For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VAKMLRLPFGTPEFIDRIVTGGVNQVGRRTLRMLITTWDAAGGGPFAASAIASTGMAKTAEIVQGMFIGP VFGPLLRILGADKVAVRASLCASQLVGLGIMRYGIRSEPLHSMSVDAIVDAIGPTVQRYLVGDITR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_4902 | - | - | 100% (136) | hypothetical protein MAV_4902 |
| M. avium 104 | MAV_3088 | - | 3e-09 | 30.15% (136) | transcriptional regulator, TetR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0264c | - | 3e-64 | 84.56% (136) | hypothetical protein Mb0264c |
| M. gilvum PYR-GCK | Mflv_0253 | - | 3e-10 | 28.93% (121) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv0258c | - | 3e-64 | 84.56% (136) | hypothetical protein Rv0258c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2351c | - | 2e-06 | 25.55% (137) | TetR family transcriptional regulator |
| M. marinum M | MMAR_0518 | - | 8e-66 | 86.76% (136) | hypothetical protein MMAR_0518 |
| M. smegmatis MC2 155 | MSMEG_5282 | - | 1e-13 | 36.13% (119) | transcriptional regulator |
| M. thermoresistible (build 8) | TH_3542 | - | 2e-11 | 30.65% (124) | PUTATIVE transcriptional regulator, TetR family |
| M. ulcerans Agy99 | MUL_1181 | - | 6e-66 | 86.76% (136) | hypothetical protein MUL_1181 |
| M. vanbaalenii PYR-1 | Mvan_3298 | - | 3e-12 | 30.88% (136) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0518|M.marinum_M --------------------------MANNEEPSRGLLDPVAKMLRLPFG
MUL_1181|M.ulcerans_Agy99 --------------------------MANNEEPSRGLLDPVAKMLRLPFG
Mb0264c|M.bovis_AF2122/97 --------------------------MARSQEPSRGLLDPVAKMLRLPFG
Rv0258c|M.tuberculosis_H37Rv --------------------------MARSQEPSRGLLDPVAKMLRLPFG
MAV_4902|M.avium_104 ----------------------------------------MAKMLRLPFG
Mflv_0253|M.gilvum_PYR-GCK MPPPAQTGRRRGRRKGDPVSRETVLAAAKGRFARDGFEKTTLRAIAEDAG
TH_3542|M.thermoresistible__bu -----------------------VLAAAKRRFAQDGYEKTTLRAIARDAH
MAB_2351c|M.abscessus_ATCC_199 -MSS----KRPGRRPGTSSARDDILASARKLFSLNGIDKTSIRAIASDAG
Mvan_3298|M.vanbaalenii_PYR-1 -MTTNADRKRPGRPPGTSDTRDRILECARELFARNGITNTSIRSIAAGAG
MSMEG_5282|M.smegmatis_MC2_155 -MVKRSARATPGPRDDRGVLAARILAAARETFAESGWAGTTIRAVARAAD
: :
MMAR_0518|M.marinum_M TPEFIDKIVAGS--------------------------VNQVGRRTLYML
MUL_1181|M.ulcerans_Agy99 TPEFIDKIVAGS--------------------------VNQVGRRTLYML
Mb0264c|M.bovis_AF2122/97 TPDFIEKIVTGS--------------------------VNQVGRRTLYVL
Rv0258c|M.tuberculosis_H37Rv TPDFIEKIVTGS--------------------------VNQVGRRTLYVL
MAV_4902|M.avium_104 TPEFIDRIVTGG--------------------------VNQVGRRTLRML
