For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTAISTTATDLDVALGDPFCPANPHGATAILAADERAERALATYQLLADLGLQRMFVPIELGGDLVDIPS LVRVLAPVFGRDMGLGLGFGVTTLMAALNVWHSGDDRQRRRVADQVLTGAPLSVAYHELDHGNDMAANEV RAVATAGGYRLSGRKEVINNASRASAAVVFARTSDRPGRSHSLFLADLDNVRRLDRFRTTALRTAQLGGL DFHDHQVGVEDRIGAEGHGIEIALKSFQISRVVMAGAGLGPVDVALHLAASFARQRVVYGRRVDQIPHAR TNLAIAQSLLLAVEAAVTTAAVGLHTSPQHAGAQAASVKYAAPLLLEYAMEHLAVVLGARFYLRTGPFAL FGKHYRDLAPVGIGHAGSTSCLLALLPQVRHLLQPGTAAALPAPGAQLPRLDFSELVLRSGAPDPIVSWT PAATPLTAPGAGDLIEEQARTLERLRGAAERIPASALGVTAPPAAFDLAEQFTKRFVVAAALAVRESDRT EFADAWVRIAIAAVAAHRRGRAVVDPADVDVVVQRIDRHVAGSRSLLLDGHELPRSIPAL*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3577c | - | - | 100% (551) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_3578c | - | 1e-40 | 30.37% (540) | acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_2085 | - | 2e-15 | 25.93% (324) | acyl CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2743c | fadE20 | 3e-15 | 28.42% (278) | acyl-CoA dehydrogenase FADE20 |
M. gilvum PYR-GCK | Mflv_4943 | - | 1e-15 | 26.74% (258) | acyl-CoA dehydrogenase domain-containing protein |
M. tuberculosis H37Rv | Rv2724c | fadE20 | 2e-15 | 28.42% (278) | acyl-CoA dehydrogenase FADE20 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 2e-09 | 22.77% (325) | putative acyl-CoA dehydrogenase |
M. marinum M | MMAR_1989 | fadE20 | 4e-14 | 27.34% (278) | acyl-CoA dehydrogenase FadE20 |
M. avium 104 | MAV_2703 | - | 3e-18 | 26.95% (308) | putative acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_4832 | - | 3e-13 | 25.36% (343) | acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_2583 | - | 1e-15 | 26.17% (298) | PUTATIVE peptidase S1 and S6, chymotrypsin/Hap |
M. ulcerans Agy99 | MUL_3367 | fadE20 | 2e-14 | 26.98% (278) | acyl-CoA dehydrogenase FadE20 |
M. vanbaalenii PYR-1 | Mvan_1476 | - | 2e-16 | 27.52% (258) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1989|M.marinum_M -----MGSAIKYQRTLFEPEHDLFRESYRGFLERHVAPYHDEWEKAKIVD MUL_3367|M.ulcerans_Agy99 -----MGSAIKYQRTLFEPEHDLFRESYRGFLERHVALYHDEWEKAKIVD Mb2743c|M.bovis_AF2122/97 -----MGSATKYQRTLFEPEHELFRESYRAFLDRHVAAYHDEWEKTKIVD Rv2724c|M.tuberculosis_H37Rv -----MGSATKYQRTLFEPEHELFRESYRAFLDRHVAPYHDEWEKTKIVD TH_2583|M.thermoresistible__bu MSGIDTGRAVFYDRTLFEPEHEMFRDSYRTFLKRSVAPYHQQWEIDGIVD MSMEG_4832|M.smegmatis_MC2_155 -----------MQRNLFTEDHEAFRTLARDFIEKEVVSAYPEWEKAGRMP MAV_2703|M.avium_104 ----MSELFPDYRPSWETDQHRELRKHAAEFFRKEATPNQERWAAQHAVD