For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_0171 (-)

annotation: ATP-binding protein ABC transporter
coordinates: 202409 - 203383
length: 324

MSSPESKTDNETGDSQPGTSALEAVDLVKSYPGSDANAVDGLNLVIPRGVVYCLLGRNGAGKTTTIRMAT
TLLTPTSGQLEVLGVPVDNTTQLRPLIGVALQEVALDLWMSPVEQIRMSLAMAGWPKSDRKRREGELVEQ
FGLGKYLNRKVGALSGGMRRRVDVALAVAHNPQMLFLDEPSSGLDIEGKQEVWNAIRLLRSEGRTVVLTT
HDMDEAVSLADEVGIIKDGVLVAAGSTQEFTRSHGFAVDISAPQEITDDAVRQLAGAGYPMQRKGSSAVT
GSLDSASASEIGSLATVLDRLGLAGANIEIRSTSLRDAFLEATQ
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_0171--100% (324)ATP-binding protein ABC transporter
M. marinum MMMAR_3263-6e-4336.04% (308) ATP-binding protein ABC transporter
M. marinum MMMAR_1771drrA4e-3432.32% (297) daunorubicin-DIM-transport ATP-binding protein ABC

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2961drrA7e-3732.23% (301) daunorubicin-DIM-transport ATP-binding protein ABC
M. gilvum PYR-GCKMflv_1936-2e-4236.66% (311) daunorubicin resistance ABC transporter ATPase subunit
M. tuberculosis H37RvRv2936drrA5e-3631.89% (301) daunorubicin-DIM-transport ATP-binding protein ABC
M. leprae Br4923MLBr_02352-1e-3532.12% (302) putative antibiotic resistance efflux protein
M. abscessus ATCC 19977MAB_1689-1e-13679.61% (304) daunorubicin resistance ABC transporter ATP-binding subunit
M. avium 104MAV_3250-9e-4436.04% (308) daunorubicin resistance ATP-binding protein DrrA
M. smegmatis MC2 155MSMEG_6766-7e-3640.44% (225) ABC transporter, ATP-binding protein, NodI family protein
M. thermoresistible (build 8)TH_2788-2e-2833.45% (287) PUTATIVE ABC transporter ATP-binding protein
M. ulcerans Agy99MUL_4925-1e-18099.69% (324) ATP-binding protein ABC transporter
M. vanbaalenii PYR-1Mvan_4796-7e-4437.54% (309) daunorubicin resistance ABC transporter ATPase subunit

CLUSTAL 2.0.9 multiple sequence alignment


Mb2961|M.bovis_AF2122/97            ---------------MRNDDMAVVVNGVRKTYGK-GKIVALDDVSFKVRR
Rv2936|M.tuberculosis_H37Rv         ---------------MRNDDMAVVVNGVRKTYGK-GKIVALDDVSFKVRR
MLBr_02352|M.leprae_Br4923          ---------------MRNNDKAVMVRGVRKTYGK-GKIIALDDVSFDVDR
MAV_3250|M.avium_104                ---------------MSAP--AIEVEGLTKKFG--GSTLALAGVDFSVPA
Mflv_1936|M.gilvum_PYR-GCK          ----------------MPFPPAIEALDLVKRFG---DQTAVAGVSFVVPP
Mvan_4796|M.vanbaalenii_PYR-1       MADKSVGPMSVCAYTVDAMESAIEAIDLVKRFGDTLDNPAVDGVSFAVPP
MSMEG_6766|M.smegmatis_MC2_155      ------------------MSAAVEVRGLSKSYGR---RPAVRDLDLDVGY
TH_2788|M.thermoresistible__bu      -----------------MMAAMIELTALTKVFGR---TRAVDDLTCTVEP
MMAR_0171|M.marinum_M               -MSSPESKTDNETGDSQPGTSALEAVDLVKSYPG-SDANAVDGLNLVIPR
MUL_4925|M.ulcerans_Agy99           -MSSPESKTDNETGDSQPGTSALEAVDLVKSYPG-SDANAVDGLNLVIPR
MAB_1689|M.abscessus_ATCC_1997      -----------MTTDTQ--IPALRAAELVKAYPG-SDARAVDGLDLTIPQ
                                                          :    : * :       *: .:   :  

