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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4372 | - | - | 100% (299) | Integrase, catalytic region |
| M. thermoresistible (build 8) | TH_3162 | - | 1e-58 | 51.10% (227) | PUTATIVE Integrase, catalytic region |
| M. thermoresistible (build 8) | TH_3317 | - | 2e-24 | 26.37% (292) | PUTATIVE Integrase, catalytic region |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2838c | - | 1e-29 | 29.02% (255) | transposase |
| M. gilvum PYR-GCK | Mflv_4642 | - | 2e-40 | 35.69% (269) | integrase catalytic subunit |
| M. tuberculosis H37Rv | Rv3475 | - | 6e-30 | 29.03% (279) | transposase IS6110 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2088 | - | 4e-28 | 30.86% (269) | transposase |
| M. marinum M | MMAR_3786 | - | 8e-33 | 33.94% (277) | transposase |
| M. avium 104 | MAV_5037 | - | 1e-32 | 34.05% (232) | transposase |
| M. smegmatis MC2 155 | MSMEG_1249 | - | 4e-33 | 32.48% (274) | ISMsm7, transposase orfB |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5060 | - | 1e-149 | 85.62% (292) | integrase catalytic subunit |
CLUSTAL 2.0.9 multiple sequence alignment
TH_4372|M.thermoresistible__bu --------------------------------------VSRFELIAAECA
Mvan_5060|M.vanbaalenii_PYR-1 --------------------------------------MSRFELIAAECA
Mflv_4642|M.gilvum_PYR-GCK -------------------------------------MSQKYAFIAAEHA
MAB_2088|M.abscessus_ATCC_1997 --------------------------------------------------
MSMEG_1249|M.smegmatis_MC2_155 ---------------------------------------MMYPLVLDLAA
MMAR_3786|M.marinum_M --------------------------------MPRQYSSSVRRQIVSRLR
Mb2838c|M.bovis_AF2122/97 --------------------------------------------------
Rv3475|M.tuberculosis_H37Rv AEALAAGQRRIAKGERDFKDRVGFLRGRARPASTLITRFIADHQGHREGP
MAV_5037|M.avium_104 --------------------------------------------------
TH_4372|M.thermoresistible__bu H--------HDVSKLAELLGVSRSGYYAWAARQRRVELS-----------
Mvan_5060|M.vanbaalenii_PYR-1 D--------HDIATLTELLGVSRSGYYAWEARQRRTEPT-----------
Mflv_4642|M.gilvum_PYR-GCK DGATFAGMAPTIVQMLKWLGVSKSGFYEWWGRPASAAMC-----------
MAB_2088|M.abscessus_ATCC_1997 -------------MTRRVLKLARQPYYRWRANPITDA-------------
MSMEG_1249|M.smegmatis_MC2_155 DG-------VPVTVTCRVLGFSTQAFYRWRKAPVSQR-------------
MMAR_3786|M.marinum_M VG-------EPVAVVAAETGVCQATLFRWKRQALIDAGVIEGTPSVEADE
Mb2838c|M.bovis_AF2122/97 ------------------MPIAPSTYYDHINREPSRRELR----------
Rv3475|M.tuberculosis_H37Rv DGLRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELR----------
MAV_5037|M.avium_104 --------------------MALSTYYDTKARVPSARALR----------
.. :
TH_4372|M.thermoresistible__bu ----------PRQQWRRDLEVKILAHWQASGRTYGSPRITADLHAEGVGV
Mvan_5060|M.vanbaalenii_PYR-1 ----------ARQQWRRDLEVKILAHWKESKRTYGSPRITADLHAAGVSV