Mflv_4943|M.gilvum_PYR-GCK --MP-------VDRLLPTDDARDLVELARQIADKVLDPIVDRHEKDETYP Mvan_1476|M.vanbaalenii_PYR-1 --MA-------VDRLLPTDEARELVDLARQIADKALDPIVDQHEKDETYP MLBr_00737|M.leprae_Br4923 --MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFP MAB_3577c|M.abscessus_ATCC_199 ---------MTTAISTTATDLDVALGDPFCPANPHGATAILAADERAERA : MMAR_1989|M.marinum_M RGVWLEAGKQGFLGMAVPEEYGGGGNPDFRYNTIITEETSAGRYSGIGFG MUL_3367|M.ulcerans_Agy99 RGVWLEAGKQGFLGMAVPEEYGGGGNPDFRYNTIITEETSAGRYSGIGFG Mb2743c|M.bovis_AF2122/97 RGVWLEAGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCAGRYSGIGFG Rv2724c|M.tuberculosis_H37Rv RGVWLEAGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCAGRYSGIGFG TH_2583|M.thermoresistible__bu RGVWLEAGKQGFLGMGVPEEHGGGGVADFRYNAIVTEETTAAGFSGLGFA MSMEG_4832|M.smegmatis_MC2_155 RDVFKQMGELGMLGMAIPEEYGGAGIPDYRYNVVLQEEAARALVTLSTVR MAV_2703|M.avium_104 REFWNKAGDAGLLGLDLPEEYGGAG-GDFAMNVVVQEELAYAYDQGFGFA Mflv_4943|M.gilvum_PYR-GCK EGVFATLGEAGLLSLPYPEEWGGGGQPYEVYLQVLEELAARWAAVAVAVS Mvan_1476|M.vanbaalenii_PYR-1 DGVFATLGEAGLLSLPYPEEWGGGGQPYEVYLQVLEELAARWAAVAVAVS MLBr_00737|M.leprae_Br4923 EEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPA MAB_3577c|M.abscessus_ATCC_199 LATYQLLADLGLQRMFVPIELGGDLVDIPSLVRVLAPVFGRDMGLGLGFG *: : * * ** :: MMAR_1989|M.marinum_M LHNDIVAPYLLALATEEQKQRWLPKFCTGEFITAIAMTEPGTGSDLQGIK MUL_3367|M.ulcerans_Agy99 LHNEIVAPYLLALATEEQKQRRLPKFCTGEFITAIAMTEPGTGSDLQGIK Mb2743c|M.bovis_AF2122/97 LHNDIVAPYLLALATEEQKRRWFPNFCTGELTTAIAMTEPGTGSDLQGIT Rv2724c|M.tuberculosis_H37Rv LHNDIVAPYLLALATEEQKRRWFPNFCTGELITAIAMTEPGTGSDLQGIT TH_2583|M.thermoresistible__bu LHNDMVAPYLLRLATAEQKQRWLPRFCSGECITALAMTEPGAGSDLQGIR MSMEG_4832|M.smegmatis_MC2_155 TQLEVILPYFLHYADTEQRQRWFPGLAAGTLLTAIAMTEPGTGSDLAGVR MAV_2703|M.avium_104 VHSPIVAHYIWAYGSDEQRRRWLPKIISGEAVLAIAMTEPGTGSDLQSVK Mflv_4943|M.gilvum_PYR-GCK VH-SLSCHPLMSFGSDEQRQRWLPDMLGGSTIGAYSLSEPQAGSDAAALT Mvan_1476|M.vanbaalenii_PYR-1 VH-SLSCHPLMSFGTDEQRQRWLPEMLGGSTIGAYSLSEPQAGSDAAALT MLBr_00737|M.leprae_Br4923 VN-KLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMR MAB_3577c|M.abscessus_ATCC_199 VTTLMAALNVWHSGDDRQRRRVADQVLTGAPLS-VAYHELDHGNDMAANE : . . . ::: . : * *.