For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_1309 (-)

annotation: membrane transporter
coordinates: 1597973 - 1599118
length: 381

VEVSRALLFEVGALLTTLALLGAIARRFALSPIPVYLLAGLSLGKGGVLPVAAADDFVATGAPIGIVLLL
LTLGLEFSATEFASSLRHHMPSAMVDIVLNATPGAVAGWLLGLDGVAILALAGVTYISSSGVVARLLEDL
RRLGNRETPAVLSVLVLEDFAMAGYLPLFTVLALHGDWLHALGGTLAAIAALLGAFAASFYWGHHFGRLF
AHPDSEQLLLRVLGITLMVAALAETLHASAAVGAFLVGLTLTGETAERARRVLGPLRDLFAAIFFLGIGL
SVAPKELIPALPVAMVLAVVTAATKVLTGMFAARRDGVARRGQLRAGTALIARGEFSLIIIGLVGASIPA
VAALATAYVFIMAVAGPVLARYTGGPVATTA
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_1309--100% (381)membrane transporter
M. marinum MMMAR_3635-1e-0922.28% (404) integral membrane ion antiporter
M. marinum MMMAR_2583-1e-0723.66% (393) sodium/hydrogen exchanger (antiporter)

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3264c-1e-17483.20% (381) integral membrane transport protein
M. gilvum PYR-GCKMflv_0160-9e-0723.26% (331) potassium/proton antiporter
M. tuberculosis H37RvRv3236c-1e-17483.20% (381) integral membrane transport protein
M. leprae Br4923MLBr_00782-1e-17280.31% (381) putative transmembrane transport protein
M. abscessus ATCC 19977MAB_2285-7e-1424.75% (408) Na+/H+ antiporter
M. avium 104MAV_4198-1e-16578.22% (381) transporter, monovalent cation:proton antiporter-2 (CPA2)
M. smegmatis MC2 155MSMEG_3664-1e-15073.75% (381) transporter, monovalent cation:proton antiporter-2 (CPA2)
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_2572-0.099.48% (381) membrane transporter
M. vanbaalenii PYR-1Mvan_1424-4e-1925.33% (379) sodium/hydrogen exchanger

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_1309|M.marinum_M               -------------MEVSRALLFEVGALLTTLALLGAIARRFALSPIPVYL
MUL_2572|M.ulcerans_Agy99           -------------MEVSRALLFEVGALLTTLALLGAIARRFALSPIPVYL
Mb3264c|M.bovis_AF2122/97           -------------MEVSRALLFELGVLLAVLAVLGAVARRFALSPIPVYL
Rv3236c|M.tuberculosis_H37Rv        -------------MEVSRALLFELGVLLAVLAVLGAVARRFALSPIPVYL
MLBr_00782|M.leprae_Br4923          -------------MEISGALLSQVGALLTTLAVLGAGARRYSLSPIPVYL
MAV_4198|M.avium_104                -------------MQISGTLLLQLGALLATLAVLGAAARRFALSPIPVYL
MSMEG_3664|M.smegmatis_MC2_155      -------------MEVSGALLLELGVILVALTVLGTAARRFALSPIPLYL
MAB_2285|M.abscessus_ATCC_1997      MSNTAVTAAAALSKDVSLIFFADLVILLVAALACGAVAGKIGLPKMVGEI
Mvan_1424|M.vanbaalenii_PYR-1       ---------------MDGHLFPTIAIILALATAAGVVATRLRQPLIVAFI
Mflv_0160|M.gilvum_PYR-GCK          -----------MTLHQLYVALFLGGLVLLASIAATRLATGVGLPSLLLFL
                                                        :     :*         *     . :   :

