For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSTQYATAATELTELLGSTVAGSWQGPSAMQYAA SHAPYLAWLTQQSAMSATNAVLHETSAAAYTTALAAMPTLAELAANHMIHGVLLATNFFGINTIPIALNE ADYIRMWIQAATTMGVYQGVSSAALAATTPTQPSPMIMAPGGEMSRMSADMMSMAAQPQAAESGSALDSS NNIMDQLMRFMTNPLGTLQDMIEDFMRNPVAAFFAWFPLLFFIAYEAFFIPFGFTFWGVLLSAPAWLPIV LGLALSALVPPAGIEEPGQEDEPGREPTRIERRSPQQDLQLAHVPSGSPTPGGSTTTTVTSGGSAPPAPA PATATPAYMVYAVQEDPPAARFGPTLNEGSGAKAPAAGISAAAAAAASARSRARRKRAARIKDPAPQFMD MNSSVAPDFSESAARQTTGVGASARGAGRLGFAGTAPAAAGTTAAAGLVERDSGTAEALDGARTVPMLPT SWGTDSEHGPDRPAEGGSST
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0047 | - | - | 100% (510) | PPE family protein |
M. abscessus ATCC 19977 | MAB_2230c | - | 0.0 | 73.62% (527) | PPE family protein |
M. abscessus ATCC 19977 | MAB_2254c | - | e-167 | 61.24% (516) | PPE family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0294 | PPE4 | 1e-106 | 44.08% (524) | PPE family protein |
M. gilvum PYR-GCK | Mflv_0325 | - | 1e-111 | 44.65% (542) | PPE protein |
M. tuberculosis H37Rv | Rv0286 | PPE4 | 1e-106 | 44.08% (524) | PPE family protein |
M. leprae Br4923 | MLBr_01991 | PPE | 2e-69 | 35.35% (512) | PPE-family protein |
M. marinum M | MMAR_0545 | - | 1e-105 | 44.57% (525) | PPE family protein, PPE4 |
M. avium 104 | MAV_4867 | - | 1e-120 | 50.00% (514) | PPE family protein |
M. smegmatis MC2 155 | MSMEG_0619 | - | 1e-117 | 46.80% (532) | PPE family protein |
M. thermoresistible (build 8) | TH_3569 | - | 4e-90 | 50.15% (337) | PUTATIVE PPE protein |
M. ulcerans Agy99 | MUL_1208 | - | 1e-105 | 44.19% (525) | PPE family protein |
M. vanbaalenii PYR-1 | Mvan_0415 | - | 1e-114 | 46.20% (526) | PPE protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb0294|M.bovis_AF2122/97 ----------MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAE Rv0286|M.tuberculosis_H37Rv ----------MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAE MMAR_0545|M.marinum_M -------MAVAAGPIWIASPPEVHSAMLSSGPGPASLLAAAGVWSALSAE MUL_1208|M.ulcerans_Agy99 -------MAVAAGPIWIASPPEVHSAMLSSGPGPASLLAAAGVWSALSAE MAV_4867|M.avium_104 -------MTSPFGPIWMASPPEVHSALLSAGPGPGPLLAAAGAWTSLSAQ Mflv_0325|M.gilvum_PYR-GCK MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE Mvan_0415|M.vanbaalenii_PYR-1 ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE MSMEG_0619|M.smegmatis_MC2_155 ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE TH_3569|M.thermoresistible__bu ---------MMTAPIWMALPPEVHSALLSSGPGPGSLLAAASAWHALSAE MAB_0047|M.abscessus_ATCC_1997 ----------MSAPIWMASPPEVHSALLSAGPGPGALLAAAAQWQALSTQ MLBr_01991|M.leprae_Br4923 ----------------MAIPPEVHSVLLSAGQGAESLLVAATQWQELSKQ :* ****** :** * *. .::.