* . MMAR_1989|M.marinum_M TRAVKQGDHYLLNGSKTFITNGINADLVIVVAQT---DPEKGAQGFSLLV MUL_3367|M.ulcerans_Agy99 TRAVKQGDHYLLNGSKTFITNGINADLVIVVAQT---DPEKGAQGFSLLV Mb2743c|M.bovis_AF2122/97 TRAVKHGDHYVLNGSKTFITNGINSDLVIVVAQT---DPEKGAQGFSLLV Rv2724c|M.tuberculosis_H37Rv TRAVKHGDHYVLNGSKTFITNGINSDLVIVVAQT---DPEKGAQGFSLLV TH_2583|M.thermoresistible__bu TRAVRDGDGWVLNGSKTFITNGINADLVIVFAQT---DPDKGSMGYSLLV MSMEG_4832|M.smegmatis_MC2_155 TTAVRDGDHYVVNGAKTFITGGIQADLVVVVARTS-TDPDNRRKGLTLLV MAV_2703|M.avium_104 TTARRDGDFYVINGSKTFISNGTHCDLLVIVAKT---DPSKGAAGVSLIV Mflv_4943|M.gilvum_PYR-GCK CRATAVDGGYRITGSKAWITHGGIADFYNLFARTG-----EGSQGISCFL Mvan_1476|M.vanbaalenii_PYR-1 CKAVAADGGYRINGAKAWITHGGIADFYNLFARTG-----EGSQGISCFL MLBr_00737|M.leprae_Br4923 TRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDP---DKGANGISAFI MAB_3577c|M.abscessus_ATCC_199 VRAVATAGGYRLSGRKEVINNASRASAAVVFARTS----DRPGRSHSLFL * . : :.* * *. . . :.* * . . : :: MMAR_1989|M.marinum_M VER--GMEGFERGRHLDKIGLDAQDTAELSFSDVQVPVENLLG-QEGMGF MUL_3367|M.ulcerans_Agy99 VER--GMEGFERGRHLDKIGLDAQDTAELSFSDVQVPVENLLG-QEGMGF Mb2743c|M.bovis_AF2122/97 VER--GMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLG-QEGMGF Rv2724c|M.tuberculosis_H37Rv VER--GMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLG-QEGMGF TH_2583|M.thermoresistible__bu VER--GMAGFERGRRLDKIGMTGQDTAELSFTDVRVPAENLLG-KVGKGL MSMEG_4832|M.smegmatis_MC2_155 VED--GMAGFSRGRELEKMGCKVQDTAELSFTDVRVPVANVLG-EEGEAF MAV_2703|M.avium_104 AETDENLAGFERGRVLAKMGQHAQDTRELFFSDMRVPVANLLGAQEGLGF Mflv_4943|M.gilvum_PYR-GCK VPR--DTEGLTFGKPEEKMGLHAVPTTAAHYDDANLDSDRRIG-TEGQGL Mvan_1476|M.vanbaalenii_PYR-1 VPR--DTEGLTFGKPEEKMGLHAVPTTAAHYENAFVEADRRIG-AEGQGL MLBr_00737|M.leprae_Br4923 VHK--DDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIG-EPGTGF MAB_3577c|M.abscessus_ATCC_199 ADL----DNVRRLDRFRTTALRTAQLGGLDFHDHQVGVEDRIG-AEGHGI . .. . . : . : :* * .: MMAR_1989|M.marinum_M IYLMQNLPQERISIAIMAAAGMESVLDQTLQYTKERKAFGRSIGNFQNSR MUL_3367|M.ulcerans_Agy99 IYLMQNLPQERISIAIMAAAGMESVLDQTLQYTKERKAFGRSIGNFQNSR Mb2743c|M.bovis_AF2122/97 IYLMQNLPQERISIAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSR Rv2724c|M.tuberculosis_H37Rv IYLMQNLPQERISIAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSR TH_2583|M.thermoresistible__bu LYLMQNLPQERLSIAVMSAAAMAATLESTLEYVQQRKAFGRPIGSFQNSR MSMEG_4832|M.smegmatis_MC2_155 SYLGHNLAQERLTVAVGSVAQARSAIDAAIDYTKTRKAFGTPVASFQNTK MAV_2703|M.avium_104 YQLMEQLARERLIIATICAALAEVAVLEAIKYSREREAFGRPIGKFQHTK Mflv_4943|M.gilvum_PYR-GCK QIAFSALDSGRLGIAAVAVGLAQAALDEAVAYSQERTTFGRKIIDHQGLA Mvan_1476|M.vanbaalenii_PYR-1 QIAFSALDSGRLGIAAVAVGLAQAALDAAVDYSQERTTFGRKIIDHQGLA MLBr_00737|M.leprae_Br4923 KTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQ MAB_3577c|M.abscessus_ATCC_199 