For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_1579 (-)

annotation: putative acyl-CoA dehydrogenase
coordinates: 1538984 - 1540558
length: 524

PGDFATVGATLRHQARWRGDHPLLICDAERISYAEADVRSAELARGLIALGAGKGTHVGLLHPNGARFVV
AMLAAARIGAVVVPFSTFVTVRELREQLLDSDVEILLSARSFRPHDYARRLSEAVSETDFDPGRRLFCTA
APQLRRVLFAPQTVGAPGGGIDPALLAAMEDDVQACDPLAIVYTSGSTSTPKGVVHTHGALLEHQRNLNG
IRGLTADDRLFCNSPFFWIGGFAFGLLATLVAGSTLICSNATDAGATLDLLEAEKPTMTNGFSAGIAHLA
EHPSFADRDLSSMRRGNLYPIMAVEARPADPELRHNMLGMTEAGGVVLIGDDEADQPEHRRGSFGKPAPG
FEARILDPDTGAAVAVGEVGELCIRGPYLMQRYHKRSREECFDPDGWFHTGDLVRADADGYFYFAGRLGA
MIKTAGANVSAVEVEKAIAAVTGGATAYVVGIPDARRGQLVAAAVVWPDDRAALDPDALRERLKSELSAY
KIPRRFASLRRADVPLLSSGKVDLRQLRKLFDA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_1579--100% (524)putative acyl-CoA dehydrogenase
M. avium 104MAV_1577-2e-8739.15% (516) AMP-binding enzyme, putative
M. avium 104MAV_0600fadD4e-4731.60% (538) acyl-CoA synthetase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2533cfadD359e-5630.64% (532) AMP-binding domain protein
M. gilvum PYR-GCKMflv_4363-0.066.79% (524) AMP-dependent synthetase and ligase
M. tuberculosis H37RvRv2505cfadD359e-5630.64% (532) AMP-binding domain protein
M. leprae Br4923MLBr_02546fadD21e-2725.24% (515) acyl-CoA synthetase
M. abscessus ATCC 19977MAB_4377c-2e-5530.84% (535) AMP-binding domain protein
M. marinum MMMAR_4026fadD35_10.068.28% (536) fatty-acid-CoA ligase FadD35_1
M. smegmatis MC2 155MSMEG_2216-0.063.87% (512) AMP-binding enzyme
M. thermoresistible (build 8)TH_3577-4e-9941.11% (540) PUTATIVE putative putative acyl-CoA dehydrogenase
M. ulcerans Agy99MUL_4126fadD38e-4730.93% (540) acyl-CoA synthetase
M. vanbaalenii PYR-1Mvan_1981-0.068.70% (524) AMP-dependent synthetase and ligase

CLUSTAL 2.0.9 multiple sequence alignment


Mb2533c|M.bovis_AF2122/97           ------MAAAEVVDPNRLSYDRGPSAPSLLESTIGANLAATAARYGHREA
Rv2505c|M.tuberculosis_H37Rv        ------MAAAEVVDPNRLSYDRGPSAPSLLESTIGANLAATAARYGHREA
MAB_4377c|M.abscessus_ATCC_199      ----------------MKAYDAGATLSPIIEETIGENFERIARAHPDVGA
MUL_4126|M.ulcerans_Agy99           --------------------------MTSDPRTVPTALDRLVRRLPNHDA
MAV_1579|M.avium_104                --------------------------MPGDFATVGATLRHQARWRGDHPL
MMAR_4026|M.marinum_M               --------------------------MAADSPTVAQILRRQARCRPDHPF
Mflv_4363|M.gilvum_PYR-GCK          ---------------------------MSDPCTVAEVLRAQ-RRHGDKPL
Mvan_1981|M.vanbaalenii_PYR-1       --------------------------MTPDPATVADVLRRQ-RLWADKPL
MSMEG_2216|M.smegmatis_MC2_155      -----------------------------MAETLVELLEGL-RDRGDHTL
TH_3577|M.thermoresistible__bu      ------------------------MPFPTIEPTVPALLRWCGERFGSADF
MLBr_02546|M.leprae_Br4923          MTKLRHYLERGAAEVHYLRSIFESGALGFEPPLTYAAMAVAMRKWGDLAM
                                                                         :            