*. * ** : Mb0294|M.bovis_AF2122/97 YASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYVAWLTQASADAAGAA Rv0286|M.tuberculosis_H37Rv YASTAAELSGLLGAVPGWAWQGPSAEWYVAAHLPYVAWLTQASADAAGAA MMAR_0545|M.marinum_M YALTAAELSEVLAAVQAGAWQGPSGFQYVAAHLPYVAWLLQASADGAGKA MUL_1208|M.ulcerans_Agy99 YALTAAELSEVLAAVQAGAWQGPSGFQYVAAHLPYVAWLLQASADGAGKA MAV_4867|M.avium_104 YATAAAELSALLGEAQAGSWEGESAAQYAAAHLPYLAWLQQASADSAGAA Mflv_0325|M.gilvum_PYR-GCK YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA Mvan_0415|M.vanbaalenii_PYR-1 YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA MSMEG_0619|M.smegmatis_MC2_155 YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA TH_3569|M.thermoresistible__bu YASAAAELSSVLANVQAGSWEGPSAERYVAAHAPYLAWLTQQSANSAATA MAB_0047|M.abscessus_ATCC_1997 YATAATELTELLGSTVAGSWQGPSAMQYAASHAPYLAWLTQQSAMSATNA MLBr_01991|M.leprae_Br4923 YTYAAAELTRLLTHVQATSWRGTSATRFVAAHGAYLVWLEQTSINNAITA *: :*:**: :* . . :*.* *. :.*:* .*: ** * * * * Mb0294|M.bovis_AF2122/97 AQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPITLNE Rv0286|M.tuberculosis_H37Rv AQHEAAAAAYTTALAAMPTLAELAANHVIHTVLVATNFFGINTIPITLNE MMAR_0545|M.marinum_M AEHEAAAVAYSGALAAMPTLTELGANHALHGVLVATNFFGLNAIPIALNE MUL_1208|M.ulcerans_Agy99 AEHEAAAVAYSGALAAMPTLTELGANHALHGVLVATNFFGLNAIPIALNE MAV_4867|M.avium_104 AQQEVAATAYTTALAAMPTLAELAANHTIHGVLLATNFFGINTIPIAVNE Mflv_0325|M.gilvum_PYR-GCK VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE Mvan_0415|M.vanbaalenii_PYR-1 AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE MSMEG_0619|M.smegmatis_MC2_155 VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE TH_3569|M.thermoresistible__bu GRHETAAAAYSTALATMPTMAELTLNKTTHAVLVATNFLGINTIPIALNE MAB_0047|M.abscessus_ATCC_1997 VLHETSAAAYTTALAAMPTLAELAANHMIHGVLLATNFFGINTIPIALNE MLBr_01991|M.leprae_Br4923 KQHEIAAIAYSSALAAMPTLAELTANRATRGFLIATNFFGINTIPIALNE :: :* **: ***:***:.** *: : .*:.***:*:*:***::.