For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SEHPTAGVGAPEEQTTQIPPAAAAGDDKKDAAEPQPEPGGDAPTKAFAGFRTERRVPEREPAPPTAPRPG GMPPWDSTPVTGIPRVDPTAYGAYYAGPDAPPTQIQGPPPRQEHLPHTPYPELSTGMLLRPVQPPPSEGW RLLLYKLSGGLINLGESPRAARYNNLVAQVNRPLRGSYRVAFLSLKGGVGKTTIAATLGATFASIRGDRV VAVDANPDRGTLSQKIPLETAATVRQLLHDAGTIERYSDVRRYTSKGPSGLEVLASETDPAVSEAFSADD YVRILDILERFYGLVLTDCGPGLLHSVMKSVLDKADALVVVSSASIDGARSASATLDWLDAHGHEDLVRN SIAVINGVRPRPGKVDMNKVIDHFSRRCRAVQLVPFDPHLEEGAEIDLDRLRRGTREALTELAAIVADGF PGAQRNPGVLG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_4615 | - | - | 100% (432) | hypothetical protein MAV_4615 |
M. avium 104 | MAV_3857 | - | 5e-51 | 35.28% (377) | hypothetical protein MAV_3857 |
M. avium 104 | MAV_0156 | - | 4e-43 | 34.10% (305) | hypothetical protein MAV_0156 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0543 | - | 1e-160 | 67.51% (434) | hypothetical protein Mb0543 |
M. gilvum PYR-GCK | Mflv_0048 | - | 1e-123 | 65.90% (349) | hypothetical protein Mflv_0048 |
M. tuberculosis H37Rv | Rv0530 | - | 1e-160 | 67.51% (434) | hypothetical protein Rv0530 |
M. leprae Br4923 | MLBr_00798 | - | 3e-51 | 35.49% (355) | hypothetical protein MLBr_00798 |
M. abscessus ATCC 19977 | MAB_3972c | - | 1e-133 | 65.71% (382) | hypothetical protein MAB_3972c |
M. marinum M | MMAR_0876 | - | 1e-166 | 69.18% (438) | hypothetical protein MMAR_0876 |
M. smegmatis MC2 155 | MSMEG_0975 | - | 1e-130 | 58.20% (445) | hypothetical protein MSMEG_0975 |
M. thermoresistible (build 8) | TH_0884 | - | 1e-124 | 71.38% (304) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_1004 | - | 2e-05 | 32.35% (102) | hypothetical protein MUL_1004 |
M. vanbaalenii PYR-1 | Mvan_0870 | - | 1e-123 | 69.94% (336) | hypothetical protein Mvan_0870 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0543|M.bovis_AF2122/97 -------------------------------------------------- Rv0530|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_0876|M.marinum_M -------------------------------------------------- MAV_4615|M.avium_104 -------------------------------------------------- MSMEG_0975|M.smegmatis_MC2_155 -------------------------------------------------- TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0048|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0870|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3972c|M.abscessus_ATCC_199 ----------------------------MSDYPAHRAPDGPSPYAADEAQ MLBr_00798|M.leprae_Br4923 MTTFRERRTMFDAAVASYQSGDKTSAGAAFARLTVENPDMSDSWLGRLAC MUL_1004|M.ulcerans_Agy99 -------------------------------------------------- Mb0543|M.bovis_AF2122/97 -----------------------------------------MLVTEHPRT Rv0530|M.tuberculosis_H37Rv -----------------------------------------MLVTEHPRT MMAR_0876|M.marinum_M -----------------------------------------MDVSDHPSA MAV_4615|M.avium_104 -------------------------------------------MSEHPTA MSMEG_0975|M.smegmatis_MC2_155 -------------------------------------------------- TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0048|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0870|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3972c|M.abscessus_ATCC_199 GGPTAPPWAAQEPAQPVMYGQSTPQQPHEMTQQFQAVPFQDPFAPQQDIA MLBr_00798|M.leprae_Br4923 GDHNLDTLAGAHQHSEVLYSETRRVGLKDGDLRAEIAAPMYLTLTTWSRA MUL_1004|M.ulcerans_Agy99 -------------------------------------------------- Mb0543|M.bovis_AF2122/97 GVGAPDS----GNGGTDHPTVQLPP-----------------------VP Rv0530|M.tuberculosis_H37Rv GVGAPDS----GNGGTDHPTVQLPP-----------------------VP MMAR_0876|M.marinum_M GVGASNAY--QGEGGKDHPTIQLPP-----------------------VP MAV_4615|M.avium_104 GVGAPEE-----------QTTQIPP-----------------------AA MSMEG_0975|M.smegmatis_MC2_155 -----------MSASSEHPVPDSVD-----------------------VP TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0048|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0870|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3972c|M.abscessus_ATCC_199 GLGHDPAVPSLNSLGGSFAPLDFTP-----------------------SG MLBr_00798|M.leprae_Br4923 TIGLAYASALINAGRYDEASVALDDPVVTEDDDAALARQFVMATLFHQTR MUL_1004|M.ulcerans_Agy99 -------------------------------------------------- Mb0543|M.bovis_AF2122/97 S-------VGAPPAAAGGETPTRSVAGFRTQR------------------ Rv0530|M.tuberculosis_H37Rv S-------VGAPPAAAGGETPTRSVAGFRTQR------------------ MMAR_0876|M.marinum_M HQ---PPQLGEPPVAGGSDAPTRAFAGFRTERRSAARAEGAEAPDVAQWE MAV_4615|M.avium_104 AAGDDKKDAAEPQPEPGGDAPTKAFAGFRTERRVPEREPAPPTAPRPGGM MSMEG_0975|M.smegmatis_MC2_155 AP------EHPAAETPEAPSVFAPVPGFRGQQRFSDPA-QAGVSTPLPAE TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0048|M.gilvum_PYR-GCK -------------------------MSFRAQQRFSDP------MAPVPAE Mvan_0870|M.vanbaalenii_PYR-1 ---------------------MDAPGSFRAQQRFSDP------MAPVPAE MAB_3972c|M.abscessus_ATCC_199 SQ------EAGDPTAVGAAGSSGGPGGFRADNRFSDSGEQPAQPTPFTAD MLBr_00798|M.leprae_Br4923 SWSNVLKVAEVPPQNSNTDDRNELTDAVAALASTAASNLGQFQFALELTE MUL_1004|M.ulcerans_Agy99 ---------MASTWSLSKGLAAVVVTSAAAFGLCPAAAADPAAPQPNPNP Mb0543|M.bovis_AF2122/97 -------------LDPTAYGAYYSGPDEGPASP--------------AER Rv0530|M.tuberculosis_H37Rv -------------LDPTAYGAYYSGPDEGPASP--------------AER MMAR_0876|M.marinum_M SGPDTGPVAGLPRVDPTAYGAYYNGPPEPPAEP--------------QYR MAV_4615|M.avium_104 PPWDSTPVTGIPRVDPTAYGAYYAGPDAPPTQI--------------QGP MSMEG_0975|M.smegmatis_MC2_155 -WTAPTPPHGIPVSAPQTAQTPPQNSHQPMASGLPPLPP---APLTPPAA TH_0884|M.thermoresistible__bu -------------------------------------------------- Mflv_0048|M.gilvum_PYR-GCK -WTAPTPPEGVVP------------------------------------V Mvan_0870|M.vanbaalenii_PYR-1 -WTAPTPPEGAPP------------------------------------V MAB_3972c|M.abscessus_ATCC_199 RWASDTPPSGIPQQAQQPPVGGSRYYTPVGGQ---------------QTG MLBr_00798|M.leprae_Br4923 RVSTTNPQVAADVALNRAWCLRELGDDNAARAALTAAPVNDIPTTHNTAE MUL_1004|M.ulcerans_Agy99 QLPGLPALAQLSPIIQQAAGNPEQATQLLMAAA----------------Q Mb0543|M.bovis_AF2122/97 PPYRLEPVPHTPYPELATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEG Rv0530|M.tuberculosis_H37Rv PPYRLEPVPHTPYPELATTTLLRPVKPPPSEGWRRLLYLLSGRLINAGEG MMAR_0876|M.marinum_M P----ESVPQTPYPELSTSMLLRPVKSPPTEGWRRLVYVLSGQLINLGES MAV_4615|M.avium_104 PP-RQEHLPHTPYPELSTGMLLRPVQPPPSEGWRLLLYKLSGGLINLGES MSMEG_0975|M.smegmatis_MC2_155 AAEQPPADFATPYEDLTTTALLGRRKSPPTAGWRRWLYLASFKQVNVGES TH_0884|M.thermoresistible__bu -------------VDLSTTALLGQRRPAPSRGWRRWLYRATFRTVNLGES Mflv_0048|M.gilvum_PYR-GCK VAAATPSTELVPYRELSTVALLGALPKAPSAGWRKWVYRASGRLINPGES Mvan_0870|M.vanbaalenii_PYR-1 VTADP-----APYLDLSTVALLGNASRGPSAGWRKWLYWGSGRLIDVGES MAB_3972c|M.abscessus_ATCC_199 VGGQIRPELPPSSRDLSTSALLRPHKPAPSAGWRKTVYRASFGTINLGEG MLBr_00798|M.leprae_Br4923 PASRPQPTTFRHPYDDGRDLLVARRRPAAGDGWRKFVTKATLGRVNPEPS MUL_1004|M.ulcerans_Agy99 AFAHNPAAPTESRNVASSVNQFVQEPVNPAPGSPPLGVPAPAAAPVEVAP . . * . Mb0543|M.bovis_AF2122/97 PRAAHLNDLVAQVNRPLRGCYRIAVLSLKGGVGKTTITATLGATFADLRG Rv0530|M.tuberculosis_H37Rv PRAAHLNDLVAQVNRPLRGCYRIAVLSLKGGVGKTTITATLGATFADLRG MMAR_0876|M.marinum_M PRATRYNNLVAQINRPMRGCYRIALVSLKGGVGKTTITATLGSTFASVRG MAV_4615|M.avium_104 PRAARYNNLVAQVNRPLRGSYRVAFLSLKGGVGKTTIAATLGATFASIRG MSMEG_0975|M.smegmatis_MC2_155 PKVTHRQSLVSQVSHPLQGCYRIAVLSLKGGVGKTTITATLGSTFASIRG TH_0884|M.thermoresistible__bu PKVARHNELLNRVRHPLQDCYRIAVLSLKGGVGKTTITATLGSTFGSARG Mflv_0048|M.gilvum_PYR-GCK PKVIRHDDLLARVQQPLQGCYRVAMLSQKGGVGKTTITATLGATFAGARG Mvan_0870|M.vanbaalenii_PYR-1 PKVIRRNALVAQVQRPLRDCYRIAMLSQKGGVGKTTITATLGATFATTRG MAB_3972c|M.abscessus_ATCC_199 TKKTEENDLIAQVNQPLQGCYKIALLSLKGGVGKTTVTATLGATFASIRG MLBr_00798|M.leprae_Br4923 AKAEQTNELHRRICAPLADVHKVAFVSAKGGVGKTTITVALGNTMARLRG MUL_1004|M.ulcerans_Agy99 PASAPVPHVPAPGAEPGTLAHLPAGIDPAHAAGPAPVAAPAGAPPASAPA . : * : * :. ..