Mb2533c|M.bovis_AF2122/97           LVDMVA------------RRRFNYSELLTDVHRLATGLVRAGIGPGDRVG
Rv2505c|M.tuberculosis_H37Rv        LVDMVA------------RRRFNYSELLTDVHRLATGLVRAGIGPGDRVG
MAB_4377c|M.abscessus_ATCC_199      LVDVSG------------DRRWTYRELDAEINRVARGLMSLGVAAGDRVG
MUL_4126|M.ulcerans_Agy99           LVTD--------------ERSFTVSELNDEVYRAAAALIELGVKPAARVG
MAV_1579|M.avium_104                LICD--------------AERISYAEADVRSAELARGLIALGAGKGTHVG
MMAR_4026|M.marinum_M               LVCD--------------SDRISYAQADLRSAELARGLIALGIGKAAHVG
Mflv_4363|M.gilvum_PYR-GCK          LICD--------------DERLSYAEADERSAVLAARLTTLGVGKGSHVG
Mvan_1981|M.vanbaalenii_PYR-1       LVCD--------------RTRLSYGEADERSAVLAQRLVALGAGKGTHVG
MSMEG_2216|M.smegmatis_MC2_155      LVCD--------------DERLTYADAEHRSARLADALIALGAGKGTHVG
TH_3577|M.thermoresistible__bu      LIAG--------------GRTLSYADLNRRSARLGMSLLRHGVGKGDHVG
MLBr_02546|M.leprae_Br4923          LPAMPARRSPHRAALIDEEGTLTYKELDRAAHALANGLIAKGVRGGDGIA
                                    *                     .  :        .  *   *   .  :.

Mb2533c|M.bovis_AF2122/97           IWAPNRWEWVLVQYATAEIGAILVTINPAYRVREVEYALRQSGVAMVIAV
Rv2505c|M.tuberculosis_H37Rv        IWAPNRWEWVLVQYATAEIGAILVTINPAYRVREVEYALRQSGVAMVIAV
MAB_4377c|M.abscessus_ATCC_199      IWAPNCAEWVLVQYATAKIGAILVNINPAYRTHELAYALNQSGVRTLICA
MUL_4126|M.ulcerans_Agy99           IWSPNTWHWVVACLAIHHVGAAMVPLNTRYTADEAADILARTEAPVLFAM
MAV_1579|M.avium_104                LLHPNGARFVVAMLAAARIGAVVVPFSTFVTVRELREQLLDSDVEILLSA
MMAR_4026|M.marinum_M               LLYPNGSDFVIGMLAAARIGAVVIPISTFVTPRELHEQLVDSDTQILLSA
Mflv_4363|M.gilvum_PYR-GCK          ILYPNGAQWVVAMLAAARIGAVVVPFSTFSTAVELRRQLRDSDVGVLLAT
Mvan_1981|M.vanbaalenii_PYR-1       LLYPNSAEFVVAMLAATRIGAVVVPFSTFGTAPEVRRQLVDSDVSVLLAA
MSMEG_2216|M.smegmatis_MC2_155      VLYPNGADFVVAMLAVARVGAVVVPFSTFLTEAELRVQLLDSDVSIMLSA
TH_3577|M.thermoresistible__bu      ILMPNSVDWAVAWFAVTRIGAVAVPINTFSKPRELAWTVRHADLRAVLAW
MLBr_02546|M.leprae_Br4923          ILARNHRWFVIANYGCARVGARIILLNSEFSGPQIKEVSEREGAKVIIYD
                                    :   *   :.:   .  .:**  : :..     :            ::  

