For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VEDQQPAAGDLTDAVSDGETEAAAAASDDEAQPDEAVQTPAAEAEPAEGAADDEATTDSVEDTGEASADS TDPDTDADADADAEADGAKGKAAARRARPKRLTGRRLAAVGAAITALLFVGSAAFAGAAVQPYLADRAVV AIKLNVARTAANAITTLWTYNPENMDGLPDRAATYLSGDFGAQYRKFVDTIVAPNKQAKITNNTEVTGVA VESLDGPNAIAIVYTNTTTTSPLTKNIPSMKYLSYRLIMKRDRSRWFVTRMTTITSLDLTPRV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_0421 | - | - | 100% (273) | Mce associated membrane protein |
M. marinum M | MMAR_3995 | - | 1e-14 | 26.99% (226) | hypothetical protein MMAR_3995 |
M. marinum M | MMAR_4045 | - | 4e-13 | 23.77% (244) | hypothetical protein MMAR_4045 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0184 | - | 4e-78 | 59.64% (275) | mce associated membrane protein |
M. gilvum PYR-GCK | Mflv_0702 | - | 9e-64 | 43.61% (321) | hypothetical protein Mflv_0702 |
M. tuberculosis H37Rv | Rv0178 | - | 4e-78 | 59.64% (275) | mce associated membrane protein |
M. leprae Br4923 | MLBr_02598 | - | 1e-74 | 79.77% (173) | putative secreted protein |
M. abscessus ATCC 19977 | MAB_4593c | - | 4e-10 | 23.85% (260) | hypothetical protein MAB_4593c |
M. avium 104 | MAV_5006 | - | 1e-83 | 62.37% (279) | hypothetical protein MAV_5006 |
M. smegmatis MC2 155 | MSMEG_0143 | - | 3e-57 | 43.01% (279) | mce associated membrane protein |
M. thermoresistible (build 8) | TH_2075 | - | 6e-41 | 63.25% (117) | PROBABLE CONSERVED MCE ASSOCIATED MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_1071 | - | 1e-142 | 95.97% (273) | Mce associated membrane protein |
M. vanbaalenii PYR-1 | Mvan_0143 | - | 9e-65 | 48.01% (277) | hypothetical protein Mvan_0143 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0702|M.gilvum_PYR-GCK MEDQQPGSGDLTADAPAARPRRRFFGRRPKSADVEPVADTAVEDVAETVA Mvan_0143|M.vanbaalenii_PYR-1 MEDQQPDPGDLT---------------------------TEVED------ MSMEG_0143|M.smegmatis_MC2_155 MEDQPADSGDLTTPARRRRWG----------FPLRRRQAEPAEQSDATGE TH_2075|M.thermoresistible__bu -------------------------------------------------- MMAR_0421|M.marinum_M MEDQQPAAGDLTDAV----------------------------------- MUL_1071|M.ulcerans_Agy99 MEDQQPAAGDLTDAV----------------------------------- MLBr_02598|M.leprae_Br4923 -------------------------------------------------- MAV_5006|M.avium_104 MEDQQPAAGDLT-------------------------------------- Mb0184|M.bovis_AF2122/97 MEDQQSASGDLT-------------------------------------- Rv0178|M.tuberculosis_H37Rv MEDQQSASGDLT-------------------------------------- MAB_4593c|M.abscessus_ATCC_199 