_H37Rv        -------------------
MAV_3728|M.avium_104                GRARGARPHHGPRRWRAAQ
TH_3805|M.thermoresistible__bu      -------------------
MAB_3244|M.abscessus_ATCC_1997      -------------------
MSMEG_3541|M.smegmatis_MC2_155      -------------------
MLBr_02411|M.leprae_Br4923          -------------------
Mvan_3693|M.vanbaalenii_PYR-1       -------------------
Mflv_3217|M.gilvum_PYR-GCK          -------------------