Mb2533c|M.bovis_AF2122/97           ASFKDADYAAMLAEVG-------------PRCPDLADVILLESDRWDALA
Rv2505c|M.tuberculosis_H37Rv        ASFKDADYAAMLAEVG-------------PRCPDLADVILLESDRWDALA
MAB_4377c|M.abscessus_ATCC_199      KAFKSSDYVAMASQVM-------------PDAPGLRDVVFIGTSDWTELV
MUL_4126|M.ulcerans_Agy99           GHFLGSDRVAGLDRKA-------------LPALRHIVRIPIEEPDGTWDE
MAV_1579|M.avium_104                RSFRPHDYARRLSEAVSETDFDPGRRLFCTAAPQLRRVLFAP---QTVGA
MMAR_4026|M.marinum_M               DTFRSHDYAGRLRQLLGDTGFDGEDRLFSRAIPQLR-TAWVS---YRRGA
Mflv_4363|M.gilvum_PYR-GCK          RAFRTHDYVRALGEAVGVPLDDG--PLLSAEVPVLRHVVFD------AEC
Mvan_1981|M.vanbaalenii_PYR-1       RSFRSHDYVQTLTDAVGARPTHG--PVFSTAAPVLRHVLFDD---QDSDA
MSMEG_2216|M.smegmatis_MC2_155      RSFRSHDYVGQISRVR-------------ADAPCLRHVVFE------IPA
TH_3577|M.thermoresistible__bu      ADFGTNDFLARLEEALPGLDRQRCGRIAVRGAPFLRTVAVWGSPDRRWAT
MLBr_02546|M.leprae_Br4923          DEYT--KVVSKAEPALG-------------KLRALGVNPDEEEPPGSTDE
                                      :   .                                           

Mb2533c|M.bovis_AF2122/97           G-------------AEPDLPALQQTAARLDGSDPVNIQYTSGTTAYPKGV
Rv2505c|M.tuberculosis_H37Rv        G-------------AEPDLPALQQTAARLDGSDPVNIQYTSGTTAYPKGV
MAB_4377c|M.abscessus_ATCC_199      AG-----------AERVTETALRARMSQLSNTDPINIQYTSGTTGYPKGA
MUL_4126|M.ulcerans_Agy99           FI-----------ETGTDTGAVTARAAAVSPDDVSDILFTSGTTGRSKGV
MAV_1579|M.avium_104                P------------GGGIDPALLAAMEDDVQACDPLAIVYTSGSTSTPKGV
MMAR_4026|M.marinum_M               PRRTRSIECVYRLSQTIDPTMLRALEDDVDGSDVLAIVYTSGTTSAPKGV
Mflv_4363|M.gilvum_PYR-GCK          GG-------------AAD---VSALEGDVDGSDVLAIIYTSGSTSDPKGV
Mvan_1981|M.vanbaalenii_PYR-1       RG-------------RVDDALLRAMEDDVDGCDPLAVIYTSGSTSAPKGV
MSMEG_2216|M.smegmatis_MC2_155      AG-------------DPER--RAGLEADVEGSDVLAIIYTSGSTGAPKGV
TH_3577|M.thermoresistible__bu      PVADDALGDAPGDVPGVDAGHLTAVEACVTPADDVAVIYTSGSTGDPKGA
MLBr_02546|M.leprae_Br4923          TL-------------AELIARSSSAPAPKVRKRASIIILTSGTTGTPKGA
                                                                        :  ***:*. .**.

Mb2533c|M.bovis_AF2122/97           TLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGA
Rv2505c|M.tuberculosis_H37Rv        TLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGA
MAB_4377c|M.abscessus_ATCC_199      TLSHRNVLNNGFFVAESIQLQAGDRLCIPVPFYHCFGMVMGNLGCTTHGA
MUL_4126|M.ulcerans_Agy99           LCAHRQSLSASASWAANGKITADDRHLCINPFFHNFGYKAGILACLQTGA
MAV_1579|M.avium_104                VHTHGALLEHQRNLNGIRGLTADDRLFCNSPFFWIGGFAFGLLATLVAG-
MMAR_4026|M.marinum_M               VHTHSALVRHQQNLNVIRGLGTDDKLFCNSPFCWIGGFAFGLLATLLAG-
Mflv_4363|M.gilvum_PYR-GCK          VHTHTSLLAHQRGLNEIRGLTAEDRLFCNSPFFWIGGFAFGLLATLVAG-
Mvan_1981|M.vanbaalenii_PYR-1       VHTHAALLAHQRSLNEIRRLTADDRLFCNSPFFWIGGFAFGLLATLVAG-
MSMEG_2216|M.smegmatis_MC2_155      VHTHSSLLAHQRDLNVLRGLTADDKLFCNSPFFWVGGLAFALLASMIAG-
TH_3577|M.thermoresistible__bu      VHSHGALIRHSFNLTHVYVVRPGDVLFTSMPFFWVGGLITGLHAVVHHG-
MLBr_02546|M.leprae_Br4923          NRNTPASLAPLGGILSKVPFRAHEVTLLPAPMFHALGYLHATLAMFLGS-
                                           :             . :      *:    *   .  .    . 