EIALKSFQISRVVMAGAGLGPVDVALHLAASFARQRVVYGRRVDQIPHAR : * :. . .: : : : * :* : MMAR_1989|M.marinum_M FVLAELATEATMVRIMVDEFIELHLDGKL-TAEQAAMAKWYSTEKQVSLN MUL_3367|M.ulcerans_Agy99 FVLAELATEATMVRIMVDESIELHLDGKL-TAEQAAMAKWYSTEKQVSLN Mb2743c|M.bovis_AF2122/97 FLLAELATEATVVRIMVDEFIKLHLAGKL-TAEQAAMAKWYATEKQVYLN Rv2724c|M.tuberculosis_H37Rv FLLAELATEATVVRIMVDEFIKLHLAGKL-TAEQAAMAKWYATEKQVYLN TH_2583|M.thermoresistible__bu FVLAELATEATAIRIMVDEFVRLHDAGKL-TAEQAAMAKWFATEAFVRLA MSMEG_4832|M.smegmatis_MC2_155 FELAACSAEVEAAQAMLDRAVALHVDGEL-SGADAARVKLFCTEMQARVV MAV_2703|M.avium_104 FVLAECKTEALAIKTMVDYAVGQYLDGKN-DPATASMAKLFAAEKSDQIV Mflv_4943|M.gilvum_PYR-GCK FLLADMAAAVDSARATYLDAARRRDAGLP-YSRHASVAKLVATDAAMKVT Mvan_1476|M.vanbaalenii_PYR-1 FLLADMAAAVDAARATYLDAARRRDAGLP-YSRHASVAKLTATDAAMKVT MLBr_00737|M.leprae_Br4923 FMLADMAMKVEAARLIVYAAAARAERGEPDLGFISAASKCFASDIAMEVT MAB_3577c|M.abscessus_ATCC_199 TNLAIAQSLLLAVEAAVTTAAVGLHTSPQHAGAQAASVKYAAPLLLEYAM ** . . :: * .. MMAR_1989|M.marinum_M DRCLQLHGGYGYMREYPVARAYLDSR----VQTIYGGTTEIMKEIIGRSL MUL_3367|M.ulcerans_Agy99 DRCLQLHGGYGYMREYPVARAYLDSR----VQTIYGGTTEIMKEIIGRSL Mb2743c|M.bovis_AF2122/97 DRCLQLHGGYGYMREYPVARAYLDSR----VQTIYGGTTEIMKEIIGRGL Rv2724c|M.tuberculosis_H37Rv DRCLQLHGGYGYMREYPVARAYLDSR----VQTIYGGTTEIMKEIIGRGL TH_2583|M.thermoresistible__bu DRCLQLHGGYGYMREYPIAKSYLDAR----VQTIYGGTTEIMKEIIGRRL MSMEG_4832|M.smegmatis_MC2_155 DRCLQLFGGYGYMMEYPIARLYTDAR----VARIYAGTSEVMKVIIAKSL MAV_2703|M.avium_104 DKCLQIFGGYGYMTEYPIANMYTASR----VNRKYGRTSEIMKEIISRSL Mflv_4943|M.gilvum_PYR-GCK TDAVQVLGGAGYTRDYRVERYMREAK----ITQIFEGTNQIQRLVISRHL Mvan_1476|M.vanbaalenii_PYR-1 TDAVQVFGGAGYTRDYRVERYMREAK----ITQIFEGTNQIQRLVISRHL MLBr_00737|M.leprae_Br4923 TDAVQLFGGAGYTSDFPVERFMRDAK----ITQIYEGTNQIQRVVMSRAL MAB_3577c|M.abscessus_ATCC_199 EHLAVVLGARFYLRTGPFALFGKHYRDLAPVGIGHAGSTSCLLALLPQVR : *. * . : : . :.. :: : MMAR_1989|M.marinum_M GI------------------------------------------------ MUL_3367|M.ulcerans_Agy99 GI------------------------------------------------ Mb2743c|M.bovis_AF2122/97 GV------------------------------------------------ Rv2724c|M.tuberculosis_H37Rv GV------------------------------------------------ TH_2583|M.thermoresistible__bu CT------------------------------------------------ MSMEG_4832|M.smegmatis_MC2_155 GL------------------------------------------------ MAV_2703|M.avium_104 -------------------------------------------------- Mflv_4943|M.gilvum_PYR-GCK TRG----------------------------------------------- Mvan_1476|M.vanbaalenii_PYR-1 