* Mb0294|M.bovis_AF2122/97 ADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGG------- Rv0286|M.tuberculosis_H37Rv ADYVRMWLQAAAVMGLYQAASGAALASAPRTVPAPTVMNPGGG------- MMAR_0545|M.marinum_M ADYVRMWVQAATTMGLYQATAGAALASAPRTGPPPKVVNPGGGQVAHLAA MUL_1208|M.ulcerans_Agy99 ADYVRMWVQAATTMGLYQATAGAALASAPRTGPPPKVVNPGGGQVAHLAA MAV_4867|M.avium_104 ADYARMWVQAATTMGTYQAVAGSALAAAPRTAPAPSIVKPGGE------- Mflv_0325|M.gilvum_PYR-GCK ADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLPGVG-EAGRAA Mvan_0415|M.vanbaalenii_PYR-1 ADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAPGVG-EAGRAA MSMEG_0619|M.smegmatis_MC2_155 ADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKPGVG-EAGSAS TH_3569|M.thermoresistible__bu ADYVRMWIQAATSMSTYQAVAGTAVMSAPASSPAPLLLAPGVS-EAADAM MAB_0047|M.abscessus_ATCC_1997 ADYIRMWIQAATTMGVYQGVSSAALAATTPTQPSPMIMAPGGE--MSRMS MLBr_01991|M.leprae_Br4923 ADYVRMWVQAADTMATYQAISEAVTATILPTQVAPPILAPGSA------- *** ***:*** *. **. : :. : : .* :: ** Mb0294|M.bovis_AF2122/97 -------AASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDP Rv0286|M.tuberculosis_H37Rv -------AASTVGAVNPWQWLLALLQQLWNAYTGFYGWMLQLIWQFLQDP MMAR_0545|M.marinum_M DAAQAQSGAAAAGGSDPWQLLWQLLQYLWNAYTGFNTWMFDLIWEFLQDP MUL_1208|M.ulcerans_Agy99 DAARAQSGAAAAGGSDPWQLLWQLLQYLWNAYTGFNTWMFDLIWEFLQDP MAV_4867|M.avium_104 ----ANNLAANAAQNSSGDWWQNFIQQLS---------------QFFQN- Mflv_0325|M.gilvum_PYR-GCK ADMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRFLFEPIFNFLRDP Mvan_0415|M.vanbaalenii_PYR-1 ADVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRFLFEPIFDFLRDP MSMEG_0619|M.smegmatis_MC2_155 ASVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGGQ-AILDFLKDP TH_3569|M.thermoresistible__bu ATTQQIGSQATAADSGTALNLSDLIANLLQYYQDYLDQLFGPIVDFLRDP MAB_0047|M.abscessus_ATCC_1997 ADMMSMAAQPQAAESGSALDSSNNIMDQLMR--------------FMTNP MLBr_01991|M.leprae_Br4923 -------------TQNVLQSVPDWIVQLLTD-----------ILDFIADP . : *: : Mb0294|M.bovis_AF2122/97 IGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSP Rv0286|M.tuberculosis_H37Rv IGNSIKIIIAFLTNPIQALITYGPLLFALGYQIFFNLVGWPTWGMILSSP MMAR_0545|M.marinum_M IGNTIKIIIAFLTNPLQAIITYGPLLFALSYQIFFNLVGWPTWALILSSP MUL_1208|M.ulcerans_Agy99 IGNTIKIIIAFLTNPLQAIITYGPLLFALSYQIFFNLVGWPTWALILSSP MAV_4867|M.avium_104 ---IQKMLQDFWANLPAFLAANGPLLFFVAYQVFFNAVGWPTWGAILTAP Mflv_0325|M.gilvum_PYR-GCK IGNTFALITDFLTNPVQALITWGPFLLAVVYQAVSWVGASILYPSLFLLP Mvan_0415|M.vanbaalenii_PYR-1 LGNTIKLITDFLTNPAQALITWGPFLAAVAYQAVSWVGASILYPSLLLLP MSMEG_0619|M.smegmatis_MC2_155 LGNLGRLLTDFMTNPAGALATWWPFLFGVAYQVFFNLVGWPTWGMIFASP TH_3569|M.thermoresistible__bu IGNLFQLIDDFLTNPAGALVTWWPLLFAVAYQVFTNLVGWPTWAMILASP MAB_0047|M.abscessus_ATCC_1997 LGTLQDMIEDFMRNPVAAFFAWFPLLFFIAYEAFFIPFGFTFWGVLLSAP