Mb2533c|M.bovis_AF2122/97           AMVIPAPGFDPAATLRAVQDERCTSLYGVPTMFIAELGLPD--FTDYELG
Rv2505c|M.tuberculosis_H37Rv        AMVIPAPGFDPAATLRAVQDERCTSLYGVPTMFIAELGLPD--FTDYELG
MAB_4377c|M.abscessus_ATCC_199      TIVMPAPGFDPGRTLEAIERERCVGVYGVPTMFIAMLADPG--FAHRDLS
MUL_4126|M.ulcerans_Agy99           TLFPHLT-FDPLRTLQAIERHRITVLPGPPTIYQTLLDHPA--RDDYDLS
MAV_1579|M.avium_104                STLICSNATDAGATLDLLEAEKPTMTNGFSAGIAHLAEHPS--FADRDLS
MMAR_4026|M.marinum_M               STLVCSNA-DAATTLDLLEREKPTMTNGFASTVARLANHPS--FGRRDLS
Mflv_4363|M.gilvum_PYR-GCK          STLICSTASDAGRTLDLLEAEKPTMTNGFVAGITHLTRHPS--FARRDLS
Mvan_1981|M.vanbaalenii_PYR-1       ATLICSNATDAADTLDLLEAEKPTVTNGFVAGITHLPRHPS--FARRDLS
MSMEG_2216|M.smegmatis_MC2_155      ATLVCSNSTDAGATFDLLEAEKPTITNGFVAGIAHLTRHPS--FPHRNLS
TH_3577|M.thermoresistible__bu      ATLVTQPAFDPADALRLIETHRATITLGWPQQGRTLSEHPD--FAIRDLS
MLBr_02546|M.leprae_Br4923          -TLVLRRRFKPATVLEDIEKHQATAMVVVPVMLSRILDTLENLETKSDLS
                                      .      ..  .:  :: .: .                       :*.

Mb2533c|M.bovis_AF2122/97           SLRTGIMAGAACPVEVMRKVISRMHMPGVSICYGMTETSPVSTQTRADDS
Rv2505c|M.tuberculosis_H37Rv        SLRTGIMAGAACPVEVMRKVISRMHMPGVSICYGMTETSPVSTQTRADDS
MAB_4377c|M.abscessus_ATCC_199      TLRTGIMAGSVCPVEVMKRCIDEMHMAGVAIAYGMTETSPVSCQTLFDDD
MUL_4126|M.ulcerans_Agy99           SLRFAVTGAATVPVVLVERMQSELDIDIVLTAYGLTEANGMGTMCRADDD
MAV_1579|M.avium_104                SMRRGNLYPIMAVEARPADPELRHNMLGMTEAGGVVLIGDD-----EADQ
MMAR_4026|M.marinum_M               SMRRGNLYPIMAPEARPVDPELRHNMLGMTEAGSIVLISAD-----ESDQ
Mflv_4363|M.gilvum_PYR-GCK          SMRRGNLYSIMAPDVRPADPELRHNMLGMTEAGSVVLLSGD-----ESDQ
Mvan_1981|M.vanbaalenii_PYR-1       SMRRGNLYPIMAAGARPADAELRHNMLGMTETGSVVLLSGD-----DSDQ
MSMEG_2216|M.smegmatis_MC2_155      SIRRGNLYPLMAPDVRPADPDLRHNMLGSTESGSVVLLDPD-----DTDQ
TH_3577|M.thermoresistible__bu      SVRRTSMPAMVPPDRRPVACDS----LGMTELCGNHLGADP-----YAEQ
MLBr_02546|M.leprae_Br4923          SLRVVFVSGSQLGAELATRALEELGPVIYNMYGSTEIAFAT---IAGPKD
                                    ::*                              .              ..