Mflv_4642|M.gilvum_PYR-GCK ----------RRE----ELKLKIAALFTSFGAVYGYRRIHAELVRAGERV
MAB_2088|M.abscessus_ATCC_1997 -------------ELVEAYRANALFDAHGEDPEFGYRYLVEEAREAGEPM
MSMEG_1249|M.smegmatis_MC2_155 -------------DWDDAHLINAARNIHADDPAFGYRFIADELPAHGITA
MMAR_3786|M.marinum_M LAAAHKRIAQLEAELALTRDACDLFNEEAVVPPKRRRAITEGLIARGHSA
Mb2838c|M.bovis_AF2122/97 ---------------DGELKEHISRVHAANYGVYGARKVWLTLNREGIEV
Rv3475|M.tuberculosis_H37Rv ---------------DGELKEHISRVHAANYGVYGARKVWLTLNREGIEV
MAV_5037|M.avium_104 ---------------DAVLGPALCQLWKDNYCVYGARKLWKTARREGHDV
: *
TH_4372|M.thermoresistible__bu S----------------------ENTVAKIMAEMGIEGISPRTFKVKTTQ
Mvan_5060|M.vanbaalenii_PYR-1 S----------------------VNTVAAIMAEMGIEGISPRTFKVKTTV
Mflv_4642|M.gilvum_PYR-GCK G----------------------PELVRTLMRELNLVALQPKPYKR-TTI
MAB_2088|M.abscessus_ATCC_1997 A----------------------ERTAWRICSQQQLWSVFGKKRGKNGKP
MSMEG_1249|M.smegmatis_MC2_155 G----------------------ENRVARLCSQERIWSIFAKKRGLNRRS
MMAR_3786|M.marinum_M RSACRVTGLARSLLQYHRRRLVPDREVRRLIVADTITEIYQRSRGTYGRK
Mb2838c|M.bovis_AF2122/97 A----------------------RCTVERLMTKLGLSGTTRGKARRTTIA
Rv3475|M.tuberculosis_H37Rv A----------------------RCTVERLMTKLGLSGTTRGKARRTTIA
MAV_5037|M.avium_104 G----------------------RDQVARLMRAAGIEGVRRGKRVRTTKA
. : :
TH_4372|M.thermoresistible__bu VD---------------------------------------PTASFPPDR
Mvan_5060|M.vanbaalenii_PYR-1 VD---------------------------------------PAASFPPDR
Mflv_4642|M.gilvum_PYR-GCK AG---------------------------------------ESATAVPDL
MAB_2088|M.abscessus_ATCC_1997 ------------------------------------------GPPVHDDL
MSMEG_1249|M.smegmatis_MC2_155 ------------------------------------------GPPVHDDL
MMAR_3786|M.marinum_M RVRAALLADYDMNVNHKLVNSIMSEHGLYGLPRHGRRKPNLIGVHTPVDL
Mb2838c|M.bovis_AF2122/97 DP----------------------------------------ATARPADL
Rv3475|M.tuberculosis_H37Rv DP----------------------------------------ATARPADL
MAV_5037|M.avium_104 DP----------------------------------------AAARHPDL
*
TH_4372|M.thermoresistible__bu VGRAFDQGRLDAVWTSDITYLTCGEGDAYLCAIRDEHSRRVLGWSLADHM
Mvan_5060|M.vanbaalenii_PYR-1 VGRIFDQGRLDAVWTSDITYLTCGEGDAYLCAIRDEHSRRVLGWSVADHM
Mflv_4642|M.gilvum_PYR-GCK VARDFTADRPGVKLVGDITYIRTWAGWLYLATVIDCFNKEVIGYAMADHM
MAB_2088|M.abscessus_ATCC_1997 VQRDFTAETPNMLWLSDITEHYTGDGKLYLCAIKDAFSNRIVGYSIDSRM
MSMEG_1249|M.smegmatis_MC2_155 VQRQFSTHAPNQVWLADITEHRTDEGKLYLCALKDVYSNRIVGYSIDSRM
MMAR_3786|M.marinum_M INRRFTATKPNELWCTDITEHPARDGKVYCCAILDCFSRMIVARTFSTTA
Mb2838c|M.bovis_AF2122/97 VQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTM
Rv3475|M.tuberculosis_H37Rv VQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTM
MAV_5037|M.avium_104 VHRNFAAAAPNQLWVTDLTFVPTWAGVAYVCFIIDAHSRMIVGWRVASHM
: * * . *:* * * . : * . . ::. .