MMAR_1309|M.marinum_M               LAGLSLG-----------KGGVLP-VAAADDFVATGAPIGIVLLLLTLGL
MUL_2572|M.ulcerans_Agy99           LAGLSLG-----------KGGVLP-VAAADDFVATGAPIGIVLLLLTLGL
Mb3264c|M.bovis_AF2122/97           LAGLSLG-----------NGGILG-VAAAGEFIATGAPIGVVLLLLALGL
Rv3236c|M.tuberculosis_H37Rv        LAGLSLG-----------NGGILG-VAAAGEFIATGAPIGVVLLLLALGL
MLBr_00782|M.leprae_Br4923          MAGLSLG-----------KGGIMP-VSAADEFITTGAPIGIVLLLLTLGL
MAV_4198|M.avium_104                LAGLALG-----------KGGLLP-LATGGQFITTSAPIGVVLLLLTLGC
MSMEG_3664|M.smegmatis_MC2_155      VAGLALG-----------EGGLAP-VPATVEFVNTGASIGVVLLLLTLGL
MAB_2285|M.abscessus_ATCC_1997      AAGVLLGPTVFGRLFPETKDALFPSAGTGSEIISGLCLLAVVLLVGVAGM
Mvan_1424|M.vanbaalenii_PYR-1       MVGVAVG-------------PVGAGWVSADSTMELLARLGLAVLLFLVGL
Mflv_0160|M.gilvum_PYR-GCK          GVGVLVG------------EGGLGLQFDNAQLGQDLGTAALAVILVEGGL
                                     .*: :*                       .        .:.:::   * 

MMAR_1309|M.marinum_M               EFSATEFASSLRHHMPSAMVDIVLN-ATPGAVAGWLLGLDG--------V
MUL_2572|M.ulcerans_Agy99           EFSATEFASSLRHHMPSAMVDIVLN-ATPGAVAGWLLGLDG--------V
Mb3264c|M.bovis_AF2122/97           EFSATEFASSLRHHLPSAGVDIVLN-ATPGAVAGWLLGLDG--------V
Rv3236c|M.tuberculosis_H37Rv        EFSATEFASSLRHHLPSAGVDIVLN-ATPGAVAGWLLGLDG--------V
MLBr_00782|M.leprae_Br4923          EFSATEFASSLRRHLPSAGVDIILN-ATPGAVAGWLLGLDG--------V
MAV_4198|M.avium_104                EFSVAEFSSSMRHHLPSAAVDVVLN-AAPGAIAGWLLGLDG--------V
MSMEG_3664|M.smegmatis_MC2_155      EFSIGEFASSLRRHLPSAWIDLVLN-ALPGAIAGWLLDLGA--------V
MAB_2285|M.abscessus_ATCC_1997      HVDVDKLKQRLAGIATISVLGLAVP-LAGGMAVGYLVPEPLRPAAVDRTV
Mvan_1424|M.vanbaalenii_PYR-1       RLDLHMIRNTGPVAVITGLGQVLVT-FALGLLIALALGMDN--------V
Mflv_0160|M.gilvum_PYR-GCK          TTRFSDIRKVLAPAAVLATLGVAVSTLVTAAAVHWLLGMNW--------Q
                                          : .        .   : :     .      :             

MMAR_1309|M.marinum_M               AILALAGVTYISSSGVVARLLEDLRRLGNRETPAVLSVLVLEDFAMAGYL
MUL_2572|M.ulcerans_Agy99           AILALAGVTYISSSGVVARLLEDLRRLGNRETPAVLSVLVLEDFAMAGYL
Mb3264c|M.bovis_AF2122/97           AILGLAGVTYISSSGVIARLLEDLRRLGNRETPAVLSVLVLEDFAMAAYL
Rv3236c|M.tuberculosis_H37Rv        AILGLAGVTYISSSGVIARLLEDLRRLGNRETPAVLSVLVLEDFAMAAYL
MLBr_00782|M.leprae_Br4923          AVLALAGVTYISSSGVIARLLADLRRLGNRETPAVLSVLVLEDFAMAAYL
MAV_4198|M.avium_104                AILCLAGVTYISSSGVVARLLEDLRRLGNRETPAVLSVLVLEDFAMAAYL
MSMEG_3664|M.smegmatis_MC2_155      GILALAGVTYISSSGVIARLLGDLRRLGNRETPAVLSILVLEDFAMAAYL
MAB_2285|M.abscessus_ATCC_1997      FALFLGTAVAVSAIPVIARILMDLGLASHEIAQVILAAAIVDDVAGWLLL
Mvan_1424|M.vanbaalenii_PYR-1       TALYVAVALTFSSTIIIVKLLSDKRELEQLHGRIALGILIVQDIVVVVVM
Mflv_0160|M.gilvum_PYR-GCK          LALLLGAVISSTDAAAVFSVLR-VVPLPRRLSGLLEAESGFNDAPAVILV
                                      * :. .   :    :  :*       .       .   .:*      :