Mflv_0253|M.gilvum_PYR-GCK VDASMVLYLFGSKEALFRESLRLILDPGVLIEALSGG-EADIGTRMVRAY
TH_3542|M.thermoresistible__bu VDASMVLYLFGSKAELFRESLELILDPEMLVAAMTGD-DGDVGTRMVRVY
MAB_2351c|M.abscessus_ATCC_199 VDPALVHHYFGTKLDLFREVVQLPVDPSVVLQPLRDVPVDELGVTIPRLI
Mvan_3298|M.vanbaalenii_PYR-1 VDPALVHHYFGTKTQLFAAAIEIPIDPMSIIGPLKEVPVDQLGRALPSLL
MSMEG_5282|M.smegmatis_MC2_155 VDPALVYHYYGSKEGLLDAATDPPQKWLDAVVATWQAPVGDTGRAVLRLL
. : * : *
MMAR_0518|M.marinum_M ITTWDAAGGGP-FAASAVASTGLAKTAEIVQSMFIGPIFNPLLKMLGAD-
MUL_1181|M.ulcerans_Agy99 ITTWDAAGGGP-FAASAVASTGLAKTAEIVQSMFIGPIFNPLLKMLGAD-
Mb0264c|M.bovis_AF2122/97 ITTWDAAGGGP-FAASAIATTGLAKTAEIVQSMFIGPVFNPLLKMLGAD-
Rv0258c|M.tuberculosis_H37Rv ITTWDAAGGGP-FAASAIATTGLAKTAEIVQSMFIGPVFNPLLKMLGAD-
MAV_4902|M.avium_104 ITTWDAAGGGP-FAASAIASTGMAKTAEIVQGMFIGPVFGPLLRILGAD-
Mflv_0253|M.gilvum_PYR-GCK LGVWESPESAESMRTMLASATSNPDAREAFRGFIQDYVLAAVVGTLGGD-
TH_3542|M.thermoresistible__bu LQIWESPDTGPTIRAMLQSATSNTDAREAFRSFLREYLLTAVSGVLGGG-
MAB_2351c|M.abscessus_ATCC_199 IALWDS-ELGANMLAVFRSALTGADD-GLVRVFFREVLVNIIAERVDSPP
Mvan_3298|M.vanbaalenii_PYR-1 LPLWDS-ELGKGFIATLRSILAGSDV-SMVRSFLQDLIATEVGGRVDDPP
MSMEG_5282|M.smegmatis_MC2_155 LDSWADDEVGPVLRAILQTAAHEPTTHEKLRKVVERSLIGVIATMGDDE-
: * . : : : . .: .. : : .
MMAR_0518|M.marinum_M -KIAVRASLCASQLVGLGIMRYGLRSEPMHSMSVDALVDAIGPTMQHYLV
MUL_1181|M.ulcerans_Agy99 -KIAVRASLCASQLVGLGIMRYGLRSEPMHSMSVDALVDAIGPTMQHYLV
Mb0264c|M.bovis_AF2122/97 -KIAIRASLCAAQLVGLGIMRYGVRSEPLHSMSVEMLVDAIGPTMQRYLV
Rv0258c|M.tuberculosis_H37Rv -KIAIRASLCAAQLVGLGIMRYGVRSEPLHSMSVEMLVDAIGPTMQRYLV
MAV_4902|M.avium_104 -KVAVRASLCASQLVGLGIMRYGIRSEPLHSMSVDAIVDAIGPTVQRYLV
Mflv_0253|M.gilvum_PYR-GCK DRARLRAMLAASSLVGTAMMRYLMEIPPLSELATEDVIRLVAPTVTRYLT
TH_3542|M.thermoresistible__bu EQARLRAELAATGLVGTAMLRYIMRVPPLAELSTEEVVRMLAPTVNRYLT
MAB_2351c|M.abscessus_ATCC_199 GSGVLRAEFAITQMAGILVGRYIMAIEPLASLTAEQIALTVGPNIQRYLT
Mvan_3298|M.vanbaalenii_PYR-1 GSGRVRVQFVASQLVGIVMARYILELEPFKSLPVEQIVDTVAPNLQRYLT
MSMEG_5282|M.smegmatis_MC2_155 RVRRTRAGLVASQTIGFALMRYVWRIEPVASMREDEVLDAVGPTLQRYID
*. : : * : ** *. .: : : :.*.: :*:
MMAR_0518|M.marinum_M GDISRG----------
MUL_1181|M.ulcerans_Agy99 GDISRG----------
Mb0264c|M.bovis_AF2122/97 GDIGRG----------
Rv0258c|M.tuberculosis_H37Rv GDIGRG----------
MAV_4902|M.avium_104 GDITR-----------
Mflv_0253|M.gilvum_PYR-GCK APADELGLPG------
TH_3542|M.thermoresistible__bu ADADELGLPSSLTAGS
MAB_2351c|M.abscessus_ATCC_199 GALPSITP--------
Mvan_3298|M.vanbaalenii_PYR-1 GELPQFSGD-------
MSMEG_5282|M.smegmatis_MC2_155 GDIGAAGQIRTGFDTA
.