For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAIDPSDILLTDRVAVVTGAGAGIGRGIAAGLAAFGARVAIWERDAQTCTRAAESIGGLGIVTDVRDSGQ VDTALQRTITELGTPTILVNNAGGVFSSPLLETSENGWDALYRANLRHVLLCTQRIARQLVSVGAGGSII SLTSIEGVRAAPGYAAYAAAKAGVINYTKTAALELAPHGIRVNAIAPDITLTEGLQQLGGEAATTAMGNI VPLGRPGHVDEIASAAVFLASDMSGYLTGQTLHVDGGTQASSGWYHDPRTGDYRLGPAG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_0894 | - | - | 100% (269) | oxidoreductase, short chain dehydrogenase/reductase family protein |
M. avium 104 | MAV_3012 | - | 2e-44 | 39.77% (264) | short-chain dehydrogenase/reductase SDR |
M. avium 104 | MAV_0886 | - | 2e-36 | 39.30% (257) | short-chain dehydrogenase/reductase SDR |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1385 | fabG | 7e-34 | 36.18% (246) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. gilvum PYR-GCK | Mflv_2424 | - | 1e-107 | 71.27% (268) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv1350 | fabG | 8e-34 | 36.18% (246) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. leprae Br4923 | MLBr_01807 | fabG1 | 3e-26 | 33.19% (238) | 3-oxoacyl- |
M. abscessus ATCC 19977 | MAB_0833 | - | 1e-35 | 36.18% (246) | Short-chain dehydrogenase/reductase |
M. marinum M | MMAR_4756 | - | 1e-117 | 76.78% (267) | oxidoreductase |
M. smegmatis MC2 155 | MSMEG_4850 | - | 1e-111 | 74.16% (267) | short-chain dehydrogenase/reductase SDR |
M. thermoresistible (build 8) | TH_3505 | - | 1e-116 | 75.66% (267) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_0327 | - | 1e-118 | 76.78% (267) | oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_4228 | - | 1e-109 | 72.76% (268) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4756|M.marinum_M ---MAIDPA------DVLLNGRVAVVTGAGSGIGRGVAAGLAAFGASVAI MUL_0327|M.ulcerans_Agy99 ---MAIDPA------DVLLNGRVAVVTGAGSGIGRGVAAGLAAFGASMAI MAV_0894|M.avium_104 ---MAIDPS------DILLTDRVAVVTGAGAGIGRGIAAGLAAFGARVAI Mflv_2424|M.gilvum_PYR-GCK ---MAITAS------DILLTGRVAVVTGGGAGIGRGIAQGLAAFGASVAI Mvan_4228|M.vanbaalenii_PYR-1 ---MTIAPS------DILLTGRVAVVTGGGAGIGKGIAHGLAAFGASVAI MSMEG_4850|M.smegmatis_MC2_155 ---MAINPS------DILLTGRVAVVTGGGAGIGRGIAEGLAAFGARVAI TH_3505|M.thermoresistible__bu ---LTIAPA------DILLTDRVAVVTGGGAGLGRGIAAGFAAFGARVAI MAB_0833|M.abscessus_ATCC_1997 -MNRETFSR------LFDLTGRTAIVTGGTRGIGRALAEGYACAGANVVV Mb1385|M.bovis_AF2122/97 ---MASLLN-----------ARTAVITGGAQGLGLAIGQRFVAEGARVVL Rv1350|M.tuberculosis_H37Rv ---MASLLN-----------ARTAVITGGAQGLGLAIGQRFVAEGARVVL MLBr_01807|M.leprae_Br4923 MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV * ::**. *:* .:. .. * :.: MMAR_4756|M.marinum_M WERDPQTCAQAAAELG-----GLGIATDVRSGDQVDAALQRTQAELGEVT MUL_0327|M.ulcerans_Agy99 WERDPQTCAQAAAELG-----GLGIATDVRSGDQVDAALQRTQAELGAVT MAV_0894|M.avium_104 WERDAQTCTRAAESIG-----GLGIVTDVRDSGQVDTALQRTITELGTPT Mflv_2424|M.gilvum_PYR-GCK WERDPDTCAAAAAAIG-----GLGLEVDVRDAAAVDTALDRTERELGTVS Mvan_4228|M.vanbaalenii_PYR-1 WERDPQTCGEAAASVG-----ALGLPTDVRDAEAVQAALERTERELGTVS MSMEG_4850|M.smegmatis_MC2_155 WERDPETCEAAARAVG-----GVGIVTDVRDADQVDAALAQTTSELGTVS TH_3505|M.thermoresistible__bu WERDPDSCARTAEEIG-----ALGIVTDVRDSAAVSAALRQTTEQLGSPT MAB_0833|M.abscessus_ATCC_1997 ASRKPEACTEAVERLRSLGARALGVPTHTGDIHSLEELVRATAEEFGGID Mb1385|M.bovis_AF2122/97 GDVNLEATEVAAKRLGG-DDVALAVRCDVTQADDVDILIRTAVERFGGLD Rv1350|M.tuberculosis_H37Rv GDVNLEATEVAAKRLGG-DDVALAVRCDVTQADDVDILIRTAVERFGGLD MLBr_01807|M.leprae_Br4923 THR---ASVVPDWFFG--------VECDVTDNDAIGAAFKAVEEHQGPVE : . . : .. . : . . . * MMAR_4756|M.marinum_M ILVNNVGGVFWSPLLQTSEKGWDALYRSNLGHVLLCTQRVARRLVAAELP MUL_0327|M.ulcerans_Agy99 ILVNNVGGVFWSPLLQTSEKGWDALYRSNLGHVLLCTQRVARRLVAAGLP MAV_0894|M.avium_104 ILVNNAGGVFSSPLLETSENGWDALYRANLRHVLLCTQRIARQLVSVGAG Mflv_2424|M.gilvum_PYR-GCK ILVNNAGGTFNSPLLDTSENGWDALYRSNLRHVLLCTQRVARRLVAAEQT Mvan_4228|M.vanbaalenii_PYR-1 ILVNNAGGTFNSPLLETSENGWDALYRSNLRHVLLCTQRVARRLVEVGQP MSMEG_4850|M.smegmatis_MC2_155 ILVNNAGGVFASPLLETTENGWDALYKANLRHVLLCTQRVARDMVAAEMP TH_3505|M.thermoresistible__bu ILVNNAGGTFSSPLLETSENGWDALYRANLRHVLLCTQQVGRQLVAAGQP MAB_0833|M.abscessus_ATCC_1997 IVVNNAANALTEPVGAFTVDGWDKSFGVNLRGPVFLVQAALPHLVAS-PH Mb1385|M.bovis_AF2122/97 VMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRER-KR Rv1350|M.tuberculosis_H37Rv VMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRER-KR MLBr_01807|M.leprae_Br4923 VLVANAGITSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIKQ-RF ::* *.. . : : . :: :* .: : MMAR_4756|M.marinum_M GSIMAITSIEGVRAAPGYAAYAAAKAGVVNYTKTAALELAHHGIRVNAIA MUL_0327|M.ulcerans_Agy99 GSIMAITSIEGVRAAPGYAAYAAAKAGVVNYTKTTALELAHHGIRVNAIA MAV_0894|M.avium_104 GSIISLTSIEGVRAAPGYAAYAAAKAGVINYTKTAALELAPHGIRVNAIA Mflv_2424|M.gilvum_PYR-GCK