MMAR_1309|M.marinum_M               PLFTVLALH--GDWLHALGGTLAAIAALLGAFAASFY--WGHHFGRLFAH
MUL_2572|M.ulcerans_Agy99           PLFTVLALH--GDWLHALGGTLAAIAALLGAFAASFY--WGHHFGRLFAH
Mb3264c|M.bovis_AF2122/97           PLFAVLATD--GSWLEAVVGMTVAIAALLGAFAASYR--WGHHVGRLVTH
Rv3236c|M.tuberculosis_H37Rv        PLFAVLATD--GSWLEAVVGMTVAIAALLGAFAASYR--WGHHVGRLVTH
MLBr_00782|M.leprae_Br4923          PLFAVLAAG--GSWLDAVVGMIVAVCALFAAFAASYH--WGHHVGRLVAH
MAV_4198|M.avium_104                PLFAVLASG--GGWLHAVVGMVVAVSALVAAFAASYR--WGHHVQRLVEH
MSMEG_3664|M.smegmatis_MC2_155      PLLAVLAAG--GTLLHALLGMAVAIAALVVAFVVSYR--WGHHVTRFVSH
MAB_2285|M.abscessus_ATCC_1997      SAVTGMASDS-GTGGVAVLKMAVAAIVAVVALTALTRPALRNRLARRCSR
Mvan_1424|M.vanbaalenii_PYR-1       IALTASGRGGEGSVGAGIAAVALKGIGLLATLWVLMR--FVLPWLMPQIA
Mflv_0160|M.gilvum_PYR-GCK          MLFSVVPME---LNAVDIVGTLVYELGIGTVLGLGFG-VLGAMTLRRIAL
                                      .:             :            .:                  

MMAR_1309|M.marinum_M               PDSEQLLLRVLGITLMVAALAETLHASAAVGAFLVGLTLTGETAER---A
MUL_2572|M.ulcerans_Agy99           PDSEQLLLRVLGITLMVAALAETLHASAAVGAFLVGLTLTGETAER---A
Mb3264c|M.bovis_AF2122/97           PDSEQLLLRVLGITLIVAAVAESLHASAAVGAFLVGLTLTGETADR---A
Rv3236c|M.tuberculosis_H37Rv        PDSEQLLLRVLGITLIVAAVAESLHASAAVGAFLVGLTLTGETADR---A
MLBr_00782|M.leprae_Br4923          PDSEQLLLRVLGVTLIVAAVAESLHASAAVGAFLVGLTLTGDTAER---A
MAV_4198|M.avium_104                PDSEQLMLRVLGITLIVAAMAESLHASAAVGAFLVGLTLTGETATR---T
MSMEG_3664|M.smegmatis_MC2_155      PDNEQLLLRVLGLTLIVAALAEFIHASAAVGAFLVGLTLTGDSAHR---A
MAB_2285|M.abscessus_ATCC_1997      WSAPTSTTVTVATIIVCATAGQLLGFEPVIGAFFAGILVIAATPAGSRVH
Mvan_1424|M.vanbaalenii_PYR-1       RSQELLVLFGVAYAVSVASFSEWLGFSSEVGAFLAGVSLAGTQFRD--AL
Mflv_0160|M.gilvum_PYR-GCK          PAAGLYPLATFGLGMLAFAAAGTAHGSGFLAAYLASVVLANSGLPHRSAT
                                              ..  :   : .     .  :.*::..: :           

