For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSVLTRAAQILDALAESNSGLSVRELAEATGLPKSSVHRIVQELTVSQYVMAGGRGGSYQLGPGLLKLGL NNRRQFVAPMRKAIATVAREVNENIDLAMLSGGELVIIEQIATVRNLPTVTVVGRTFALHASSIGKALLS QLPPDQVRNMLPADLEVFTTNTITDVTALLRELDDVRSTGVAFDHEEHDVGISSVAVPLPHPAAIPQAMA IVAPTPRFAQRKTKYVAALDSLTKRANST
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4493 | - | - | 100% (239) | IclR family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0077 | - | 1e-17 | 31.11% (225) | IclR family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_3295 | - | 7e-16 | 26.56% (241) | IclR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1748 | - | 1e-34 | 34.93% (229) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_3174 | - | 4e-23 | 29.17% (216) | regulatory protein, IclR |
M. tuberculosis H37Rv | Rv1719 | - | 1e-34 | 34.93% (229) | transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_4423 | - | 4e-22 | 29.96% (237) | transcriptional regulatory protein |
M. avium 104 | MAV_3024 | - | 2e-18 | 28.96% (221) | transcriptional regulator, IclR family protein |
M. smegmatis MC2 155 | MSMEG_2483 | - | 2e-55 | 48.02% (227) | transcriptional regulator, IclR family protein |
M. thermoresistible (build 8) | TH_3251 | - | 6e-18 | 30.18% (222) | PUTATIVE putative transcriptional regulator |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0155 | - | 2e-23 | 31.00% (229) | regulatory proteins, IclR |
CLUSTAL 2.0.9 multiple sequence alignment MAB_4493|M.abscessus_ATCC_1997 --------------------------MSVLTRAAQILDALAESNSGLSVR MSMEG_2483|M.smegmatis_MC2_155 --------------------------MADIGRSTLVLDALAEASKPLTLS Mb1748|M.bovis_AF2122/97 -------MSAEEQ-------DTRSGGIQVIARAAELLRVLQAHPGGLSQA Rv1719|M.tuberculosis_H37Rv -------MSAEEQ-------DTRSGGIQVIARAAELLRVLQAHPGGLSQA Mvan_0155|M.vanbaalenii_PYR-1 -------MPGADQNGRIDATEGRDDGLQVLRRAAAALDEIATAPGRLRLV MAV_3024|M.avium_104 ------MPAP------------AETPTAVIDRISLVLDAFD-GPGRLTLA TH_3251|M.thermoresistible__bu MTATLDQPTPNTTVKRTGTERTGETPSAVLDRISLVLDAFD-GPGRLTLA Mflv_3174|M.gilvum_PYR-GCK --------MESSSVVGSGRMAERSGGVQSVERAFELMELIGRAGGECSLT MMAR_4423|M.marinum_M MSSGISSMIMGTGNDGGASESDPAPTVQSVDRALLVLELLA-DLGKAGVT : * : : MAB_4493|M.abscessus_ATCC_1997 ELAEATGLPKSSVHRIVQELTVSQYVMAGGRGGSYQLGPGLLKLGLNNR- MSMEG_2483|M.smegmatis_MC2_155 ELATRTGLPRSTVHRIVQSLERSLYLVRGVDRHGYSLGPGLLKFGMNAH- Mb1748|M.bovis_AF2122/97 EIGERVGMARSTVSRILNALEDEGLVASRGARGPYRLGPEITRMATTVR- Rv1719|M.tuberculosis_H37Rv EIGERVGMARSTVSRILNALEDEGLVASRGARGPYRLGPEITRMATTVR- Mvan_0155|M.vanbaalenii_PYR-1 DVGTNLGLAKSTARRLLVALVDVGFAAVDDS-GRYHLGDRLLGLTSADG- MAV_3024|M.avium_104 QIVRRTGLPRSSAHRMLERLVQLRWLRRSGRDYELGMRLVELGSLAVHQ- TH_3251|M.thermoresistible__bu QVVRRTGLPRSSAHRMLERLVQLRWLRRDGRDYELGMRLVELGSLAVHQ- Mflv_3174|M.gilvum_PYR-GCK ELSAESPLPPPTIHRLLRTLVGLGYVR-QLPNRRYALGPRLIRLGEVAN- MMAR_4423|M.marinum_M EVADELGVHKSTASRLITALEARGYVEQLSDRGKYQLGIGVSRLARARSG :: : .: *:: * : MAB_4493|M.abscessus_ATCC_1997 -RQFVAPMRKAIATVAREVNENIDLAMLSGGELVIIEQIATVRNLPTVTV MSMEG_2483|M.smegmatis_MC2_155 -LRLLAGNRPLLARLVREVGENVELAIFSGREVVVVDQLASVNRLHGVTK Mb1748|M.bovis_AF2122/97 -LGVVTEMHPFLTELSRELDETVDLSILDGDRADVVDQVVPPQRLRAVSA