For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTSITLVAPRRFDIVDTVEAALGDARDPDNPAGFAVLAAQDRDDTFPADAIAILDRLRVAEHYVPVADGG RLADYLEVSQLIRVLARRSVTLAVAHAKTFLGAATAWIGARGEQRARLSELVRSGVPVSWGLTEREHGSD LLAGDVAVENGALSGAKWLINNATRGGAVVAIARTSVAGGPRGFDLVLVDKAALSARGAAPTYRHLPKEL THGIRGADISGIEFDGVPVDDTDVLSEPGRGLENVMKALQLTRTLCCSLSVGAAERGLHTAVSFAESREL YGRKLIELPQARRVLTDALADHLLNEVTTCAAIRSIHTLPAELSLHAAAAKYWVPTRTEALLAALRSFVG ARAVLDSDDPTAPALSRIERDHRIVSLFDGNTVVNLTTLITQFPVIGRGDLPADSAALVAAAPDADLSRL SLMSRSGSTLLRTLGDAVIQLDGHDLPDGCRRTASALAAVARDIVRAAADAPRNPAETPNASFALAERLA AAIAGAAAVHVYLAYAGTIDSPLWRDGLWLRLALPRALAGADPAAPPSGPDGDHDAAIAALESLNRSDAG FSVLANVLDDETGDRV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3578c | - | - | 100% (577) | acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_3577c | - | 1e-40 | 30.37% (540) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_3481 | - | 3e-16 | 22.92% (384) | acyl-CoA dehydrogenase FadE |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3302c | fadE25 | 4e-17 | 23.66% (355) | acyl-CoA dehydrogenase FADE25 |
M. gilvum PYR-GCK | Mflv_0446 | - | 4e-15 | 29.20% (250) | butyryl-CoA dehydrogenase |
M. tuberculosis H37Rv | Rv3274c | fadE25 | 4e-17 | 23.66% (355) | acyl-CoA dehydrogenase FADE25 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 1e-17 | 24.72% (352) | putative acyl-CoA dehydrogenase |
M. marinum M | MMAR_1262 | fadE25 | 9e-16 | 23.14% (350) | acyl-CoA dehydrogenase FadE25 |
M. avium 104 | MAV_4243 | - | 8e-15 | 24.05% (262) | acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_1821 | - | 1e-14 | 22.44% (352) | acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_3846 | - | 1e-16 | 23.80% (353) | PUTATIVE acyl-CoA dehydrogenase |
M. ulcerans Agy99 | MUL_2626 | fadE25 | 4e-16 | 23.14% (350) | acyl-CoA dehydrogenase FadE25 |
M. vanbaalenii PYR-1 | Mvan_1719 | - | 1e-16 | 22.86% (350) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1262|M.marinum_M MAGWAGNPSFDLFQLPEEHQELRAAIRALAEKEIAPHAADVDENSRFPQE MUL_2626|M.ulcerans_Agy99 MAGWAGNPSFDLFQLPEEHQELRAAIRALAEKEIAPHAADVDENSRFPQE Mvan_1719|M.vanbaalenii_PYR-1 MASWAGNPSFDLFQLPEEHQELRAAIRALAEKEIAPHAADVDENSRFPQE MSMEG_1821|M.smegmatis_MC2_155 MAAWGGNPSFDLFQLPEEHQELRAAIRALAEKEIAPHAADVDENARFPQE MAV_4243|M.avium_104 MAGWAGNPDFDLFQLPEEHQELRAAIRALAEKEIAPHAADVDENSRFPQE Mb3302c|M.bovis_AF2122/97 MVGWAGNPSFDLFKLPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEE Rv3274c|M.tuberculosis_H37Rv MVGWAGNPSFDLFKLPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEE MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFPEE TH_3846|M.thermoresistible__bu MAAWSGNPSFELFQLPEEHIALREAIRALAEKEIAPYAAEVDEKARFPEE Mflv_0446|M.gilvum_PYR-GCK MVDG----------LSSEEAMLVQTVRAFIDRDVKPTVRDVEHANTYPEA MAB_3578c|M.abscessus_ATCC_199 MTTSITLVAPRRFDIVDTVEAALGDARDPDNPAGFAVLAAQDRDDTFPAD *. : . * : . :. :* MMAR_1262|M.marinum_M ALDALNASGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN MUL_2626|M.ulcerans_Agy99 ALDALNASGFNALHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN Mvan_1719|M.vanbaalenii_PYR-1 ALDALNASGFNAVHVPEEFGGQGADSVAACIVIEEVARVDASASLIPAVN MSMEG_1821|M.smegmatis_MC2_155 ALDALNASGFNAVHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN MAV_4243|M.avium_104 