MMAR_1309|M.marinum_M               RRVLGPLRDLFAAIFFLGIGLSVAPKELIP--ALPVAMVLAVVTAATKVL
MUL_2572|M.ulcerans_Agy99           RRVLGPLRDLFAAIFFLGIGLSVAPKELIP--ALPVAILLAVVTAATKVL
Mb3264c|M.bovis_AF2122/97           RMVLTPLRDLFATIFFLGIGLSVDPGKLVS--MLPVALALAAVTAATKVA
Rv3236c|M.tuberculosis_H37Rv        RMVLTPLRDLFATIFFLGIGLSVDPGKLVS--MLPVALALAAVTAATKVA
MLBr_00782|M.leprae_Br4923          RKVLGPLRDLFAAIFFLAIGISVDPHKLLP--MFPTALILATVTAVTKVA
MAV_4198|M.avium_104                RQVLAPLRDLFAAIFFLAIGYSVDPHELIP--MLPAALILAAATAATKVA
MSMEG_3664|M.smegmatis_MC2_155      RLVLSPLRDLFAAIFFLAIGLSVHPSDLIP--MLPAAFVLAVVTAGTKVL
MAB_2285|M.abscessus_ATCC_1997      KPLHAMAVAFFGPIFFATIGLQLDLGRLLSGPVLALTASICVVAVFSKFL
Mvan_1424|M.vanbaalenii_PYR-1       GARLVSLRDFLLFFFFLNLGAGLDFSEAAG--QITAAIILSVFVLVAKPA
Mflv_0160|M.gilvum_PYR-GCK          RSFAEGAGWLAQIGVFVILGLLVSPDQLLD-EVVPAIVAGLALLLLARPI
                                             :    .*  :*  :          ..      .    ::  

MMAR_1309|M.marinum_M               TGMFAARRDGVARRGQLRAGTALIARGEFSLIIIGLVG----ASIPAVAA
MUL_2572|M.ulcerans_Agy99           TGMFAARRDGVARRGQLRAGTALIARGEFSLIIIGLVG----ASIPAVAA
Mb3264c|M.bovis_AF2122/97           TGMFAARREGVARRGQLRAGTALVARGEFSLIIIGLAG----ASIPGVAA
Rv3236c|M.tuberculosis_H37Rv        TGMFAARREGVARRGQLRAGTALVARGEFSLIIIGLAG----ASIPGVAA
MLBr_00782|M.leprae_Br4923          TGILAARYDGVARRGQLRAGTALVARGEFSLIIIGLVG----TSTPAVAA
MAV_4198|M.avium_104                TGIFAARHDGVARRGQLRAGTALIARGEFSLIIIGLAG----SSLPAVAA
MSMEG_3664|M.smegmatis_MC2_155      TGQFAARRDGVARAGQLRAGTALIARGEFSLVIIGLVG----QTYERLEA
MAB_2285|M.abscessus_ATCC_1997      GAGMGARISGFSWPESVAVGAGLNTRGVIQIVIAMVGVRCGVFSPEVFTA
Mvan_1424|M.vanbaalenii_PYR-1       IVIAIMSVMRYPVRVGFLVGLPLAQISEFSLILAALGLSLGHISNATVSL
Mflv_0160|M.gilvum_PYR-GCK          SVFLSLIGFRVPWREKMFLSWAGLRGAVPIVLCTYPIVAGVPDSWRLLHI
                                               .    .  .      .   ::           :   .  

MMAR_1309|M.marinum_M               LATAYVFIMAVAG-------------------------------------
MUL_2572|M.ulcerans_Agy99           LATAYVFIMAVAG-------------------------------------
Mb3264c|M.bovis_AF2122/97           LATAYVFVMAIVG-------------------------------------
Rv3236c|M.tuberculosis_H37Rv        LATAYVFVMAIVG-------------------------------------
MLBr_00782|M.leprae_Br4923          LATAYVFIMAIAG-------------------------------------
MAV_4198|M.avium_104                LATSYVFIMAIAG-------------------------------------
MSMEG_3664|M.smegmatis_MC2_155      IATPYVFILAIAG-------------------------------------
MAB_2285|M.abscessus_ATCC_1997      LVVTTIATTAIAG-------------------------------------
Mvan_1424|M.vanbaalenii_PYR-1       ITVVGLITIAASTYMTMYSDGIFARSQRWLSHLERKHQRDHEVAGLSDGD
Mflv_0160|M.gilvum_PYR-GCK          VFILVVLYTAIQG-------------------------------------
                                    :    :   *                                        

