For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLLTVLRFNFASPHGDPRTQSRLMSAALELAQWGESHGITSVSVDEHHATGHGWSCNPIMAAAMFLARTS TLIASVDCALGPLWNPVRLAEDIALVDNMSRGRLHTTVGLGYRPVEYDALGADFGRRGALMDSLLERMLA VWSGGGAPAGICTGTWTRPHPPLYVGGGARATARRAARFRLPLSLADHLPEIADYYRELCAEIDLAPVVL MPGPLNRGMIYLHEDPERAWAELGDHILWEAVTYGGWSTDQRSLMHLPGVQTLDEVRASGRYRFLTPDQL IAEVRDAPDFGPIVLHPLVGGMPVEEAWQSVQLLTDKVLPALKG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_0338 | - | - | 100% (324) | hypothetical protein MAV_0338 |
M. avium 104 | MAV_2133 | - | 8e-40 | 32.82% (326) | hypothetical protein MAV_2133 |
M. avium 104 | MAV_2659 | - | 7e-18 | 34.18% (196) | hypothetical protein MAV_2659 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3106c | - | 4e-11 | 31.97% (122) | hypothetical protein Mb3106c |
M. gilvum PYR-GCK | Mflv_4097 | - | 7e-13 | 28.02% (207) | luciferase family protein |
M. tuberculosis H37Rv | Rv3079c | - | 4e-11 | 31.97% (122) | hypothetical protein Rv3079c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0366 | - | 9e-15 | 32.04% (181) | hypothetical protein MAB_0366 |
M. marinum M | MMAR_0236 | - | 4e-59 | 37.96% (324) | hypothetical protein MMAR_0236 |
M. smegmatis MC2 155 | MSMEG_5626 | - | 3e-13 | 39.25% (107) | luciferase |
M. thermoresistible (build 8) | TH_3375 | - | 2e-25 | 28.92% (332) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4877 | - | 4e-59 | 37.96% (324) | hypothetical protein MUL_4877 |
M. vanbaalenii PYR-1 | Mvan_2248 | - | 4e-13 | 30.22% (182) | luciferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3106c|M.bovis_AF2122/97 --MQFGVLTFVT---------DEGIGPAELGAALEHRGFESLFLAEHTHI Rv3079c|M.tuberculosis_H37Rv --MQFGVLTFVT---------DEGIGPAELGAALEHRGFESLFLAEHTHI Mflv_4097|M.gilvum_PYR-GCK --MQFAITHPMHSHPY-NPELVTGAGIARVAVAAEKAGFGGFGFTDH--- Mvan_2248|M.vanbaalenii_PYR-1 --MQFAITHPMHSHPY-NPELVTGTGIAQVAQAAEKAGFGGFGFTDH--- MMAR_0236|M.marinum_M --MSLLTALRLN--------MTNIADPAADHAQRYRAALDMAEYADHHGF MUL_4877|M.ulcerans_Agy99 --MSLLTALRLN--------MTNIADPAADHAQRYRAALDMAEYADHHGF MAV_0338|M.avium_104 ---MLLTVLRFN--------FASPHGDPRTQSRLMSAALELAQWGESHGI TH_3375|M.thermoresistible__bu --VGLGALTAQT-----------RSGTAAESTEALTMLLDTCVLAEDEGL MAB_0366|M.abscessus_ATCC_1997 --MKIGVVAPVELG-----VTAEPDKILEFARAAERLGFSEISVVEHAVV MSMEG_5626|M.smegmatis_MC2_155 MKVNLGTGAQNSRDWERVLAEDWSRPPATPDHQCVQAALALGDLAEPLGF : : : Mb3106c|M.bovis_AF2122/97 PVNTQSPYPGGGPIPEKY---YRTLDPFVALAAAAATTQSLVLGTGIALI Rv3079c|M.tuberculosis_H37Rv PVNTQSPYPGGGPIPEKY---YRTLDPFVALAAAAATTQSLVLGTGIALI Mflv_4097|M.gilvum_PYR-GCK PAPTQRWLEAGG---------HDALDPFVAMGFAAAHTTTLRLIPNIVVL Mvan_2248|M.vanbaalenii_PYR-1 PAPTQRWLEAGG---------HDALDPFVAMGFAAAHTSTLRLIPNIVVL MMAR_0236|M.marinum_M TAVSAEEHHLAATG--------WLPSPLILAAAVAGRTRNVRISINALIV MUL_4877|M.ulcerans_Agy99 TAVSAEEHHLAATG--------WLPSPLILAAAVAGRTRNVRISINALIV MAV_0338|M.avium_104 TSVSVDEHHATGHG--------WSCNPIMAAAMFLARTSTLIASVDCALG TH_3375|M.thermoresistible__bu DSAWVAEHHFAADG--------FLSSPMTVLAALSQRTSRIRLSTNVMIG MAB_0366|M.abscessus_ATCC_1997 IGDTQSTYPYSPTGQSHLPDDIDIPDPLELLSFVAAATTTLGLSTGVLVL MSMEG_5626|M.smegmatis_MC2_155 DGIWFPEHHGTPYG--------MTPNPIQALTYFAGRTERVSLGTFVAVV .