* :.::.. * . . . Mb0543|M.bovis_AF2122/97 DRVVAVDANPDRGTLSQKVP-LETPATVRHLLRDADGIERYSDVRGYTSK Rv0530|M.tuberculosis_H37Rv DRVVAVDANPDRGTLSQKVP-LETPATVRHLLRDADGIERYSDVRGYTSK MMAR_0876|M.marinum_M DRVVAVDANPDRGTLSQKVP-LETPATVRHLIRDAEGIERYSDVRGYTSQ MAV_4615|M.avium_104 DRVVAVDANPDRGTLSQKIP-LETAATVRQLLHDAGTIERYSDVRRYTSK MSMEG_0975|M.smegmatis_MC2_155 DRVIAVDANPDRGTLSQKVP-LETAATVRHLLRDAEGIERYSDVRAYTSQ TH_0884|M.thermoresistible__bu DRVVAVDANPDRGTLSQKVP-LQTRATVRDLLRDADRIQTYSDMRAYTSQ Mflv_0048|M.gilvum_PYR-GCK DRVIAVDANPDRGTLSQKVP-VETPATVRHLLRDAEGVSAYSDVRRYTSQ Mvan_0870|M.vanbaalenii_PYR-1 DRVIAVDANPDRGTLSQKVP-LETPATVRHLLRDAEGIAAYSDVRQYTSQ MAB_3972c|M.abscessus_ATCC_199 DRVIAVDANPDRGTLSQKVP-LETPATVRHLLRDANSIQRYSDVRSYTSQ MLBr_00798|M.leprae_Br4923 DRVIAVDVDADLGDLSARFRERGGPQTNIEHFVSARNAKRYADVRVHTVM MUL_1004|M.ulcerans_Agy99 PAAAAPASAPGTAPAPAAAP---GPAPAAPAPAPAAAAPAPAPAPAAPPA . * .. . . . * : . Mb0543|M.bovis_AF2122/97 GPSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTGLLHS Rv0530|M.tuberculosis_H37Rv GPSGLEVLASDSDPASSDAFSADDYTRTLDILERFYGLVLTDCGTGLLHS MMAR_0876|M.marinum_M AKNGFEVLASDTDPAASEAFSADDYTRTLDILERFYGLVLTDCGTGLLHS MAV_4615|M.avium_104 GPSGLEVLASETDPAVSEAFSADDYVRILDILERFYGLVLTDCGPGLLHS MSMEG_0975|M.smegmatis_MC2_155 GPSRLEVLASESDPAVSEAFSSEDYLRTLEVLERFYSLVLTDCGTGLIHS TH_0884|M.thermoresistible__bu SPSRLEVLASESDPAVSEAFSSDDYTRTLRVLERFYSLVLTDCGTGLIHS Mflv_0048|M.gilvum_PYR-GCK GPSRLEVLASESDPAVSEAFSATDYVRALNILERFYSMVLTDCGTGMLHS Mvan_0870|M.vanbaalenii_PYR-1 GPSRLEVLASESDPAVSEAFSAADYCRAVDVLERFYSVVLTDCGTGMLHS MAB_3972c|M.abscessus_ATCC_199 GPSRLEVLASESDPAVSEAFSAEDYSRTLEILEKFYSVVLTDCGTGLMHS MLBr_00798|M.leprae_Br4923 NNDRLEMLGAQNDPRSTYRLGPDDYETAMKILENHCNVILLDCGTPVNGP MUL_1004|M.ulcerans_Agy99 APVAAPVAAPAPVPAPAPAAAPAPEAAAPAPAPAPAPAAAPGFGPDAPPT : .. * : .. . *. . Mb0543|M.bovis_AF2122/97 AMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVN Rv0530|M.tuberculosis_H37Rv AMSAVLPRSDVLVVVSSGSIDGARSAAATLDWLQAHGHDDQVRNSIAVVN MMAR_0876|M.marinum_M AMSAILAKSDILIVVSSGSIDGARSASATLDWLEAHGYEELVRNSIAVIN MAV_4615|M.avium_104 VMKSVLDKADALVVVSSASIDGARSASATLDWLDAHGHEDLVRNSIAVIN MSMEG_0975|M.smegmatis_MC2_155 AMSAVLSKADVLIVVSSGSVDGARSAAATLDWLDAHGHQDLVRNSVAVLN TH_0884|M.thermoresistible__bu AMSAVLANADVLIVISSGSVDGARSAAATLDWLDAHGHQDMVRNSIAVIN Mflv_0048|M.gilvum_PYR-GCK AMSAVIDKADVLVVISSGSADGARSASATLDWLDAHGHDDMVRNSIAVIN Mvan_0870|M.vanbaalenii_PYR-1 AMSGVIDKADVLVVISSGSVDGARSASATLDWLDAHGHGDMVGNSIAVIN MAB_3972c|M.abscessus_ATCC_199 AMSSVLEQADTLVVISSGSVDGARSASATLDWLDAHGHRELVRRSIAVIN MLBr_00798|M.leprae_Br4923 LFNKIVSTVTGLVVVASDDVRGVEGALATLDWLDAHGYARLLQHTVVVLN MUL_1004|M.ulcerans_Agy99 QDFMYPSIGTNCLADGSNIIATALSVAGPATIPTPGPGPGQTAYVFTAVG :. .