ALEALNAAGFNAVHVPEEYGGQGADSVAACIVIEEVARVDTSASLIPAVN Mb3302c|M.bovis_AF2122/97 ALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVN Rv3274c|M.tuberculosis_H37Rv ALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVN MLBr_00737|M.leprae_Br4923 ALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN TH_3846|M.thermoresistible__bu ALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCSASLIPAVN Mflv_0446|M.gilvum_PYR-GCK WIDQMKQIGIYGLAVPESYGGTPVSTRCYVLVTQELARGWMSLAGAMGGH MAB_3578c|M.abscessus_ATCC_199 AIAILDRLRVAEHYVPVADGGRLADYLEVSQLIRVLARRSVTLAVAHAKT : :. . :* ** .. : . :** : : . MMAR_1262|M.marinum_M KLGTMGLILRGSDDLKKQVLPSLADGAAMASYALSEREAGSDAGAMRTRA MUL_2626|M.ulcerans_Agy99 KLGTMGLILRGSDELKKQVLPSLADGAAMASYALSEREAGSDAGAMRTRA Mvan_1719|M.vanbaalenii_PYR-1 KLGTMGLILRGSDELKKKVLPSIASGEAMASYALSEREAGSDAAAMRTRA MSMEG_1821|M.smegmatis_MC2_155 KLGTMGLILRGSDELKKQVLPQLASGAAMASYALSEREAGSDAASMRTRA MAV_4243|M.avium_104 KLGTMGLILRGSDELKKQVLPSIADGSAMASYALSEREAGSDAASMRTRA Mb3302c|M.bovis_AF2122/97 KLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRA Rv3274c|M.tuberculosis_H37Rv KLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRA MLBr_00737|M.leprae_Br4923 KLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRA TH_3846|M.thermoresistible__bu KLGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRA Mflv_0446|M.gilvum_PYR-GCK TVVAKLLTLFGTEEQKQRYLPAMATGEIRATMALTEPGGGSDLQAMGTVA MAB_3578c|M.abscessus_ATCC_199 FLGAATAWIGARGE-QRARLSELVRSGVPVSWGLTEREHGSDLLAGDVAV : : : . : :: *. :. .: .*:* *** : . . MMAR_1262|M.marinum_M KADGDDWILNGTKCWITNGGKSSWYTVMAVTDPEKG--ANGISAFMVHKD MUL_2626|M.ulcerans_Agy99 KADGDDWILNGTKCWITNGGKSSWYTVMAVTDPENG--ANGISAFVVHKD Mvan_1719|M.vanbaalenii_PYR-1 KADGDDWILNGAKCWITNGGKSSWYTVMAVTDPDKG--ANGISAFMVHID MSMEG_1821|M.smegmatis_MC2_155 RADGDDWVLNGTKCWITNGGKSSWYTVMAVTDPDKG--ANGISAFMVHQD MAV_4243|M.avium_104 RADGDDWILNGAKCWITNGGKSSWYTVMAVTDPDKG--ANGISSFMVHKD Mb3302c|M.bovis_AF2122/97 KADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRG--ANGISAFMVHKD Rv3274c|M.tuberculosis_H37Rv KADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRG--ANGISAFMVHKD MLBr_00737|M.leprae_Br4923 KADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKG--ANGISAFIVHKD TH_3846|M.thermoresistible__bu VADGDDWILNGSKCWITNGGKSTWYTVMAVTDPDKG--ANGISAFMVHKD Mflv_0446|M.gilvum_PYR-GCK RRDGDDLVLSGTKTWISNARRSGLIALLCKTDPDATPKHSGISVVLVDNP MAB_3578c|M.abscessus_ATCC_199 ENG----ALSGAKWLINNATRGGAVVAIARTSVAGG--PRGFDLVLVDKA . *.* * *.*. :. . :. *. *:. .:*. MMAR_1262|M.marinum_M -------DEGFVVGPKERKLGIKGSPTTELYFENCRVPGDRMIG-EPGTG MUL_2626|M.ulcerans_Agy99 -------DEGFVVGPKERKLGIKGSPTTELYFENCRVPGDRMIG-EPGTG Mvan_1719|M.vanbaalenii_PYR-1 -------DEGFTIGPKERKLGIKGSPTTELYFENCRIPGDRIIG-EPGTG MSMEG_1821|M.smegmatis_MC2_155 -------DEGFSVGPKERKLGIKGSPTTELYFENCRIPGDRIIG-EPGTG MAV_4243|M.avium_104 -------DEGFTVGPKEKKLGIKGSPTTELYFENCRIPGDRIIG-EPGTG Mb3302c|M.bovis_AF2122/97 -------DEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIG-EPGTG Rv3274c|M.tuberculosis_H37Rv -------DEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIG-EPGTG MLBr_00737|M.leprae_Br4923 -------DEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIG-EPGTG TH_3846|M.thermoresistible__bu -------DEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIG-EPGTG Mflv_0446|M.gilvum_PYR-GCK -------TPGLTVSRDLPKLGYKGVESCELAFDACRVPASAILGGTPGKG MAB_3578c|M.abscessus_ATCC_199 ALSARGAAPTYRHLPKELTHGIRGADISGIEFDGVPVDDTDVLS-EPGRG . . * :* : *: : ::. ** * MMAR_1262|M.marinum_M FKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGKSISDFQAV MUL_2626|M.ulcerans_Agy99 FKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGKSISDFQAV Mvan_1719|M.vanbaalenii_PYR-1 FKTALATLDHTRPTIGAQAVGIAQGALDASLEYVKDRKQFGKSISEFQAV MSMEG_1821|M.smegmatis_MC2_155 FKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGTSISDFQAV MAV_4243|M.avium_104 FKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGV Mb3302c|M.bovis_AF2122/97 FKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAV Rv3274c|M.tuberculosis_H37Rv FKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAV MLBr_00737|M.leprae_Br4923 FKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSI TH_3846|M.thermoresistible__bu FKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGV Mflv_0446|M.gilvum_PYR-GCK FSQMMKGLETGRIQVASRALGVASAALEDALAYAQDRESFGRPIWKHQAV MAB_3578c|M.abscessus_ATCC_199 LENVMKALQLTRTLCCSLSVGAAERGLHTAVSFAESRELYGRKLIELPQA :. : *: * : ::* *. .*. :: :.:.*: :* : MMAR_1262|M.marinum_M QFMLADMAMKVESARLMVYSAAARAERGESNLGFISAASKCLASDVAMEV MUL_2626|M.ulcerans_Agy99 QFMLADMAMKVESARLMVYSAAARAERGESNLGFISAASKCLASDVAMEV Mvan_1719|M.vanbaalenii_PYR-1 QFMLADMAMKVEAARLMVYSAAARAERGEGNLGFISAASKCLASDVAMEV MSMEG_1821|M.smegmatis_MC2_155 QFMLADMAMKVESARLMVYHAAARAERGEKNLGFISAASKCLASDIAMEV MAV_4243|M.avium_104 QFMLADMAMKVESARLMVYHAAARAERGESHLGFISAASKCLASDVAMEV Mb3302c|M.bovis_AF2122/97 QFMLADMAMKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEV Rv3274c|M.tuberculosis_H37Rv QFMLADMAMKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEV MLBr_00737|M.leprae_Br4923 QFMLADMAMKVEAARLIVYAAAARAERGEPDLGFISAASKCFASDIAMEV TH_3846|M.thermoresistible__bu QFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCFASDVAMEV Mflv_0446|M.gilvum_PYR-GCK GHYLADMATKLTAARQLTLYAADRYDSGE-RADMEAGMAKLFASEVAMEI MAB_3578c|M.abscessus_ATCC_199 RRVLTDALADHLLNEVTTCAAIRSIHTLPAELSLHAAAAKYWVPTRTEAL *:* . . . * . .: :. :* .. : : MMAR_1262|M.marinum_M TTDAVQLFGG-----AGYTVDFPVERMMRDAKITQIYEGTNQIQRVVMSR MUL_2626|M.ulcerans_Agy99 TTDAVQLFGG-----AGYTVDFPVERMMRDAKITQIYEGTNQIQRVVMSR Mvan_1719|M.vanbaalenii_PYR-1 TTDAVQLFGG-----AGYTVDFPVERMMRDAKITQIYEGTNQIQRVVMSR MSMEG_1821|M.smegmatis_MC2_155 TTDAVQLFGG-----AGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSR MAV_4243|M.avium_104 TTDAVQLFGG-----YGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSR Mb3302c|M.bovis_AF2122/97 TTDAVQLFGG-----AGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSR Rv3274c|M.tuberculosis_H37Rv TTDAVQLFGG-----AGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSR MLBr_00737|M.leprae_Br4923 TTDAVQLFGG-----AGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMSR TH_3846|M.thermoresistible__bu TTDAVQLFGG-----YGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSR Mflv_0446|M.gilvum_PYR-GCK ALNAVRIHGG-----YGYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIAG MAB_3578c|M.abscessus_ATCC_199 LAALRSFVGARAVLDSDDPTAPALSRIERDHRIVSLFDGNTVVNLTTLIT : *. . . :.* ** : : :*.. :: .: MMAR_1262|M.marinum_M ALLR---------------------------------------------- MUL_2626|M.ulcerans_Agy99 ALLR---------------------------------------------- Mvan_1719|M.vanbaalenii_PYR-1 ALLK---------------------------------------------- MSMEG_1821|M.smegmatis_MC2_155 ALLR---------------------------------------------- MAV_4243|M.avium_104 ALLR---------------------------------------------- Mb3302c|M.bovis_AF2122/97 ALLR---------------------------------------------- Rv3274c|M.tuberculosis_H37Rv ALLR---------------------------------------------- MLBr_00737|M.leprae_Br4923 ALLR---------------------------------------------- TH_3846|M.thermoresistible__bu ALLR---------------------------------------------- Mflv_0446|M.gilvum_PYR-GCK QLVARGGI------------------------------------------ MAB_3578c|M.abscessus_ATCC_199 QFPVIGRGDLPADSAALVAAAPDADLSRLSLMSRSGSTLLRTLGDAVIQL : MMAR_1262|M.marinum_M -------------------------------------------------- MUL_2626|M.ulcerans_Agy99 -------------------------------------------------- Mvan_1719|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1821|M.smegmatis_MC2_155 -------------------------------------------------- MAV_4243|M.avium_104 -------------------------------------------------- Mb3302c|M.bovis_AF2122/97 -------------------------------------------------- Rv3274c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00737|M.leprae_Br4923 -------------------------------------------------- TH_3846|M.thermoresistible__bu -------------------------------------------------- Mflv_0446|M.gilvum_PYR-GCK -------------------------------------------------- MAB_3578c|M.abscessus_ATCC_199 DGHDLPDGCRRTASALAAVARDIVRAAADAPRNPAETPNASFALAERLAA MMAR_1262|M.marinum_M -------------------------------------------------- MUL_2626|M.ulcerans_Agy99 -------------------------------------------------- Mvan_1719|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1821|M.smegmatis_MC2_155 -------------------------------------------------- MAV_4243|M.avium_104 -------------------------------------------------- Mb3302c|M.bovis_AF2122/97 -------------------------------------------------- Rv3274c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00737|M.leprae_Br4923 -------------------------------------------------- TH_3846|M.thermoresistible__bu -------------------------------------------------- Mflv_0446|M.gilvum_PYR-GCK -------------------------------------------------- MAB_3578c|M.abscessus_ATCC_199 AIAGAAAVHVYLAYAGTIDSPLWRDGLWLRLALPRALAGADPAAPPSGPD MMAR_1262|M.marinum_M ----------------------------------- MUL_2626|M.ulcerans_Agy99 ----------------------------------- Mvan_1719|M.vanbaalenii_PYR-1 ----------------------------------- MSMEG_1821|M.smegmatis_MC2_155 ----------------------------------- MAV_4243|M.avium_104 ----------------------------------- Mb3302c|M.bovis_AF2122/97 ----------------------------------- Rv3274c|M.tuberculosis_H37Rv ----------------------------------- MLBr_00737|M.leprae_Br4923 ----------------------------------- TH_3846|M.thermoresistible__bu ----------------------------------- Mflv_0446|M.gilvum_PYR-GCK ----------------------------------- MAB_3578c|M.abscessus_ATCC_199 GDHDAAIAALESLNRSDAGFSVLANVLDDETGDRV