*: * : : Mb3106c|M.bovis_AF2122/97 PERDPIVTAKEVASLDLVSQGRFR-FGVGVGWLREEVANHGVDPAVRGRV Rv3079c|M.tuberculosis_H37Rv PERDPIVTAKEVASLDLVSQGRFR-FGVGVGWLREEVANHGVDPAVRGRV Mflv_4097|M.gilvum_PYR-GCK PYRNPFVVAKAGATLDLISDGRFT-LAVGVGYLKREFAALGVEFDERAAV Mvan_2248|M.vanbaalenii_PYR-1 PYRNPFVVAKAGATLDLISEGRFT-LAVGVGYLKREFTALGVDFDERAEL MMAR_0236|M.marinum_M PLYDPVRLAEDIAVLDNLSQGRFS-FVAGMGYRPQEYHAAGKDWSRRGAL MUL_4877|M.ulcerans_Agy99 PLYDPVRPAEDIAVLDNLSQGRFS-FVAGMGYRPQEYHAAGKDWSRRGAL MAV_0338|M.avium_104 PLWNPVRLAEDIALVDNMSRGRLH-TTVGLGYRPVEYDALGADFGRRGAL TH_3375|M.thermoresistible__bu PLYDPIRLAEDAAVVDQLSRGRLM-LGLGLGYRDVEFAGLGRRRQERGRR MAB_0366|M.abscessus_ATCC_1997 PDHHPVVLAKRLATLDRLSRGRLR-ICAGVGWMREEIEACGGDFDRRGRA MSMEG_5626|M.smegmatis_MC2_155 PWWNPIRLATQIAYLDIVSNGRYTTIGLGRGVSKGEFAAVGVPREESRQR * .*. * * :* :* ** * * * * Mb3106c|M.bovis_AF2122/97 IDERLRAIIEIWTQEQ-AEFHGTYVDFDPIYCWPKPVT------------ Rv3079c|M.tuberculosis_H37Rv IDERLRAIIEIWTQEQ-AEFHGTYVDFDPIYCWPKPVT------------ Mflv_4097|M.gilvum_PYR-GCK FEEALDVITQIWTTDD-LSYDGRNFSAKGITAHPKPLT------------ Mvan_2248|M.vanbaalenii_PYR-1 FEESLQVIRDAWTTDD-ITFEGKHFSAKGITAHPRPVS------------ MMAR_0236|M.marinum_M MDHCLSVLLQAWGDDP-FEYDGRLINVT-----PKPRT------------ MUL_4877|M.ulcerans_Agy99 MDHCLSVLLQAWGDDP-FEYDGRLINVT-----PKPRT------------ MAV_0338|M.avium_104 MDSLLERMLAVWSGG------GAPAGIC-----TGTWT------------ TH_3375|M.thermoresistible__bu LDDLINVLRQAWSGKP-VEHHGLGTYKTP-PVTPLPFQ------------ MAB_0366|M.abscessus_ATCC_1997 ADEAIAVMRALWSTDGPTSHDGEFYSFRNAYSYPKPVR------------ MSMEG_5626|M.smegmatis_MC2_155 FNETLDILKLAFSGER-FSYEGEIFSFPEMSLRPEPISTDLYDRIYSSSS : : : : * . . Mb3106c|M.bovis_AF2122/97 ----------KPYPPLYVGG-GPANFPRIARLNAGWIAISP--------- Rv3079c|M.tuberculosis_H37Rv ----------KPYPPLYVGG-GPANFPRIARLNAGWIAISP--------- Mflv_4097|M.gilvum_PYR-GCK ----------TPHPPIWVGGNTSAARARVAKYAQGWCPFRAPAMLAQTAR Mvan_2248|M.vanbaalenii_PYR-1 ----------TPHPPIWVGGNTSAARARVARYAQGWCPFRAPAVLAQTAR MMAR_0236|M.marinum_M ----------HPHPILFVGGMSVAAARRAAHFGLPFSPPMAMPELEAVYH MUL_4877|M.ulcerans_Agy99 ----------HPHPILFVGGMSVAAARRAARFGLPFSPPMAMPELEAVYH MAV_0338|M.avium_104 ----------RPHPPLYVGGGARATARRAARFRLPLSLADHLPEIADYYR TH_3375|M.thermoresistible__bu ----------QDGPPVLVGAFAEAGLRRAVRLGNGWLAPELRHWRGLEKR MAB_0366|M.abscessus_ATCC_1997 ----------PQGVPLYIGGHSKAAARRAGRLGSGFQPLGLVG------- MSMEG_5626|M.smegmatis_MC2_155 TAESLEILSRRGMVPLFVGNKPITDAGEEVKKVNTFRAEEGLPPCQPKNV : :* : . : Mb3106c|M.bovis_AF2122/97 --------------------SPQRLSGPLQRLRAMAGG------------ Rv3079c|M.tuberculosis_H37Rv --------------------SPQRLSGPLQRLRAMAGG------------ Mflv_4097|M.gilvum_PYR-GCK TAALE---------------TTEHLAKGIDDLRRRLEDAGR--------- Mvan_2248|M.vanbaalenii_PYR-1 TAALE---------------TVEHLKAGIDDLRRRLEGTGR--------- MMAR_0236|M.marinum_M QELARRNKRGFVYHP-ENGSTVTLLHADPDEAWSRFGGFIMNEATEYSGW MUL_4877|M.ulcerans_Agy99 QELARRNKRGFVYHP-ENGSTVTLLHADPDEAWSRFGGFIMNEATEYSGW MAV_0338|M.avium_104 ELCAEIDLAPVVLMPGPLNRGMIYLHEDPERAWAELGDHILWEAVTYGGW TH_3375|M.thermoresistible__bu VAALGLDSR----TDPFHVAVTVNAFVAARDAWETVRPGVAHVAGQYRSW MAB_0366|M.abscessus_ATCC_1997 ----------------------DDLTAAVGVMRAAAVDAGR--------- MSMEG_5626|M.smegmatis_MC2_155 MFMYCTNSQD---EIEQTEEWIWTANRDVNVHYGFADASNFRGVKGYEAY Mb3106c|M.bovis_AF2122/97 -----------DVPVTVCQWGEA---AAKDLEG---YRHLG--------- Rv3079c|M.tuberculosis_H37Rv -----------DVPVTVCQWGEA---AAKDLEG---YRHLG--------- Mflv_4097|M.gilvum_PYR-GCK ------DPADVDITFTNDAGGAP---GTDDFNA---DEFLAGAEELERAG Mvan_2248|M.vanbaalenii_PYR-1 ------DPFDIDITFTNDAGGSP---GAADFNA---DEFLSGAAELERAG MMAR_0236|M.marinum_M KRADVPRPNEAPAASIAELRGLD---NVQILTP---DQLVGQLQRGRKE- MUL_4877|M.ulcerans_Agy99 KRADVPRPNEAPAASIAELRSLD---NVQILTP---DQLVGQLQRGRKE- MAV_0338|M.avium_104 STDQRSLMHLPGVQTLDEVRASG---RYRFLTP---DQLIAEVRDAPDFG TH_3375|M.thermoresistible__bu LVESGDLPALEGKEFEYEADETG---KPPQFVAGTPEQCVAQLRPWWRIL MAB_0366|M.abscessus_ATCC_1997 ------DPRGLDLVLGHGLHRVD---QAALDQA----AHAGAGR------ MSMEG_5626|M.smegmatis_MC2_155 AAREASATAVLASEVGNQKKGGPPGYHASNLLIGSPETVYEKLKAAQEAC Mb3106c|M.bovis_AF2122/97 V---------ERVLLELPTEPRDPTLRYLDKLQAELARLA---------- Rv3079c|M.tuberculosis_H37Rv V---------ERVLLELPTEPRDPTLRYLDKLQAELARLA---------- Mflv_4097|M.gilvum_PYR-GCK V---------TWLQVNVPGDSLAHAVEAIEGFGETVIAQR---------- Mvan_2248|M.vanbaalenii_PYR-1 V---------TWIQVTVPGDSLAHTLEAIEEFGGSVIGRP---------- MMAR_0236|M.marinum_M ----------VVMNPLIGGLPVEVGWSSLRLLAEEVLPRVADIPDSATTK MUL_4877|M.ulcerans_Agy99 ----------VVMNPLIGGLPVEVGWSSLRLLAEEVLPRVADIPDSATTK MAV_0338|M.avium_104 P---------IVLHPLVGGMPVEEAWQSVQLLTDKVLPALKG-------- TH_3375|M.thermoresistible__bu ARLPEHVQPHLILGMTFPGVSREATFESVRLLAREVVPALNAEE------ MAB_0366|M.abscessus_ATCC_1997 ----------MLLSASRRATTLEAVLEEMAGCATRLELGGPR-------- MSMEG_5626|M.smegmatis_MC2_155 S------FSEVTIVPQFGTMPYEEAMESVKLFAAEVLPAVHDMPAPLHPS : . : : Mb3106c|M.bovis_AF2122/97 -------- Rv3079c|M.tuberculosis_H37Rv -------- Mflv_4097|M.gilvum_PYR-GCK -------- Mvan_2248|M.vanbaalenii_PYR-1 -------- MMAR_0236|M.marinum_M P------- MUL_4877|M.ulcerans_Agy99 P------- MAV_0338|M.avium_104 -------- TH_3375|M.thermoresistible__bu -------- MAB_0366|M.abscessus_ATCC_1997 -------- MSMEG_5626|M.smegmatis_MC2_155 VLPESVTA