Mb2961|M.bovis_AF2122/97            GEVIGLLGPNGAGKTTMVDILSTLTRPDAGSAIIAGYDVVSEPAGVRRSI
Rv2936|M.tuberculosis_H37Rv         GEVIGLLGPNGAGKTTMVDILSTLTRPDAGSAIIAGYDVVSEPAGVRRSI
MLBr_02352|M.leprae_Br4923          GEVIGLLGPNGAGKTTMVDILSTLTRPDRGLATVAGYDVVSEPAGVRRSI
MAV_3250|M.avium_104                GTVCGLLGHNGAGKTTTINILSTLIRPTSGRARVAGYDVVRQPAEVRASI
Mflv_1936|M.gilvum_PYR-GCK          GTVLGLLGPNGAGKTTTVRMMTTLTEPTSGTARVAGFDVRTHPDEVRRHM
Mvan_4796|M.vanbaalenii_PYR-1       GTVLGLLGPNGAGKTTTVRMMTTLTEPTSGTARVAGYDVRAQPDDVRRHM
MSMEG_6766|M.smegmatis_MC2_155      GEIFAILGPNGAGKTTTVEILEGNRRRDSGEVLVLGEDPGRAGRQWRARI
TH_2788|M.thermoresistible__bu      GVVTGFLGPNGAGKTTTMRLILGLDRPTSGTATIDGRRYRDLRDPLR-TV
MMAR_0171|M.marinum_M               GVVYCLLGRNGAGKTTTIRMATTLLTPTSGQLEVLGVPVDN-TTQLRPLI
MUL_4925|M.ulcerans_Agy99           GVVYCLLGRNGAGKTTTIRMATTLLTPTSGQLEVLGVPVDN-TTQLRPLI
MAB_1689|M.abscessus_ATCC_1997      GIVYCLLGRNGAGKTTTIRMATTLLAPTRGELEVLGVPVDN-TKELRPLI
                                    * :  :** ******* : :         *   : *          *  :

Mb2961|M.bovis_AF2122/97            MVTGQQVAVDDALSGEQNLVLFGRLWGLSKSAARKRAAELLEQFSLVHAG
Rv2936|M.tuberculosis_H37Rv         MVTGQQVAVDDALSGEQNLVLFGRLWGLSKSAARKRAAELLEQFSLVHAG
MLBr_02352|M.leprae_Br4923          MVTGQQVAVDDQLSGEQNLILFGRLYGLSKSVARVRTQELLEQFDLLHAG
MAV_3250|M.avium_104                GMAGQFTGMDPMLTGRENLVLFGRLRGLNRRRAKARADELLEQFNLVDAA
Mflv_1936|M.gilvum_PYR-GCK          GLTGQVATVDELLTGRENIRMIGGLYGIRRRDLKNLGDQLLHQFSLTDAA
Mvan_4796|M.vanbaalenii_PYR-1       GLTGQVATVDELLTGRENIRMIGGLYGIRRKDLDRLGDQLLHQFSLTDAA
MSMEG_6766|M.smegmatis_MC2_155      GIVLQEVSDAGMLTVGETVQMFSACYGTAR-----APADVLELVGLRHAS
TH_2788|M.thermoresistible__bu      GALLDARAVHPARSARNHLRWLAAANRIPQR----RVDEVLELVGLTAVA
MMAR_0171|M.marinum_M               GVALQEVALDLWMSPVEQIRMSLAMAGWPKSDRKRREGELVEQFGLGKYL
MUL_4925|M.ulcerans_Agy99           GVALQEVALDLWMSPVEQIRMSLAMAGWPKSDRKRREGELVEQFGLGKYL
MAB_1689|M.abscessus_ATCC_1997      GVALQEVALDLWMSPVEQIRMSLAIAGWPKARRKAREDELVEQFGLSTYV
                                        :        :  : :          :        :::. ..*    

Mb2961|M.bovis_AF2122/97            KRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVA
Rv2936|M.tuberculosis_H37Rv         KRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVA
MLBr_02352|M.leprae_Br4923          KRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVA
MAV_3250|M.avium_104                DRRLSTYSGGMYRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVS
Mflv_1936|M.gilvum_PYR-GCK          DRPVRSYSGGMRRRLDLAVSLLASPPVLFLDEPTTGLDPRSRSELWDVLR
Mvan_4796|M.vanbaalenii_PYR-1       DRVVRSYSGGMRRRLDLAVSLLASPPVLFLDEPTTGLDPRSRSELWDVLR
MSMEG_6766|M.smegmatis_MC2_155      RSRVRTLSGGQRRRLDVALGIIGGPELVFLDEPTTGFDPEARQQFWELIR
TH_2788|M.thermoresistible__bu      ARPAGTLSLGMSQRLGIAGALLGDPPVLLFDEPVNGLDPEGIRWVRTLMR
MMAR_0171|M.marinum_M               NRKVGALSGGMRRRVDVALAVAHNPQMLFLDEPSSGLDIEGKQEVWNAIR
MUL_4925|M.ulcerans_Agy99           NRKVGALSGGMRRRVDVALAVAHNPQMLFLDEPSSGLDIEGKQEVWNAIR
MAB_1689|M.abscessus_ATCC_1997      NRKVGALSGGMRRRVDVALAVAHNPQMLFLDEPSSGLDIEGKQEVWNAIR
                                         : * *  :*:.:* .:   * : ::*** .*:* ..   .   : 