* . .. .. . ...:. Mb0543|M.bovis_AF2122/97 AVRPRA--------GKVDVGKVVEHFSR-RCRAVRVVPFDPHLEEGAEIA Rv0530|M.tuberculosis_H37Rv AVRPRA--------GKVDVGKVVEHFSR-RCRAVRVVPFDPHLEEGAEIA MMAR_0876|M.marinum_M AVRPRS--------SKVDMQKVIDHFAR-RCRAVRLVPFDPHLEEGAEIV MAV_4615|M.avium_104 GVRPRP--------GKVDMNKVIDHFSR-RCRAVQLVPFDPHLEEGAEID MSMEG_0975|M.smegmatis_MC2_155 AVRPRA--------GKVDLSKVVDHFSR-RCRAVRLVPFDPHLEEGAEIS TH_0884|M.thermoresistible__bu AVRPRS--------GKVDLQKVVDHFSR-RCRAVKMVPFDPHLEEGAEID Mflv_0048|M.gilvum_PYR-GCK AVRPRGRRGTSRGTAKVDLDKIVDHFTR-RCRAVCQVPFDAHLEEGAEIS Mvan_0870|M.vanbaalenii_PYR-1 GVRRGARKGAGKGTAKVDLNKVVDHFAR-RCRAVCQVPFDPHLEEGAEIS MAB_3972c|M.abscessus_ATCC_199 AVRPRS--------GKVDMQKVVDHFSR-RCRAVRLVPFDPHLEEGAEIS MLBr_00798|M.leprae_Br4923 AIQKTK--------PFVDFGIVENQFRK-RVPDFYPMPYDPHLATGLAVE MUL_1004|M.ulcerans_Agy99 TPGPAEV-------QRLPLNVTWVNLTTGKSGSVTLKPRSDINPEGPTTL : . :: : . * . * Mb0543|M.bovis_AF2122/97 LDRLRRETREALTELAAVVAAGFP-------------GDPRRCKPSFT-- Rv0530|M.tuberculosis_H37Rv LDRLRRETREALTELAAVVAAGFP-------------GDPRRCKPSFT-- MMAR_0876|M.marinum_M LDRMKRETREALAELAAVVAEGFG-------------PDQRRSSPSFG-- MAV_4615|M.avium_104 LDRLRRGTREALTELAAIVADGFP-------------GAQRN-PGVLG-- MSMEG_0975|M.smegmatis_MC2_155 LDRLKPKTREALLELAAVVAGDFGSDRTGALGGADSAGSRRIADPRV--- TH_0884|M.thermoresistible__bu LDQLKPQTRQALLELAAVVADGFP-------------GAQQLQSPPF--- Mflv_0048|M.gilvum_PYR-GCK LDRLRPQTRESLLELAAAVADGFP-------------GARNRSDPAD--- Mvan_0870|M.vanbaalenii_PYR-1 LDRLRADTRESLLELAAAVADGFP-------------GAR-RTDPVG--- MAB_3972c|M.abscessus_ATCC_199 LDRLRPQTRRALIELAAVVAQGFT-------------GTQRQQQTFQG-- MLBr_00798|M.leprae_Br4923 YTSLKRKTRKALKELVGGVAQYYP-----------VIRAQQRDEDGLGTW MUL_1004|M.ulcerans_Agy99 TGIADTGSGSIMSTIFGQVTTKER---------------QCQFMPTIGST : : : . *: Mb0543|M.bovis_AF2122/97 ------------ Rv0530|M.tuberculosis_H37Rv ------------ MMAR_0876|M.marinum_M ------------ MAV_4615|M.avium_104 ------------ MSMEG_0975|M.smegmatis_MC2_155 ------------ TH_0884|M.thermoresistible__bu ------------ Mflv_0048|M.gilvum_PYR-GCK ------------ Mvan_0870|M.vanbaalenii_PYR-1 ------------ MAB_3972c|M.abscessus_ATCC_199 ------------ MLBr_00798|M.leprae_Br4923 IETIRQVEMTSR MUL_1004|M.ulcerans_Agy99 VVP---------