MMAR_1309|M.marinum_M               -------------PVLARYTGG--PVATTA--------------------
MUL_2572|M.ulcerans_Agy99           -------------PVLARYTGG--PVATTA--------------------
Mb3264c|M.bovis_AF2122/97           -------------PILARYTGGGLPAAAVASN------------------
Rv3236c|M.tuberculosis_H37Rv        -------------PILARYTGGGLPAAAVASN------------------
MLBr_00782|M.leprae_Br4923          -------------PVLARYTPGSLPTSSGSAN------------------
MAV_4198|M.avium_104                -------------PVLARYTGPR-PAAPAT--------------------
MSMEG_3664|M.smegmatis_MC2_155      -------------PVLTRYLGAR-PVVRT---------------------
MAB_2285|M.abscessus_ATCC_1997      -------------PVLKRTLTPRRQLPAVISKPPQEPALNR---------
Mvan_1424|M.vanbaalenii_PYR-1       FDIILFGLGRFGSHLADRLSGAGHRVLGVDFDPHGVRAHRRDGVTTTFGS
Mflv_0160|M.gilvum_PYR-GCK          -------------PSLRRVAEWLNLIPRDTTREIQVDAAPLDVLG-----
                                                     *                                

MMAR_1309|M.marinum_M               --------------------------------------------------
MUL_2572|M.ulcerans_Agy99           --------------------------------------------------
Mb3264c|M.bovis_AF2122/97           --------------------------------------------------
Rv3236c|M.tuberculosis_H37Rv        --------------------------------------------------
MLBr_00782|M.leprae_Br4923          --------------------------------------------------
MAV_4198|M.avium_104                --------------------------------------------------
MSMEG_3664|M.smegmatis_MC2_155      --------------------------------------------------
MAB_2285|M.abscessus_ATCC_1997      --------------------------------------------------
Mvan_1424|M.vanbaalenii_PYR-1       AEDLDLLEALPLDRAKYVISAIPVLQTNLALLHGLRQHQFSGAVALTAHT
Mflv_0160|M.gilvum_PYR-GCK          -AELLTMTVLPGSRLHNVTVLELRLPDPSVITLIIRDGQSFVPQPVTRLQ
                                                                                      

MMAR_1309|M.marinum_M               --------------------------------------------------
MUL_2572|M.ulcerans_Agy99           --------------------------------------------------
Mb3264c|M.bovis_AF2122/97           --------------------------------------------------
Rv3236c|M.tuberculosis_H37Rv        --------------------------------------------------
MLBr_00782|M.leprae_Br4923          --------------------------------------------------
MAV_4198|M.avium_104                --------------------------------------------------
MSMEG_3664|M.smegmatis_MC2_155      --------------------------------------------------
MAB_2285|M.abscessus_ATCC_1997      --------------------------------------------------
Mvan_1424|M.vanbaalenii_PYR-1       RHDAERLRATGVEIVIEPFSSAAHTTSNTLHDLLTTEFEDTDDEGYSDDE
Mflv_0160|M.gilvum_PYR-GCK          IGDELLIVTTSVTRDQAERRLRAVSRRGKLAYWFDEYGDPA---------
                                                                                      

MMAR_1309|M.marinum_M               ---------
MUL_2572|M.ulcerans_Agy99           ---------
Mb3264c|M.bovis_AF2122/97           ---------
Rv3236c|M.tuberculosis_H37Rv        ---------
MLBr_00782|M.leprae_Br4923          ---------
MAV_4198|M.avium_104                ---------
MSMEG_3664|M.smegmatis_MC2_155      ---------
MAB_2285|M.abscessus_ATCC_1997      ---------
Mvan_1424|M.vanbaalenii_PYR-1       GGAQPRPSR
Mflv_0160|M.gilvum_PYR-GCK          ---------