GSVINVTSIEGSRAAPGYAAYAAAKAGVVNYTKTASFELAPYGIRVNGLA Mvan_4228|M.vanbaalenii_PYR-1 GSVINITSIEGSRAAPGYAAYAAAKAGVVNYTKTASFELAPHRIRVNALA MSMEG_4850|M.smegmatis_MC2_155 GSIINLTSIEGVRAAPRYAAYSAAKAGVINYTLTAAFELAPYGIRVNALA TH_3505|M.thermoresistible__bu GSIVNITSIEGARAAPGYAAYAAAKAGVINYTRTAAFELAPHRIRVNAIA MAB_0833|M.abscessus_ATCC_1997 AAVLNVVSVGAFMFGQGVSMYSAAKAALVSYTRSAAAELASRGVRVNALA Mb1385|M.bovis_AF2122/97 GAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIA Rv1350|M.tuberculosis_H37Rv GAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIA MLBr_01807|M.leprae_Br4923 GRYIFMGSVVGLSGVPGQANYAASKSGLIGMARSLARELGSRSITANVVA . : : *: . : *:*:*:.::. : : : **. : .* :* MMAR_4756|M.marinum_M PDITMTEGLAQLGGAAALERIGSLVPLGRPGDIDEIASVAVFLASDMARY MUL_0327|M.ulcerans_Agy99 PDITMTEGLAQLGGAAALERIGSLVPLGRPGDVDEIASVAVFLASDMARY MAV_0894|M.avium_104 PDITLTEGLQQLGGEAATTAMGNIVPLGRPGHVDEIASAAVFLASDMSGY Mflv_2424|M.gilvum_PYR-GCK PDLTMTEGLQKLAFGELSGTVARMVPMRRAGHVDEMASAAVFLASDMASY Mvan_4228|M.vanbaalenii_PYR-1 PDLTMTEGLQKLAFGDLSGTMADMVPMRRVGHVDEMASAAVFLASDMAAY MSMEG_4850|M.smegmatis_MC2_155 PDLTVTDGLLALSGGRQPG--GDAIPMKRPGHVDEMAGAAVFLASGMSSY TH_3505|M.thermoresistible__bu PDIAVTEGLQRMSPDGIPPEVGHAIPLGRPGHVDEIAGAAVFLASEMSSY MAB_0833|M.abscessus_ATCC_1997 PGAIDTD-MVRKTPPAEVERMANTNHLKRLGLPDEMVGTALLLTSDAGSY Mb1385|M.bovis_AF2122/97 PGLIRSAMTEAMP-QRIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSY Rv1350|M.tuberculosis_H37Rv PGLIRSAMTEAMP-QRIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSY MLBr_01807|M.leprae_Br4923 PGFIDTEMTRAMD-SKYQEAALQAIPLGRIGAVEEIAGAVSFLASEDAGY *. : : * * .*:.... :*:* . * MMAR_4756|M.marinum_M VTGQTIHVDGGTHAAAGWYRDPQTGEYRLGPG--- MUL_0327|M.ulcerans_Agy99 VTGQTIHVDGGTHAAAGWYRDPQTGEYRLGPG--- MAV_0894|M.avium_104 LTGQTLHVDGGTQASSGWYHDPRTGDYRLGPAG-- Mflv_2424|M.gilvum_PYR-GCK ITGQTIHVDGGTEAAGGWYFHPDNGAPTLGPA--- Mvan_4228|M.vanbaalenii_PYR-1 ITGQTIHVDGGTAAAGGWYFHPETGVPTLGPA--- MSMEG_4850|M.smegmatis_MC2_155 ITGQTLHVDGGTQAAGGWYHHPQTGAPTLGPG--- TH_3505|M.thermoresistible__bu ITGQTLHVDGGTQAAGGWYHHPRTGAPTLGPGPVR MAB_0833|M.abscessus_ATCC_1997 ITGQTIIADGGLVAR-------------------- Mb1385|M.bovis_AF2122/97 MTGTVLDVTGGRFI--------------------- Rv1350|M.tuberculosis_H37Rv MTGTVLDVTGGRFI--------------------- MLBr_01807|M.leprae_Br4923 ISGAVIPVDGGLGMGH------------------- ::* .: . **