Rv1719|M.tuberculosis_H37Rv -LGVVTEMHPFLTELSRELDETVDLSILDGDRADVVDQVVPPQRLRAVSA Mvan_0155|M.vanbaalenii_PYR-1 -STLAARLRPVIERLALATGETVDLSVLRGRQMWFVDQIESAHRLRAVSA MAV_3024|M.avium_104 -DRLVRAATPLLVELHRATGLVVHLAVLDGPDVVYLEKVGDRLNSVIPSR TH_3251|M.thermoresistible__bu -DRLHRAAIPRLHELHAATGLVVHLAVLDGSDVVYLEKVGSRLAAAIPTR Mflv_3174|M.gilvum_PYR-GCK -RQLGAVAGPVLQSLADDLSETASLAVLDGDMVIYTGQVLSAHMMRTNNE MMAR_4423|M.marinum_M HSDLVKLSQDACDKLAADLGETANLAILDENRAVNIVEAVSTAEIALQTW . : . *::: : . MAB_4493|M.abscessus_ATCC_1997 VGRTFALHASSIGKALLSQLPPDQVRNMLPAD-LEVFTTNTITDVTALLR MSMEG_2483|M.smegmatis_MC2_155 VGKSFSLHASCIGLALLAHLPDDQVAGLLSPP-LQRFTEHTVTDLPAIMG Mb1748|M.bovis_AF2122/97 VGESFPLYCCANGKALLAALPPERQARALPSR-LAPLTANTITDRAALRD Rv1719|M.tuberculosis_H37Rv VGESFPLYCCANGKALLAALPPERQARALPSR-LAPLTANTITDRAALRD Mvan_0155|M.vanbaalenii_PYR-1 VGGRFPLHDTANGKAALALMEDD----AIP---------------DGLLD MAV_3024|M.avium_104 VGGRQPAHCTAVGKAILAYRDEAT-DLDLG----ARPTKYSISSAPQLAA TH_3251|M.thermoresistible__bu VGGRRPANCAAVGKAILAYAEDDG-VLSGTGP-LPRNTKYSISDPARLRA Mflv_3174|M.gilvum_PYR-GCK VGKRVGLHTSGVGKAVLAELEDARILKLVTQSGLPAPTENSASTLSAVFA MMAR_4423|M.marinum_M VGQSCPVHATSSGKVLLAGLDADEVRQRVGAT-LDSFTENTIVTIDALEA ** * . *: : MAB_4493|M.abscessus_ATCC_1997 ELDDVRSTGVAFDHEEHDVGISSVAVPLPHP-AAIPQAMAIVAPTPRFAQ MSMEG_2483|M.smegmatis_MC2_155 RLDEVRRTQIAVDTEEHDVGICAVATAFPGP-TGALQAVAVVMPTARFRA Mb1748|M.bovis_AF2122/97 ELNRIRVDGVAYDREEQTEGICAVGAVLRGV-SVELVAVSVPVPAQRFYG Rv1719|M.tuberculosis_H37Rv ELNRIRVDGVAYDREEQTEGICAVGAVLRGV-SVELVAVSVPVPAQRFYG Mvan_0155|M.vanbaalenii_PYR-1 EIAEVRRTGIAYDRDEHTAGISAAGIAVRLP-GGHVVAISVPAPTERFRA MAV_3024|M.avium_104 ELAKVRAHGVAFEREESLLGFGCVAAPIGGP-GEAAAAVSVCGPLQRMAL TH_3251|M.thermoresistible__bu ELAKVRAHGVAFDREESLPGIGCVAAPIGDP-GEAVAAISVCGPMNQMAF Mflv_3174|M.gilvum_PYR-GCK NVERVRAEGYAVDDEEFEIGVRSVAMAVPG--APTPMAIGISGPTARMGK MMAR_4423|M.marinum_M QLAATRAAGWASAREELEIGLNAVAAPVYDSTGRVAAALSVSGPAYRLPA .: * * :* *. ... . *:.: * :: MAB_4493|M.abscessus_ATCC_1997 RKTK-YVAALDSLTKRANST------------------------------ MSMEG_2483|M.smegmatis_MC2_155 KRER-AVESLQRINPLLAHRN----------------------------- Mb1748|M.bovis_AF2122/97 REAE-LAGALLAWVSKVDAWFNGTEDRK---------------------- Rv1719|M.tuberculosis_H37Rv REAE-LAGALLAWVSKVDAWFNGTEDRK---------------------- Mvan_0155|M.vanbaalenii_PYR-1 QEST-IVDALRAAAADP-VWAGGVS------------------------- MAV_3024|M.avium_104 DQRL-AAPVRMTAMGVWRNVEGGPQRVAPTLQRLRPLPPMRPQHPVPK-- TH_3251|M.thermoresistible__bu DHRL-VAPVRMAALGIWRAMEGARQRVVPTLQQVRPLRPGPTAQSLSHSA Mflv_3174|M.gilvum_PYR-GCK DLIARAVPALKKATGVISEALIGAKEA----------------------- MMAR_4423|M.marinum_M ADFEEVAQQTIAAADAVSRGLGWTDRIS---------------------- . MAB_4493|M.abscessus_ATCC_1997 --------------------- MSMEG_2483|M.smegmatis_MC2_155 --------------------- Mb1748|M.bovis_AF2122/97 --------------------- Rv1719|M.tuberculosis_H37Rv --------------------- Mvan_0155|M.vanbaalenii_PYR-1 --------------------- MAV_3024|M.avium_104 -PRPALQYA------------ TH_3251|M.thermoresistible__bu LSHPAQSHPARSHRADTRRFA Mflv_3174|M.gilvum_PYR-GCK --------------------- MMAR_4423|M.marinum_M ---------------------