Mb2961|M.bovis_AF2122/97            SFKKLGIATLLTTQYLEEADALSDRIILIDHGIIIAEGTANELKHRAGDT
Rv2936|M.tuberculosis_H37Rv         SFKKLGIATLLTTQYLEEADALSDRIILIDHGIIIAEGTANELKHRAGDT
MLBr_02352|M.leprae_Br4923          SFKQIGIATLLTTQYLEEADELSDRIILIDHGTVIAEGTASELKHRVGET
MAV_3250|M.avium_104                SLRVQGISVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTS
Mflv_1936|M.gilvum_PYR-GCK          GLVAQGTTLLLTTQYLEEADQLADNIVVIDRGRIIAEGSPLHLKQQAGRA
Mvan_4796|M.vanbaalenii_PYR-1       GLVAQGTTLLLTTQYLEEADQLADNIVVIDRGHIIAEGSPLELKQQAGRA
MSMEG_6766|M.smegmatis_MC2_155      LLAADGTTIVLTTHYLEEAAALADRVAVIADGNVVAVDSPTRLTRHV-DT
TH_2788|M.thermoresistible__bu      TMAAEGRTVLVSSHLLAEMANTADRLLVIGRGRLIASTSVAEFVGSTAAE
MMAR_0171|M.marinum_M               LLRSEGRTVVLTTHDMDEAVSLADEVGIIKDGVLVAAGSTQEFTRSHGFA
MUL_4925|M.ulcerans_Agy99           LLRSEGRTVVLTTHDMDEAVLLADEVGIIKDGVLVAAGSTQEFTRSHGFA
MAB_1689|M.abscessus_ATCC_1997      LLRSEGRTVVLTTHDMDEAVSLADEVGIVKSGRLVASGSTQEFTRSHGYA
                                     :   * : ::::: : *    :* : ::  * ::*  :  .:       

Mb2961|M.bovis_AF2122/97            FCEIVPRDLKDLDAIVAALGSLLPEHHRAMLTPDSDRITMPAPDGIRMLV
Rv2936|M.tuberculosis_H37Rv         FCEIVPRDLKDLDAIVAALGSLLPEHHRAMLTPDSDRITMPAPDGIRMLV
MLBr_02352|M.leprae_Br4923          FCEIVPRDLKDLGTVVAALGSLLPERSRAMLTPTSDRITMPAPDGTQTLI
MAV_3250|M.avium_104                YCQVTPANPAELPQVAAALTGLEG----IEIDSDTGSVSVFAPDGVATLV
Mflv_1936|M.gilvum_PYR-GCK          SLVVTVADAADLESARGLLARTGAE---VYVDAGARRLTATA-DGLDDMV
Mvan_4796|M.vanbaalenii_PYR-1       SLVVTVGDAADLEGARTLLGQTGAE---VFVDAGARRLTASA-DGLDDMI
MSMEG_6766|M.smegmatis_MC2_155      AATVRWMEGGHVHEERTEFP-----------------------------T
TH_2788|M.thermoresistible__bu      RVRVRSPEMDTLRGLLADAGVEVR------LEPDGAALTVRG----AAPE
MMAR_0171|M.marinum_M               VDISAPQEITDDAVRQLAGAGYPMQ-----RKGSSAVTGSLDSASASEIG
MUL_4925|M.ulcerans_Agy99           VDISAPQEITDDAVRQLAGAGYPMQ-----RKGSSAVTGSLDSASASEIG
MAB_1689|M.abscessus_ATCC_1997      VEVSADSVIPEEAAGRLAEAGYALR-----RTDSGTLSGTLDSASAADLG
                                                                                      

Mb2961|M.bovis_AF2122/97            EAARRIDEARIELADIALRRPSLDDVFLAMTTDPTESLTHLVSGSAR
Rv2936|M.tuberculosis_H37Rv         EAARRIDEARIELADIALRRPSLDHVFLAMTTDPTESLTHLVSGSAR
MLBr_02352|M.leprae_Br4923          EAARRIDEVSVELADIALRRPSLDDVFLSMTTDPSESLSHLAAGAMR
MAV_3250|M.avium_104                EVFRRVDALGLELADISLRKPSLDEAFLHLTERT-------VARS--
Mflv_1936|M.gilvum_PYR-GCK          KVAGWLRDSGITVDDIGLSRPSLDDVFLMLTGHRTDDTEEVGA----
Mvan_4796|M.vanbaalenii_PYR-1       RVAEWLRDSGIAVDDIGLSRPSLDDVFLTLTGHRTEDSEEIGA----
MSMEG_6766|M.smegmatis_MC2_155      ELIRQRSRVGAELAQLTVTRPSLEDAYLHLIGRT-------------
TH_2788|M.thermoresistible__bu      VVGELAARNGITLHELSVQRASLEDAYLELTDAAVEYRAVPR-----
MMAR_0171|M.marinum_M               SLATVLDRLGLAGANIEIRSTSLRDAFLEATQ---------------
MUL_4925|M.ulcerans_Agy99           SLATVLDRLGLAGANIEIRSTSLRDAFLEATQ---------------
MAB_1689|M.abscessus_ATCC_1997      ALSAELDRVGLGAASIEVRSTSLRDAFLEVTQ---------------
                                                  .: :  .** ..:*