Mb2533c|M.bovis_AF2122/97           VDRRVGTVGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWND
Rv2505c|M.tuberculosis_H37Rv        VDRRVGTVGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWND
MAB_4377c|M.abscessus_ATCC_199      LDRRTATVGRAHPHIEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWND
MUL_4126|M.ulcerans_Agy99           ALTVATTCGRPFADFELRIG-PDTGEVLLRGP---------NVMLGYLDD
MAV_1579|M.avium_104                PEHRRGSFGKPAPGFEARILDPDTGAAVAVGEVGELCIRGPYLMQRYHK-
MMAR_4026|M.marinum_M               PESRRGSFGKPAPGFDTIIIEPGTGEVANVGQVGELCIRGPFVMQGYYK-
Mflv_4363|M.gilvum_PYR-GCK          PEARRGSYGFLAPGFDARVVDPDTGSDTDG-AVGELVLRGPHLMQRYYG-
Mvan_1981|M.vanbaalenii_PYR-1       PESRRGSFGFLAPGFQARVVDPDTGCDVAVSTPGVLLLRGPFLMQGYYG-
MSMEG_2216|M.smegmatis_MC2_155      PEHRRGSFGRPAPGFETKVLD-----------SGELCIRGPYLMQGYYG-
TH_3577|M.thermoresistible__bu      PPHRRDTVGPSIDGLTHRIADPETGEPVPTGQTGEIWVRGYSLMQRLHK-
MLBr_02546|M.leprae_Br4923          LQINSATVGPVVKGVKVKILD-DSGKEVPRGQVGRIFVGNAFPFEGYTG-
                                          : *     .   :                        :      

Mb2533c|M.bovis_AF2122/97           PQKTAEVIDADGWMHTGDLAEMDPSGYVRIAGRIKDLVVR-GGENISPRE
Rv2505c|M.tuberculosis_H37Rv        PQKTAEVIDADGWMHTGDLAEMDPSGYVRIAGRIKDLVVR-GGENISPRE
MAB_4377c|M.abscessus_ATCC_199      EAHTREVLDTDGWMHTGDLAVMRDDGYCTIIGRLKDMVIR-GGENIYPRE
MUL_4126|M.ulcerans_Agy99           PRATAAAIDADGWLHTGDIGVLDEAGNLRITDRLKDMYIC-GGFNVYPAE
MAV_1579|M.avium_104                -RSREECFDPDGWFHTGDLVRADADGYFYFAGRLGAMIKT-AGANVSAVE
MMAR_4026|M.marinum_M               -RSREECFDADGWFHTGDLVRADQDGYMYFTGRLSSLIKT-AGANVSPAE
Mflv_4363|M.gilvum_PYR-GCK          -RSREECFDADGWFHTGDLVRRDDDGVFYFVGRAGSMIKT-AGANVAPAE
Mvan_1981|M.vanbaalenii_PYR-1       -RAREDCFDGDGWFDTGDLVRRDGDGVFYFIGRTGTMIKT-AGANVAPGE
MSMEG_2216|M.smegmatis_MC2_155      -RSREECFDTDGWFHTGDLVRVDDDGYFYFLGRAGAMIKT-AGANVTPDE
TH_3577|M.thermoresistible__bu      -REREDVFTEDGYYRTGDCGAADADGWIRFTGRLGDLIKTGSGTNVTPAE
MLBr_02546|M.leprae_Br4923          ---GGGKQIIDGLLSSGDVGYFDEHDLLYISGRDDEMIVS-GGENVFPAE
                                              **   :**       .   : .*   :    .* *: . *