TH_4372|M.thermoresistible__bu RTELVEAAVDAAVFTRAGH----VAGTVMHSDRGSQFTSYDMAQACTRHG
Mvan_5060|M.vanbaalenii_PYR-1 RTELVEQAVDAAVFTRGGS----VAGTILHSDRGSQYTSHDLAKACSDHG
Mflv_4642|M.gilvum_PYR-GCK RTELATGALEMAARN-HAL----EPGCIMHTDRGTQYTSTDYAIKIADLD
MAB_2088|M.abscessus_ATCC_1997 KSRLATAALRNAVGR-RGV----VAGCVVHTDRGSQFRSRKFVQALHHHG
MSMEG_1249|M.smegmatis_MC2_155 KSSLAVAALEHAVAL-RSP----VA-TIVHSDRGSQFRSRKFVHALSHNG
MMAR_3786|M.marinum_M DTALVNNAVNMAVDH-RNR----SGPTILHADHGTQFTSWSFGENMRRWG
Mb2838c|M.bovis_AF2122/97 ATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAG
Rv3475|M.tuberculosis_H37Rv ATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAG
MAV_5037|M.avium_104 RTSMVLDALEMARWSRG----TTLQDLICHSDAGSQFTSIRYGERLAEIG
: :. *: * : *:* *:*: * .
TH_4372|M.thermoresistible__bu LLRSMGATGICWDNAGSESLWSTVKHEYYK----RHAFTTYANLTAGLDN
Mvan_5060|M.vanbaalenii_PYR-1 LRRSMGATGICWDNAGSESLWSTVKHEYYK----RHAFTTYANLTAGLDN
Mflv_4642|M.gilvum_PYR-GCK MRASLGRTGICWDNALAESFFAALKNERVH----HMVYPTRKKARADIAR
MAB_2088|M.abscessus_ATCC_1997 MVGSMGRVGAAGDNAAMESFFSLLQKNVLD----RRRWATREELRIAIVT
MSMEG_1249|M.smegmatis_MC2_155 LHGSMGRVGACGDNAAMESFFALLQRNVLD----RRRWTTRAELRLAIVT
MMAR_3786|M.marinum_M LLGSFGTVGDCFDNAAMESFWARLQVELLN----TRKWATTIELAAAMAD
Mb2838c|M.bovis_AF2122/97 IQPSVGAVGSSYDNALAETINGLYKTELIK-PGK--PWRSIEDVELATAR
Rv3475|M.tuberculosis_H37Rv IQPSVGAVGSSYDNALAETINGLYKTELIK-PGK--PWRSIEDVELATAR
MAV_5037|M.avium_104 AVPSIGTVGDSFDNALAETVNGYYKAELIYGPARTGPWKTVEDVELATLS
*.* .* . *** *:. . : : : : .
TH_4372|M.thermoresistible__bu YIR-FYNHERRHSSLGMISPIDFDLSLDILLSTQV------
Mvan_5060|M.vanbaalenii_PYR-1 YLH-YYNHDRRHSSLGMISPIDFEIAARINQQSS-------
Mflv_4642|M.gilvum_PYR-GCK YIELFYNRRRLHSALGYRTPHEVRIEYMNSQLAA-------
MAB_2088|M.abscessus_ATCC_1997 WIERTYHRRRRQGALGRLTPVEYEAIMTTTASQAA------
MSMEG_1249|M.smegmatis_MC2_155 WIERTYHRRRRQRALGRLTPIEFELLHTPVATAA-------
MMAR_3786|M.marinum_M YIDNFYNIERRHSYLGNISPTEFETLWTSTYSIPQLA----
Mb2838c|M.bovis_AF2122/97 WVD-WFNHRRLYQYCGDVPPVELEAAYYAQR--QRPAAG--
Rv3475|M.tuberculosis_H37Rv WVD-WFNHRRLYQYCGDVPPVELEAAYYAQR--QRPAAG--
MAV_5037|M.avium_104 WVY-WHNTSRLHSYLGDIPPAEFEAAFYDAYRTDQPLIGIQ
:: .: * * .* :