ARD----------------------------------------------- MLBr_00737|M.leprae_Br4923 LR------------------------------------------------ MAB_3577c|M.abscessus_ATCC_199 HLLQPGTAAALPAPGAQLPRLDFSELVLRSGAPDPIVSWTPAATPLTAPG MMAR_1989|M.marinum_M -------------------------------------------------- MUL_3367|M.ulcerans_Agy99 -------------------------------------------------- Mb2743c|M.bovis_AF2122/97 -------------------------------------------------- Rv2724c|M.tuberculosis_H37Rv -------------------------------------------------- TH_2583|M.thermoresistible__bu -------------------------------------------------- MSMEG_4832|M.smegmatis_MC2_155 -------------------------------------------------- MAV_2703|M.avium_104 -------------------------------------------------- Mflv_4943|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1476|M.vanbaalenii_PYR-1 -------------------------------------------------- MLBr_00737|M.leprae_Br4923 -------------------------------------------------- MAB_3577c|M.abscessus_ATCC_199 AGDLIEEQARTLERLRGAAERIPASALGVTAPPAAFDLAEQFTKRFVVAA MMAR_1989|M.marinum_M -------------------------------------------------- MUL_3367|M.ulcerans_Agy99 -------------------------------------------------- Mb2743c|M.bovis_AF2122/97 -------------------------------------------------- Rv2724c|M.tuberculosis_H37Rv -------------------------------------------------- TH_2583|M.thermoresistible__bu -------------------------------------------------- MSMEG_4832|M.smegmatis_MC2_155 -------------------------------------------------- MAV_2703|M.avium_104 -------------------------------------------------- Mflv_4943|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1476|M.vanbaalenii_PYR-1 -------------------------------------------------- MLBr_00737|M.leprae_Br4923 -------------------------------------------------- MAB_3577c|M.abscessus_ATCC_199 ALAVRESDRTEFADAWVRIAIAAVAAHRRGRAVVDPADVDVVVQRIDRHV MMAR_1989|M.marinum_M -------------------- MUL_3367|M.ulcerans_Agy99 -------------------- Mb2743c|M.bovis_AF2122/97 -------------------- Rv2724c|M.tuberculosis_H37Rv -------------------- TH_2583|M.thermoresistible__bu -------------------- MSMEG_4832|M.smegmatis_MC2_155 -------------------- MAV_2703|M.avium_104 -------------------- Mflv_4943|M.gilvum_PYR-GCK -------------------- Mvan_1476|M.vanbaalenii_PYR-1 -------------------- MLBr_00737|M.leprae_Br4923 -------------------- MAB_3577c|M.abscessus_ATCC_199 AGSRSLLLDGHELPRSIPAL