MADDAADKDAKN-------------------------------------- Mflv_0702|M.gilvum_PYR-GCK EDAPKRPMGKGARAKAAVSENAETAPDLEAETPAAEADPAPADSEASEDE Mvan_0143|M.vanbaalenii_PYR-1 ---PKVPVGKSRRTPKAQPQ--TQAPEADAEADAEPETDAEPDAEP-ETE MSMEG_0143|M.smegmatis_MC2_155 GTEPSTEAGNESDAETKPRPVGKRQRTALSTGEQTAEDQTEETAGAAAYE TH_2075|M.thermoresistible__bu -------------------------------------------------- MMAR_0421|M.marinum_M SDGETEAAAAASDDEAQPDEAVQTPAAEAEPAEGAADDEATTDSVEDTGE MUL_1071|M.ulcerans_Agy99 SDGETEAAAAASDDEAQPDEAVQTPAAGAEPAEGAADDEATTDSVEDTGE MLBr_02598|M.leprae_Br4923 -------------------------------------------------- MAV_5006|M.avium_104 ----AEENPAADQNEA----TVAAAGDDRENGDAATESEAAKTSDAAPAD Mb0184|M.bovis_AF2122/97 ----QKSVANGESTDT----ASAATEGHRGEIDAAGEPDER-------GA Rv0178|M.tuberculosis_H37Rv ----QKSVANGESTDT----ASAATEGHRGEIDAAGEPDER-------GA MAB_4593c|M.abscessus_ATCC_199 ---ADESAVTSDAEKAESSAPSSAAVESTAEGTTEAATAEVADFDAEDSE Mflv_0702|M.gilvum_PYR-GCK STPEVSEPEATEPQAEAEVEADPEPEP-VVMVP-HRPAGRGVLIA-TAVA Mvan_0143|M.vanbaalenii_PYR-1 GSADAEDTDDTDLP-----DPAPEPEP-VVLVP-HRPAGRKLVIA-AAVA MSMEG_0143|M.smegmatis_MC2_155 KPTETEESEVSEPVAADEPADEDQPTQNIVFAP-FRPAGKGLTYA-AIAA TH_2075|M.thermoresistible__bu -------------------------------------------------- MMAR_0421|M.marinum_M ASADSTDPDTDADADADAEADGAKGKAAARRARPKRLTGRRLAAVGAAIT MUL_1071|M.ulcerans_Agy99 ASADSTDPDT------DAEADGAKGKAAAR---PKRLTGRRLAAVGAAIT MLBr_02598|M.leprae_Br4923 -------------------MAAAEGGGSWR----NRRAGQRTAIA-VVVA MAV_5006|M.avium_104 GAEDSHSAET------VETAGAAPAAGRRT----KRLAGKAWAVA-AMVA Mb0184|M.bovis_AF2122/97 AVADSQADED------DSAATAARGGKTRA----RRSRGRRLAIT-VGVA Rv0178|M.tuberculosis_H37Rv AVADSQADED------DSAATAARGGKTRA----RRSRGRRLAIT-VGVA MAB_4593c|M.abscessus_ATCC_199 KTKDSGAVEDS-----DDEDISLEPDEEEN---PKRIRGRHWALTAAAIV Mflv_0702|M.gilvum_PYR-GCK SVVFVGASGFAAAMAQPYLSERALVQTKLTIARTATDAITTLWSYTPEDM Mvan_0143|M.vanbaalenii_PYR-1 SAVFVGASGFAAAMVQPYLVQRALVETKLNIARTATDAITTLWTYTPDDM MSMEG_0143|M.smegmatis_MC2_155 ATLFVAAGAFAGATVWPYLSDRALVDTKVQVAQTSADAITTLWTYTPENI TH_2075|M.thermoresistible__bu -----------------------------------------LWTYTPEDM MMAR_0421|M.marinum_M ALLFVGSAAFAGAAVQPYLADRAVVAIKLNVARTAANAITTLWTYNPENM MUL_1071|M.ulcerans_Agy99 ALLFVGSAAFAGAAVQPYLADRAVVAIKLNVARTAANAITTLWSYNPENM MLBr_02598|M.leprae_Br4923 AVLFVGSAAFAGAAVQPYLADRATVAVKLEVARTAANAITVLWTYTPENM MAV_5006|M.avium_104 ALLFVGSAGFAGAMVQPYLADRAVAATKLKVARTAANAITTLWTYTPENM Mb0184|M.bovis_AF2122/97 