Mb2533c|M.bovis_AF2122/97           IEELLHTHPD-----IVDGHVIGVPDAKYGEELMAVVKLRNDAPELTIER
Rv2505c|M.tuberculosis_H37Rv        IEELLHTHPD-----IVDGHVIGVPDAKYGEELMAVVKLRNDAPELTIER
MAB_4377c|M.abscessus_ATCC_199      IEEFLLTHPD-----IEDVHVVGVPDEKYGEELCAWVRMRPDRVVIDAVA
MUL_4126|M.ulcerans_Agy99           VEQVLARLDG-----VADVAVIGIPDHRLGEVGRAFIVARPG-FNLDEKS
MAV_1579|M.avium_104                VEKAIAAVTG-----GATAYVVGIPDARRGQLVAAAVVWPDDRAALDPDA
MMAR_4026|M.marinum_M               VERAIAKLG-------MVAHVVGIPDPQRGQVVAAVLVVADGVGALDELA
Mflv_4363|M.gilvum_PYR-GCK          VEKALSAALQAV-DAGVAVHVVGLPDPERGQIVAAVIATDNG-TVFDEPA
Mvan_1981|M.vanbaalenii_PYR-1       VEKAIIAVIP---DPDVVVHVVGLPDAERGQLVAAVIASD---TEVDVSG
MSMEG_2216|M.smegmatis_MC2_155      VQKALQHVLEGRDMRDVTVQVVGLPDQERGQLVAAVVATADP-AAFDEAA
TH_3577|M.thermoresistible__bu      VESALCELPG-----VLEAYVVGARDPHGATVVAAAAVPGRG-HELDAAA
MLBr_02546|M.leprae_Br4923          VEDLISGHPE-----VVEATAIGVDDKEWGARLRAFVVKKQD-ATIDEDA
                                    ::  :               .:*  * . .    *          .    

Mb2533c|M.bovis_AF2122/97           LREYCMGRIARFKIPRYLWIVD--EFPMTVTGKVRKVEMRQQALEYLRGQ
Rv2505c|M.tuberculosis_H37Rv        LREYCMGRIARFKIPRYLWIVD--EFPMTVTGKVRKVEMRQQALEYLRGQ
MAB_4377c|M.abscessus_ATCC_199      IRAFASGRLAHYKIPRYVHVVE--SFPMTVTGKVRKIEMRQQTIQIFGLP
MUL_4126|M.ulcerans_Agy99           VIDYTREHLANFKAPRSVRFVD--TLPRNAGGKVVKPQLRELA-------
MAV_1579|M.avium_104                LRERLKSELSAYKIPRRFASLRRADVPLLSSGKVDLRQLRKLFDA-----
MMAR_4026|M.marinum_M               LRERLETELSAYKIPTRFATLPPSEIPLLSSGKVDTHQLKKCFDA-----
Mflv_4363|M.gilvum_PYR-GCK          VKEALSTQVSAYKIPRRVLSLRHTEIPTMSSGKIDLAALRRLFDD-----
Mvan_1981|M.vanbaalenii_PYR-1       LQETLRSHLSAYKIPRRVATVRHADIPMLSSGKVDLSALRRLFGALR---
MSMEG_2216|M.smegmatis_MC2_155      VRAALRAQLSSYKVPRRFAVIHSDELPVKSSGKIDVAALRELFDD-----
TH_3577|M.thermoresistible__bu      LRDGLRTMLSAYKIPRHIWVADKADLPFTDTGKIVRSELAEQLSARLRQQ
MLBr_02546|M.leprae_Br4923          IKAYVRDHLARYKVPREVIFLE--ELPRNPTGKVLKRELRDFEVH-----
                                    :       :: :* *  .       .*    **:    :           

Mb2533c|M.bovis_AF2122/97           Q-------
Rv2505c|M.tuberculosis_H37Rv        Q-------
MAB_4377c|M.abscessus_ATCC_199      EPGRTDEQ
MUL_4126|M.ulcerans_Agy99           --------
MAV_1579|M.avium_104                --------
MMAR_4026|M.marinum_M               --------
Mflv_4363|M.gilvum_PYR-GCK          --------
Mvan_1981|M.vanbaalenii_PYR-1       --------
MSMEG_2216|M.smegmatis_MC2_155      --------
TH_3577|M.thermoresistible__bu      ATADL---
MLBr_02546|M.leprae_Br4923          --------