MLBr_01991|M.leprae_Br4923 YKYFLRFFQRLGFRPAIAVVLA---IIALQLYDFLWYPYYASYGMLLL-P :: : . . : : . : :: * Mb0294|M.bovis_AF2122/97 FLLPAGLGLGLAAIAFLPIVLAP--AVIPPASTPLAAAAVAAGSVWPAVS Rv0286|M.tuberculosis_H37Rv FLLPAGLGLGLAAIAFLPIVLAP--AVIPPASTPLAAAAVAAGSVWPAVS MMAR_0545|M.marinum_M FLLPAALGLALSAIAFTPIQIA---AEVPAAAAPLAAAAVTAKSVFPAAS MUL_1208|M.ulcerans_Agy99 FLLPAALGLALSAIAFTPIQIA---AEVPAAAAPLAAAAVTAKSVFPAAS MAV_4867|M.avium_104 FLLPLLLGIGLSSLLAAPAEIAP--VAAPAAITPVLASNKPP-TLPAAVA Mflv_0325|M.gilvum_PYR-GCK LLATTLAIVAGVGQHLLSLLNTP-PAEEAAEEPAPAQSAPSRPDQQSFPA Mvan_0415|M.vanbaalenii_PYR-1 LVATTLAIVLGVGAYLLENLPAP-AEDAPAEEPAASSPAPTRADQPSPAI MSMEG_0619|M.smegmatis_MC2_155 FLIPALAALGITGLVLLIDHVLNNPVDVPAEDEAPQEVAAAPRTDQPLAV TH_3569|M.thermoresistible__bu VLIPLAITLGVAGLVMIADQAQP-----PAEEAAPEEDVAAP-------- MAB_0047|M.abscessus_ATCC_1997 AWLPIVLGLALSALVPPAGIEEPGQEDEPGREPTRIE-RRSPQQDLQLAH MLBr_01991|M.leprae_Br4923 FFAPALSVLGTLSVLWNGQLSAG-----LPPNPAGSHPDNNAGPRIHVGV . : . . Mb0294|M.bovis_AF2122/97 MAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSL Rv0286|M.tuberculosis_H37Rv MAVTGAGTAGAATPAAGAAPSAGAAPAPAAPATASFAYAVGGSGDWGPSL MMAR_0545|M.marinum_M LASPGTGSAGAPASGAGAGAPGSAPPGPAAPAPASFLYAVGGSGDWGPSL MUL_1208|M.ulcerans_Agy99 LASPGTGSAGAPASGAGAGAPGTAPPGPGAPAPASFLYAVGGSGDWGPSL MAV_4867|M.avium_104 LAPSVATPAGAPASTVAAGSGAAAAPGP-AAAAGNFAYLVAFGGDPDTGV Mflv_0325|M.gilvum_PYR-GCK TMSAPPPPSGAPIAANTVSAGSPPAPGAPAAAAATFVPYVVAGRDPYEGF Mvan_0415|M.vanbaalenii_PYR-1 AVSAPPPPSSAAATVGTVATGTAPAPGAPAAATASFVPYAVAGRDPGTGF MSMEG_0619|M.smegmatis_MC2_155 GISPAGVPGSAATAAAPAPAPAGTTVAAPAPAAATFVPYAVANRDPGEGF TH_3569|M.thermoresistible__bu -----------VRAEPQNPLPLTXXX------------------------ MAB_0047|M.abscessus_ATCC_1997 VPSGSPTPGGSTTTTVTSGGSAPPAPAPATATPAYMVYAVQED-PPAARF MLBr_01991|M.leprae_Br4923 APPASATSSGNSYTSNSAPSTSASATTDNPLSSPSIRYAIPGLSPPEVSS . Mb0294|M.bovis_AF2122/97 GPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRS----ELRDYGDE Rv0286|M.tuberculosis_H37Rv GPTVGGRGGIKAPAATVPAAAAAAATRGQSRARRRRRS----ELRDYGDE MMAR_0545|M.marinum_M GPTVGGRSGAKAPAATIPAAGAAAASRASARSRRRRRT----EMRDYGDE MUL_1208|M.ulcerans_Agy99 GPTVGGRSGAKAPAVTIPAAGAAAASRASARSRRRRRT----EMRDYGDE MAV_4867|M.avium_104 GPTLSGRGGAKAPAATIPAAGAAAPARAEARARRRRRA----ALHDYSDE Mflv_0325|M.gilvum_PYR-GCK SPTVRDSTGAKAPAGTIPAAASGIAASAAERRKRRRRQKEEIKGRGYADA Mvan_0415|M.vanbaalenii_PYR-1 SPTVRDSTSAKAPASGIPAAASGVAASAAERRKRRRRQKDEIAGRAYADA MSMEG_0619|M.smegmatis_MC2_155 TPTLGNKSQVAAPASGVPAAASGVAASLASRRKRRRKKGAQIEERGYADA TH_3569|M.thermoresistible__bu -------------------------------------------------- MAB_0047|M.abscessus_ATCC_1997 GPTLNEGSGAKAPAAGISAAAAAAAS-ARSRARRKRAAR----IKDPAPQ MLBr_01991|M.leprae_Br4923 GPKAGTKS-PDTATNTIGITAAARTNSPSARAHRKRGNKTRGGARGYRYE Mb0294|M.bovis_AF2122/97 FLDMDS----DSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVG- Rv0286|M.tuberculosis_H37Rv FLDMDS----DSGFGPSTGDHGAQASERGAGTLGFAGTATKERRVRAVG- MMAR_0545|M.marinum_M FLDMDA----NGVTGPAATDDAARASERGAGQFGFAGTVSTEAVLQAAG- MUL_1208|M.ulcerans_Agy99 FLDMDA----NGVTGPAATDDAARASERGAGQFGFAGTVSTEAVLQAAG- MAV_4867|M.avium_104 FLDMDSGFGVPPDYGAEEELAAAVASGQGAGTLGFAGTQQRRKAFQAAG- Mflv_0325|M.gilvum_PYR-GCK YADYEEL---PDDGPPEQPAPRVTASTRGAGPMGFAGTVSRGD-EQAGG- Mvan_0415|M.vanbaalenii_PYR-1 YADYEPE---PDDEPPVRQEPRIAATERGAGPMGFAGTVSRDA-AQAGG- MSMEG_0619|M.smegmatis_MC2_155 YMDYEE----PDEDPAPQPEPRVRASERGSDAMGFTGTVTRHD-VTAAG- TH_3569|M.thermoresistible__bu -------------------------------------------------- MAB_0047|M.abscessus_ATCC_1997 FMDMNSSVAPDFSESAARQTTGVGASARGAGRLGFAGTAPAAAGTTAAAG MLBr_01991|M.leprae_Br4923 FVEGTATMADTVDAPDHSEPTSHTISNHSAGPIGFAGTVPTTA------- Mb0294|M.bovis_AF2122/97 ---LTALAGDEFGNGPRMPMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDS Rv0286|M.tuberculosis_H37Rv ---LTALAGDEFGNGPRMPMVPGTWEQGSNEPEAPDGSGRGGGDGLPHDS MMAR_0545|M.marinum_M ---LTELAVDEFGNGPRMPMVPGSWDS----PQE------GREDGLQSE- MUL_1208|M.ulcerans_Agy99 ---LTELAVDEFGNGPRMPMVPGSWDS----PQE------GREDGLQSE- MAV_4867|M.avium_104 ---LTKLADDDFGGSPRMPMVPGTWEQD---TQN------GAHPTEPGKG Mflv_0325|M.gilvum_PYR-GCK ---LTTLAGDSFGGGPREPMLPGTWDPD--ATDDRHTDGRDGHDGHDGKE Mvan_0415|M.vanbaalenii_PYR-1 ---LTTLPGDPFGGGPKAPMLPGTWDPD--TEPD------ERHNHHDGKD MSMEG_0619|M.smegmatis_MC2_155 ---LTTLTGDTFDDRPVTPMLPGTWDGD--ENPA------PSPDDPEGGP TH_3569|M.thermoresistible__bu -------------------------------------------------- MAB_0047|M.abscessus_ATCC_1997 LVERDSGTAEALDGARTVPMLPTSWGTDSEHGPD--------RPAEGGSS MLBr_01991|M.leprae_Br4923 ----STPTGMAASTSSSVPLLPTTWITG-------------TSETAVHE- Mb0294|M.bovis_AF2122/97 K- Rv0286|M.tuberculosis_H37Rv K- MMAR_0545|M.marinum_M -- MUL_1208|M.ulcerans_Agy99 -- MAV_4867|M.avium_104 G- Mflv_0325|M.gilvum_PYR-GCK KP Mvan_0415|M.vanbaalenii_PYR-1 SQ MSMEG_0619|M.smegmatis_MC2_155 RR TH_3569|M.thermoresistible__bu -- MAB_0047|M.abscessus_ATCC_1997 T- MLBr_01991|M.leprae_Br4923 --