AALFVGSAAFAGATVEPYLSERAVVATKLMVARTAANAITTLWTYTPENM Rv0178|M.tuberculosis_H37Rv AALFVGSAAFAGATVEPYLSERAVVATKLMVARTAANAITTLWTYTPENM MAB_4593c|M.abscessus_ATCC_199 AIAIVALAAIIGRLYEEQRIEEQSSREALAAAQEFAN---VMINVDSAKL : . . .: Mflv_0702|M.gilvum_PYR-GCK SSLAERASAYLTGDFAAEYRRYIDAIVEANKQAQVTNTTQVMGAAVESVS Mvan_0143|M.vanbaalenii_PYR-1 ATLADRASAYLDGDFAAEYRRYIDAIVEPNKQAQVTNTTQVMGAAVESVS MSMEG_0143|M.smegmatis_MC2_155 DTLPDRASRFLSNDFAAEYRQFIDSIVPSNKQAQITNNTQVVGTAVESIS TH_2075|M.thermoresistible__bu EDLPNRADKYLSGDFSDQYRRFIDAIVVSNKQSQVTNNTEVVGTAVESIS MMAR_0421|M.marinum_M DGLPDRAATYLSGDFGAQYRKFVDTIVAPNKQAKITNNTEVTGVAVESLD MUL_1071|M.ulcerans_Agy99 DGLPDRAATYLSGDFGAQYRKFVDTIVAPNKQAKITNNTEVTGVAVESLD MLBr_02598|M.leprae_Br4923 DTLADRAATYVSGDFGAQYRKFVDAIVGPNKQAKITNSTEVTGVAVESLD MAV_5006|M.avium_104 DTLADRASAYLSGDFEAQYRKFVDAIVAPNKQAKITNHTDVTGAAVESLD Mb0184|M.bovis_AF2122/97 DTLADRAANYLSGDFAAQYRRFVDQIAAANKQAKITNDTEVTGAAVESLS Rv0178|M.tuberculosis_H37Rv DTLADRAANYLSGDFAAQYRRFVDQIAAANKQAKITNDTEVTGAAVESLS MAB_4593c|M.abscessus_ATCC_199 DESSNKTLERSTGDFKQKYSESSTTLRQVMIENKAKATGVVVDSAVKSAA .::: .** :* . : : : . * . **:* Mflv_0702|M.gilvum_PYR-GCK PPSIPTEATALVYTNSVATSPVTKNIPSLRYLSYRLTMNRDGGEWRITRM Mvan_0143|M.vanbaalenii_PYR-1 PPTTPTEATALVYTNSVATSPVTKNIPSLRYLSYRLSLQRDGGDWRIVRM MSMEG_0143|M.smegmatis_MC2_155 ----ANEATAIVYTNSVSTSPVTKNVPSLRYLSYRLTLVRSDGDWRITQM TH_2075|M.thermoresistible__bu ----PTEATAIVYTNSVATSPVTKNIPSLRYLSYRLTMERKNSEWLINRM MMAR_0421|M.marinum_M ----GPNAIAIVYTNTTTTSPLTKNIPSMKYLSYRLIMKRDRSRWFVTRM MUL_1071|M.ulcerans_Agy99 ----GPNAIAIVYTNTTTTSPLTKNIPSMKYLSYRLIMKRDRSRWFVTRM MLBr_02598|M.leprae_Br4923 ----ASNAIAIVYTNTTSTSPLTKNIPALKYLSYRLFMKRSAVRWLVTRM MAV_5006|M.avium_104 ----DTNAVVIVYTNTTSTSPLTKNVPSLKYLSYRLFMKRAKSRWLVTRM Mb0184|M.bovis_AF2122/97 ----GRDAVAIVYTNTTTTSPVTKNIPALKYLSYRLFMKRYDARWLVTRM Rv0178|M.tuberculosis_H37Rv ----GRDAVAIVYTNTTTTSPVTKNIPALKYLSYRLFMKRYDARWLVTRM MAB_4593c|M.abscessus_ATCC_199 -----PDKVEVLLFIDQAVSNVAIPDARMDRSRVQITMQKVDGRWLAS-- : :: :.* :: . : :: : : * Mflv_0702|M.gilvum_PYR-GCK STITSFDLTPQL Mvan_0143|M.vanbaalenii_PYR-1 STITSFDLTPQL MSMEG_0143|M.smegmatis_MC2_155 PALTQLDLSPQL TH_2075|M.thermoresistible__bu TAITQLDLTPQL MMAR_0421|M.marinum_M TTITSLDLTPRV MUL_1071|M.ulcerans_Agy99 TTITSLDLTPRV MLBr_02598|M.leprae_Br4923 TTITSLDLTPQL MAV_5006|M.avium_104 TTITSLDLTPKV Mb0184|M.bovis_AF2122/97 TTITSLDLTPQV Rv0178|M.tuberculosis_H37Rv TTITSLDLTPQV MAB_4593c|M.abscessus_ATCC_199 ----DVELT--- ..:*: